RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 RSU1Q15404 277 aa13.39□□□□□ -0.27
BRCC3-201ENST00000330045 PEAR1Q5VY43 1037 aaPredicted RBP13.39□□□□□ -0.27
BRCC3-201ENST00000330045 TMEM268Q5VZI3 342 aa13.39□□□□□ -0.27
BRCC3-201ENST00000330045 GGNBP1Q5YKI7 109 aa13.39□□□□□ -0.27
BRCC3-201ENST00000330045 ZIC4Q8N9L1 334 aa13.39□□□□□ -0.27
BRCC3-201ENST00000330045 MRPL24Q96A35 216 aaKnown RBP13.39□□□□□ -0.27
BRCC3-201ENST00000330045 PRRX2Q99811 253 aa13.39□□□□□ -0.27
BRCC3-201ENST00000330045 WDR54Q9H977 334 aa13.39□□□□□ -0.27
BRCC3-201ENST00000330045 PROK2Q9HC23 129 aa13.39□□□□□ -0.27
BRCC3-201ENST00000330045 ZFP57Q9NU63 452 aa13.39□□□□□ -0.27
BRCC3-201ENST00000330045 DKKL1Q9UK85 242 aa13.39□□□□□ -0.27
BRCC3-201ENST00000330045 ASPMQ8IZT6 3477 aa13.39□□□□□ -0.27
BRCC3-201ENST00000330045 MSTNO14793 375 aa13.38□□□□□ -0.27
BRCC3-201ENST00000330045 ANGPTL7O43827 346 aa13.38□□□□□ -0.27
BRCC3-201ENST00000330045 JTBO76095 146 aa13.38□□□□□ -0.27
BRCC3-201ENST00000330045 SUCLG1P53597 346 aaKnown RBP13.38□□□□□ -0.27
BRCC3-201ENST00000330045 RRADP55042 308 aa13.38□□□□□ -0.27
BRCC3-201ENST00000330045 TAF9Q16594 264 aa13.38□□□□□ -0.27
BRCC3-201ENST00000330045 FAM27BQ5VT28 67 aa13.38□□□□□ -0.27
BRCC3-201ENST00000330045 BTNL8Q6UX41 500 aa13.38□□□□□ -0.27
BRCC3-201ENST00000330045 OR2AE1Q8NHA4 323 aa13.38□□□□□ -0.27
BRCC3-201ENST00000330045 SPSB1Q96BD6 273 aa13.38□□□□□ -0.27
BRCC3-201ENST00000330045 FBXL17Q9UF56 701 aa13.38□□□□□ -0.27
BRCC3-201ENST00000330045 NXT1Q9UKK6 140 aaKnown RBP13.38□□□□□ -0.27
BRCC3-201ENST00000330045 LSM5Q9Y4Y9 91 aaKnown RBP13.38□□□□□ -0.27
BRCC3-201ENST00000330045 FAM230AA0A1W2PPH8 454 aa13.38□□□□□ -0.27
BRCC3-201ENST00000330045 TNFSF11O14788 317 aa13.38□□□□□ -0.27
BRCC3-201ENST00000330045 SPRY1O43609 319 aaPredicted RBP13.38□□□□□ -0.27
BRCC3-201ENST00000330045 MRPS34P82930 218 aaKnown RBP13.38□□□□□ -0.27
BRCC3-201ENST00000330045 PARP11Q9NR21 331 aa13.38□□□□□ -0.27
BRCC3-201ENST00000330045 AK3Q9UIJ7 227 aa13.38□□□□□ -0.27
BRCC3-201ENST00000330045 A0A0J9YW62 118 aa13.37□□□□□ -0.27
BRCC3-201ENST00000330045 ZNF850A8MQ14 1090 aa13.37□□□□□ -0.27
BRCC3-201ENST00000330045 SGCEO43556 437 aa13.37□□□□□ -0.27
BRCC3-201ENST00000330045 GAPDHP04406 335 aaKnown RBP13.37□□□□□ -0.27
BRCC3-201ENST00000330045 FCGR3AP08637 254 aa13.37□□□□□ -0.27
BRCC3-201ENST00000330045 SFTA3P0C7M3 94 aa13.37□□□□□ -0.27
BRCC3-201ENST00000330045 CRYGSP22914 178 aa13.37□□□□□ -0.27
BRCC3-201ENST00000330045 RFC3P40938 356 aa13.37□□□□□ -0.27
BRCC3-201ENST00000330045 PIGPP57054 158 aa13.37□□□□□ -0.27
BRCC3-201ENST00000330045 TMEM33P57088 247 aa13.37□□□□□ -0.27
BRCC3-201ENST00000330045 C20orf196Q8IYI0 205 aa13.37□□□□□ -0.27
BRCC3-201ENST00000330045 REEP6Q96HR9 211 aa13.37□□□□□ -0.27
BRCC3-201ENST00000330045 IMMP1LQ96LU5 166 aa13.37□□□□□ -0.27
BRCC3-201ENST00000330045 CMSS1Q9BQ75 279 aaKnown RBP13.37□□□□□ -0.27
BRCC3-201ENST00000330045 LIME1Q9H400 295 aa13.37□□□□□ -0.27
BRCC3-201ENST00000330045 NECAP2Q9NVZ3 263 aa13.37□□□□□ -0.27
BRCC3-201ENST00000330045 PLA2G2EQ9NZK7 142 aa13.37□□□□□ -0.27
BRCC3-201ENST00000330045 HSF4Q9ULV5 492 aa13.37□□□□□ -0.27
BRCC3-201ENST00000330045 KCNIP3Q9Y2W7 256 aa13.37□□□□□ -0.27
BRCC3-201ENST00000330045 AGPAT2O15120 278 aa13.37□□□□□ -0.27
BRCC3-201ENST00000330045 SCGB1D2O95969 90 aa13.37□□□□□ -0.27
BRCC3-201ENST00000330045 CD5P06127 495 aa13.37□□□□□ -0.27
BRCC3-201ENST00000330045 FGF5P12034 268 aa13.37□□□□□ -0.27
BRCC3-201ENST00000330045 NFYBP25208 207 aa13.37□□□□□ -0.27
BRCC3-201ENST00000330045 OPRM1P35372 400 aa13.37□□□□□ -0.27
BRCC3-201ENST00000330045 SSR4P51571 173 aa13.37□□□□□ -0.27
BRCC3-201ENST00000330045 F2RL1P55085 397 aa13.37□□□□□ -0.27
BRCC3-201ENST00000330045 EXT1Q16394 746 aa13.37□□□□□ -0.27
BRCC3-201ENST00000330045 TOMM40LQ969M1 308 aa13.37□□□□□ -0.27
BRCC3-201ENST00000330045 AMDHD2Q9Y303 409 aa13.37□□□□□ -0.27
BRCC3-201ENST00000330045 HEXAP06865 529 aa13.36□□□□□ -0.27
BRCC3-201ENST00000330045 UMODP07911 640 aa13.36□□□□□ -0.27
BRCC3-201ENST00000330045 RAB13P51153 203 aa13.36□□□□□ -0.27
BRCC3-201ENST00000330045 RAC1P63000 192 aa13.36□□□□□ -0.27
BRCC3-201ENST00000330045 PDZK1IP1Q13113 114 aa13.36□□□□□ -0.27
BRCC3-201ENST00000330045 RAB35Q15286 201 aa13.36□□□□□ -0.27
BRCC3-201ENST00000330045 DHRS11Q6UWP2 260 aa13.36□□□□□ -0.27
BRCC3-201ENST00000330045 SRXN1Q9BYN0 137 aa13.36□□□□□ -0.27
BRCC3-201ENST00000330045 SMIM3Q9BZL3 60 aa13.36□□□□□ -0.27
BRCC3-201ENST00000330045 ZNF700Q9H0M5 742 aa13.36□□□□□ -0.27
BRCC3-201ENST00000330045 ARRDC1-AS1Q9H2J1 176 aa13.36□□□□□ -0.27
BRCC3-201ENST00000330045 ZNF581Q9P0T4 197 aa13.36□□□□□ -0.27
BRCC3-201ENST00000330045 LHX6Q9UPM6 363 aa13.36□□□□□ -0.27
BRCC3-201ENST00000330045 PTRH2Q9Y3E5 179 aaKnown RBP13.36□□□□□ -0.27
BRCC3-201ENST00000330045 IGKV1-27A0A075B6S5 117 aa13.36□□□□□ -0.27
BRCC3-201ENST00000330045 COX6A1P12074 109 aa13.36□□□□□ -0.27
BRCC3-201ENST00000330045 DTYMKP23919 212 aa13.36□□□□□ -0.27
BRCC3-201ENST00000330045 CD80P33681 288 aa13.36□□□□□ -0.27
BRCC3-201ENST00000330045 CNN3Q15417 329 aaKnown RBP13.36□□□□□ -0.27
BRCC3-201ENST00000330045 FAM76BQ5HYJ3 339 aa13.36□□□□□ -0.27
BRCC3-201ENST00000330045 Q6ZRG5 221 aa13.36□□□□□ -0.27
BRCC3-201ENST00000330045 TMEM156Q8N614 296 aa13.36□□□□□ -0.27
BRCC3-201ENST00000330045 NTNG2Q96CW9 530 aa13.36□□□□□ -0.27
BRCC3-201ENST00000330045 SULT4A1Q9BR01 284 aa13.36□□□□□ -0.27
BRCC3-201ENST00000330045 PLEKHA2Q9HB19 425 aa13.36□□□□□ -0.27
BRCC3-201ENST00000330045 SYNGR3O43761 229 aa13.35□□□□□ -0.27
BRCC3-201ENST00000330045 KLK3P07288 261 aaPredicted RBP13.35□□□□□ -0.27
BRCC3-201ENST00000330045 SP9P0CG40 484 aa13.35□□□□□ -0.27
BRCC3-201ENST00000330045 ZNF728P0DKX0 622 aa13.35□□□□□ -0.27
BRCC3-201ENST00000330045 ID4P47928 161 aa13.35□□□□□ -0.27
BRCC3-201ENST00000330045 HOXA1P49639 335 aaPredicted RBP13.35□□□□□ -0.27
BRCC3-201ENST00000330045 RBP2P50120 134 aa13.35□□□□□ -0.27
BRCC3-201ENST00000330045 FAM3AP98173 230 aa13.35□□□□□ -0.27
BRCC3-201ENST00000330045 HGFACQ04756 655 aa13.35□□□□□ -0.27
BRCC3-201ENST00000330045 IL11RAQ14626 422 aa13.35□□□□□ -0.27
BRCC3-201ENST00000330045 SWI5Q1ZZU3 235 aa13.35□□□□□ -0.27
BRCC3-201ENST00000330045 ZNF528Q3MIS6 628 aa13.35□□□□□ -0.27
BRCC3-201ENST00000330045 SP6Q3SY56 376 aa13.35□□□□□ -0.27
BRCC3-201ENST00000330045 ABCA11PQ4W5N1 156 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms