RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 SMRP1Q8NCR6 262 aa20.64■□□□□ 0.9
TSKU-201ENST00000333090 OR6X1Q8NH79 312 aa20.64■□□□□ 0.9
TSKU-201ENST00000333090 RTN4IP1Q8WWV3 396 aaPredicted RBP20.64■□□□□ 0.9
TSKU-201ENST00000333090 PBDC1Q9BVG4 233 aa20.64■□□□□ 0.9
TSKU-201ENST00000333090 PIGLQ9Y2B2 252 aa20.64■□□□□ 0.9
TSKU-201ENST00000333090 PUS1Q9Y606 427 aaKnown RBP eCLIP20.64■□□□□ 0.9
TSKU-201ENST00000333090 MSTNO14793 375 aa20.64■□□□□ 0.89
TSKU-201ENST00000333090 GPR137BO60478 399 aa20.64■□□□□ 0.89
TSKU-201ENST00000333090 PPP1CCP36873 323 aaKnown RBP20.64■□□□□ 0.89
TSKU-201ENST00000333090 NHLH2Q02577 135 aa20.64■□□□□ 0.89
TSKU-201ENST00000333090 CHAF1BQ13112 559 aa20.64■□□□□ 0.89
TSKU-201ENST00000333090 SLC16A14Q7RTX9 510 aa20.64■□□□□ 0.89
TSKU-201ENST00000333090 FAAP24Q9BTP7 215 aa20.64■□□□□ 0.89
TSKU-201ENST00000333090 NXT1Q9UKK6 140 aaKnown RBP20.64■□□□□ 0.89
TSKU-201ENST00000333090 DHRS3O75911 302 aa20.63■□□□□ 0.89
TSKU-201ENST00000333090 IGLV3-19P01714 112 aa20.63■□□□□ 0.89
TSKU-201ENST00000333090 RD3LP0DJH9 198 aa20.63■□□□□ 0.89
TSKU-201ENST00000333090 ZNF239Q16600 458 aaKnown RBP20.63■□□□□ 0.89
TSKU-201ENST00000333090 C14orf28Q4W4Y0 310 aa20.63■□□□□ 0.89
TSKU-201ENST00000333090 RTL6Q6ICC9 239 aa20.63■□□□□ 0.89
TSKU-201ENST00000333090 FAM213BQ8TBF2 198 aa20.63■□□□□ 0.89
TSKU-201ENST00000333090 STT3BQ8TCJ2 826 aa20.63■□□□□ 0.89
TSKU-201ENST00000333090 HAS2Q92819 552 aa20.63■□□□□ 0.89
TSKU-201ENST00000333090 CABIN1Q9Y6J0 2220 aa20.63■□□□□ 0.89
TSKU-201ENST00000333090 ASCL1P50553 236 aa20.63■□□□□ 0.89
TSKU-201ENST00000333090 CFHR1Q03591 330 aa20.63■□□□□ 0.89
TSKU-201ENST00000333090 PHLDA2Q53GA4 152 aa20.63■□□□□ 0.89
TSKU-201ENST00000333090 TMEM182Q6ZP80 229 aaPredicted RBP20.63■□□□□ 0.89
TSKU-201ENST00000333090 C17orf82Q86X59 251 aaPredicted RBP20.63■□□□□ 0.89
TSKU-201ENST00000333090 PLPP5Q8NEB5 264 aa20.63■□□□□ 0.89
TSKU-201ENST00000333090 AKR7LQ8NHP1 331 aa20.63■□□□□ 0.89
TSKU-201ENST00000333090 SPAG17Q6Q759 2223 aa20.63■□□□□ 0.89
TSKU-201ENST00000333090 ZNF728P0DKX0 622 aa20.62■□□□□ 0.89
TSKU-201ENST00000333090 TMEM187Q14656 261 aa20.62■□□□□ 0.89
TSKU-201ENST00000333090 OR52M1Q8NGK5 317 aa20.62■□□□□ 0.89
TSKU-201ENST00000333090 CHST5Q9GZS9 411 aa20.62■□□□□ 0.89
TSKU-201ENST00000333090 NAA60Q9H7X0 242 aa20.62■□□□□ 0.89
TSKU-201ENST00000333090 DECR2Q9NUI1 292 aa20.62■□□□□ 0.89
TSKU-201ENST00000333090 ZNF581Q9P0T4 197 aa20.62■□□□□ 0.89
TSKU-201ENST00000333090 ITGA3P26006 1051 aa20.62■□□□□ 0.89
TSKU-201ENST00000333090 CD38P28907 300 aa20.62■□□□□ 0.89
TSKU-201ENST00000333090 SUCLG1P53597 346 aaKnown RBP20.62■□□□□ 0.89
TSKU-201ENST00000333090 STARD6P59095 220 aa20.62■□□□□ 0.89
TSKU-201ENST00000333090 PPA1Q15181 289 aa20.62■□□□□ 0.89
TSKU-201ENST00000333090 TAF9Q16594 264 aa20.62■□□□□ 0.89
TSKU-201ENST00000333090 MALSU1Q96EH3 234 aa20.62■□□□□ 0.89
TSKU-201ENST00000333090 TMPRSS5Q9H3S3 457 aa20.62■□□□□ 0.89
TSKU-201ENST00000333090 ZDHHC8Q9ULC8 765 aa20.62■□□□□ 0.89
TSKU-201ENST00000333090 TRBV11-1A0A0K0K1C0 115 aa20.62■□□□□ 0.89
TSKU-201ENST00000333090 ANGPTL7O43827 346 aa20.62■□□□□ 0.89
TSKU-201ENST00000333090 CA11O75493 328 aa20.62■□□□□ 0.89
TSKU-201ENST00000333090 FBXW12Q6X9E4 464 aa20.62■□□□□ 0.89
TSKU-201ENST00000333090 CHRDQ9H2X0 955 aa20.62■□□□□ 0.89
TSKU-201ENST00000333090 METTL7AQ9H8H3 244 aa20.62■□□□□ 0.89
TSKU-201ENST00000333090 STRAPQ9Y3F4 350 aaKnown RBP20.62■□□□□ 0.89
TSKU-201ENST00000333090 OR2C1O95371 312 aa20.61■□□□□ 0.89
TSKU-201ENST00000333090 IFNA17P01571 189 aa20.61■□□□□ 0.89
TSKU-201ENST00000333090 RPS23P62266 143 aaKnown RBP20.61■□□□□ 0.89
TSKU-201ENST00000333090 SOHLH1Q5JUK2 328 aa20.61■□□□□ 0.89
TSKU-201ENST00000333090 D2HGDHQ8N465 521 aa20.61■□□□□ 0.89
TSKU-201ENST00000333090 OR5L1Q8NGL2 311 aa20.61■□□□□ 0.89
TSKU-201ENST00000333090 PP6455Q8WZ26 134 aa20.61■□□□□ 0.89
TSKU-201ENST00000333090 Q96M66 194 aa20.61■□□□□ 0.89
TSKU-201ENST00000333090 OXGR1Q96P68 337 aa20.61■□□□□ 0.89
TSKU-201ENST00000333090 SPSB2Q99619 263 aa20.61■□□□□ 0.89
TSKU-201ENST00000333090 RARRES2Q99969 163 aa20.61■□□□□ 0.89
TSKU-201ENST00000333090 PIGQQ9BRB3 760 aa20.61■□□□□ 0.89
TSKU-201ENST00000333090 FGF21Q9NSA1 209 aa20.61■□□□□ 0.89
TSKU-201ENST00000333090 OR5H15A6NDH6 313 aa20.61■□□□□ 0.89
TSKU-201ENST00000333090 PPIHO43447 177 aaKnown RBP20.61■□□□□ 0.89
TSKU-201ENST00000333090 GUCA1AP43080 201 aaPredicted RBP20.61■□□□□ 0.89
TSKU-201ENST00000333090 RAB5CP51148 216 aa20.61■□□□□ 0.89
TSKU-201ENST00000333090 ZNF133P52736 654 aaPredicted RBP20.61■□□□□ 0.89
TSKU-201ENST00000333090 CLDN17P56750 224 aa20.61■□□□□ 0.89
TSKU-201ENST00000333090 CLINT1Q14677 625 aa20.61■□□□□ 0.89
TSKU-201ENST00000333090 KCNMB1Q16558 191 aa20.61■□□□□ 0.89
TSKU-201ENST00000333090 GPR157Q5UAW9 335 aa20.61■□□□□ 0.89
TSKU-201ENST00000333090 FAM69BQ5VUD6 431 aa20.61■□□□□ 0.89
TSKU-201ENST00000333090 LRRC18Q8N456 261 aa20.61■□□□□ 0.89
TSKU-201ENST00000333090 HPSE2Q8WWQ2 592 aa20.61■□□□□ 0.89
TSKU-201ENST00000333090 B3GALT1Q9Y5Z6 326 aa20.61■□□□□ 0.89
TSKU-201ENST00000333090 FREM2Q5SZK8 3169 aa20.6■□□□□ 0.89
TSKU-201ENST00000333090 IGHV1OR21-1A0A087WYE8 117 aa20.6■□□□□ 0.89
TSKU-201ENST00000333090 NSG1A0A0A6YYJ2 146 aa20.6■□□□□ 0.89
TSKU-201ENST00000333090 ETV2O00321 342 aaPredicted RBP20.6■□□□□ 0.89
TSKU-201ENST00000333090 CHATP28329 748 aa20.6■□□□□ 0.89
TSKU-201ENST00000333090 RAB30Q15771 203 aa20.6■□□□□ 0.89
TSKU-201ENST00000333090 TMEM176BQ3YBM2 270 aaPredicted RBP20.6■□□□□ 0.89
TSKU-201ENST00000333090 CDCP2Q5VXM1 449 aa20.6■□□□□ 0.89
TSKU-201ENST00000333090 OR10G3Q8NGC4 313 aa20.6■□□□□ 0.89
TSKU-201ENST00000333090 NECAP2Q9NVZ3 263 aa20.6■□□□□ 0.89
TSKU-201ENST00000333090 AK3Q9UIJ7 227 aa20.6■□□□□ 0.89
TSKU-201ENST00000333090 ASCC3Q8N3C0 2202 aaKnown RBP20.6■□□□□ 0.89
TSKU-201ENST00000333090 GPR37O15354 613 aa20.6■□□□□ 0.89
TSKU-201ENST00000333090 IGLV3-1P01715 115 aa20.6■□□□□ 0.89
TSKU-201ENST00000333090 RPS10P46783 165 aaKnown RBP20.6■□□□□ 0.89
TSKU-201ENST00000333090 SUMF2Q8NBJ7 301 aa20.6■□□□□ 0.89
TSKU-201ENST00000333090 DYRK2Q92630 601 aa20.6■□□□□ 0.89
TSKU-201ENST00000333090 RCL1Q9Y2P8 373 aaKnown RBP20.6■□□□□ 0.89
TSKU-201ENST00000333090 V9GYS6 101 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms