RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 ANGPTL5Q86XS5 388 aa22.78■■□□□ 1.24
ATPAF1-201ENST00000329231 CALHM1Q8IU99 346 aa22.78■■□□□ 1.24
ATPAF1-201ENST00000329231 KIR3DL3Q8N743 410 aa22.78■■□□□ 1.24
ATPAF1-201ENST00000329231 GATAD2BQ8WXI9 593 aa22.78■■□□□ 1.24
ATPAF1-201ENST00000329231 NRIP2Q9BQI9 281 aa22.78■■□□□ 1.24
ATPAF1-201ENST00000329231 MAB21L2Q9Y586 359 aa22.78■■□□□ 1.24
ATPAF1-201ENST00000329231 SOX21Q9Y651 276 aaPredicted RBP22.78■■□□□ 1.24
ATPAF1-201ENST00000329231 RFPL4AA6NLU0 287 aa22.77■■□□□ 1.24
ATPAF1-201ENST00000329231 RFPL4AL1F8VTS6 287 aa22.77■■□□□ 1.24
ATPAF1-201ENST00000329231 C12orf54Q6X4T0 127 aa22.77■■□□□ 1.24
ATPAF1-201ENST00000329231 ZNRF1Q8ND25 227 aa22.77■■□□□ 1.24
ATPAF1-201ENST00000329231 TMEM185AQ8NFB2 350 aa22.77■■□□□ 1.24
ATPAF1-201ENST00000329231 OR52I1Q8NGK6 324 aa22.77■■□□□ 1.24
ATPAF1-201ENST00000329231 LHX4Q969G2 390 aa22.77■■□□□ 1.24
ATPAF1-201ENST00000329231 BORCS8Q96FH0 119 aa22.77■■□□□ 1.24
ATPAF1-201ENST00000329231 ERVK13-1Q9NX77 482 aa22.77■■□□□ 1.24
ATPAF1-201ENST00000329231 ZNF20P17024 532 aa22.76■■□□□ 1.23
ATPAF1-201ENST00000329231 MRPL28Q13084 256 aaKnown RBP22.76■■□□□ 1.23
ATPAF1-201ENST00000329231 ALKBH1Q13686 389 aaKnown RBP22.76■■□□□ 1.23
ATPAF1-201ENST00000329231 C8orf59Q8N0T1 100 aaPredicted RBP22.76■■□□□ 1.23
ATPAF1-201ENST00000329231 ZDHHC16Q969W1 377 aa22.76■■□□□ 1.23
ATPAF1-201ENST00000329231 DUX5Q96PT3 197 aa22.76■■□□□ 1.23
ATPAF1-201ENST00000329231 HES4Q9HCC6 221 aa22.76■■□□□ 1.23
ATPAF1-201ENST00000329231 HHLA2Q9UM44 414 aa22.76■■□□□ 1.23
ATPAF1-201ENST00000329231 IGHV1-69DA0A0B4J2H0 117 aa22.75■■□□□ 1.23
ATPAF1-201ENST00000329231 TMEM89A2RUT3 159 aa22.75■■□□□ 1.23
ATPAF1-201ENST00000329231 H0YJX3 145 aa22.75■■□□□ 1.23
ATPAF1-201ENST00000329231 CLDN34H7C241 214 aa22.75■■□□□ 1.23
ATPAF1-201ENST00000329231 SLC1A7O00341 560 aa22.75■■□□□ 1.23
ATPAF1-201ENST00000329231 IGHV1-69P01742 117 aa22.75■■□□□ 1.23
ATPAF1-201ENST00000329231 GNAO1P09471 354 aa22.75■■□□□ 1.23
ATPAF1-201ENST00000329231 PRDX2P32119 198 aa22.75■■□□□ 1.23
ATPAF1-201ENST00000329231 CAPZA1P52907 286 aa22.75■■□□□ 1.23
ATPAF1-201ENST00000329231 DEFB112Q30KQ8 113 aa22.75■■□□□ 1.23
ATPAF1-201ENST00000329231 RUSC1-AS1Q66K80 236 aa22.75■■□□□ 1.23
ATPAF1-201ENST00000329231 VMO1Q7Z5L0 202 aa22.75■■□□□ 1.23
ATPAF1-201ENST00000329231 ZNF561Q8N587 486 aa22.75■■□□□ 1.23
ATPAF1-201ENST00000329231 CD177Q8N6Q3 437 aa22.75■■□□□ 1.23
ATPAF1-201ENST00000329231 ZNF676Q8N7Q3 588 aa22.75■■□□□ 1.23
ATPAF1-201ENST00000329231 DNAAF1Q8NEP3 725 aa22.75■■□□□ 1.23
ATPAF1-201ENST00000329231 TFAP2CQ92754 450 aa22.75■■□□□ 1.23
ATPAF1-201ENST00000329231 SLC25A28Q96A46 364 aa22.75■■□□□ 1.23
ATPAF1-201ENST00000329231 ADAT3Q96EY9 351 aaPredicted RBP22.75■■□□□ 1.23
ATPAF1-201ENST00000329231 C1orf147Q96MC9 270 aaPredicted RBP22.75■■□□□ 1.23
ATPAF1-201ENST00000329231 PRDM13Q9H4Q3 707 aa22.75■■□□□ 1.23
ATPAF1-201ENST00000329231 FGF20Q9NP95 211 aaPredicted RBP22.75■■□□□ 1.23
ATPAF1-201ENST00000329231 A0A1W2PQ09 198 aa22.74■■□□□ 1.23
ATPAF1-201ENST00000329231 OR4C45A6NMZ5 311 aa22.74■■□□□ 1.23
ATPAF1-201ENST00000329231 RPSAP08865 295 aaKnown RBP22.74■■□□□ 1.23
ATPAF1-201ENST00000329231 COMPP49747 757 aaPredicted RBP22.74■■□□□ 1.23
ATPAF1-201ENST00000329231 ERVK11-1P61568 191 aa22.74■■□□□ 1.23
ATPAF1-201ENST00000329231 UTS2BQ765I0 119 aa22.74■■□□□ 1.23
ATPAF1-201ENST00000329231 FGGYQ96C11 551 aa22.74■■□□□ 1.23
ATPAF1-201ENST00000329231 ISG20L2Q9H9L3 353 aaKnown RBP22.74■■□□□ 1.23
ATPAF1-201ENST00000329231 IGKV1-27A0A075B6S5 117 aa22.73■■□□□ 1.23
ATPAF1-201ENST00000329231 TRBV23-1A0A0A0MS06 115 aa22.73■■□□□ 1.23
ATPAF1-201ENST00000329231 MDFIC2A0A1B0GVS7 189 aa22.73■■□□□ 1.23
ATPAF1-201ENST00000329231 IRGMA1A4Y4 181 aa22.73■■□□□ 1.23
ATPAF1-201ENST00000329231 PRKACBP22694 351 aa22.73■■□□□ 1.23
ATPAF1-201ENST00000329231 RBP2P50120 134 aa22.73■■□□□ 1.23
ATPAF1-201ENST00000329231 ATP1B3P54709 279 aa22.73■■□□□ 1.23
ATPAF1-201ENST00000329231 SLC9A3R2Q15599 337 aa22.73■■□□□ 1.23
ATPAF1-201ENST00000329231 C1orf122Q6ZSJ8 110 aa22.73■■□□□ 1.23
ATPAF1-201ENST00000329231 BATF2Q8N1L9 274 aa22.73■■□□□ 1.23
ATPAF1-201ENST00000329231 OR13C3Q8NGS6 347 aa22.73■■□□□ 1.23
ATPAF1-201ENST00000329231 HAVCR2Q8TDQ0 301 aa22.73■■□□□ 1.23
ATPAF1-201ENST00000329231 ZNF649Q9BS31 505 aa22.73■■□□□ 1.23
ATPAF1-201ENST00000329231 JAM3Q9BX67 310 aa22.73■■□□□ 1.23
ATPAF1-201ENST00000329231 VCX3BQ9H321 246 aa22.73■■□□□ 1.23
ATPAF1-201ENST00000329231 NOX4Q9NPH5 578 aa22.73■■□□□ 1.23
ATPAF1-201ENST00000329231 KNG1P01042 644 aa22.72■■□□□ 1.23
ATPAF1-201ENST00000329231 RNASE1P07998 156 aaKnown RBP22.72■■□□□ 1.23
ATPAF1-201ENST00000329231 ATF1P18846 271 aa22.72■■□□□ 1.23
ATPAF1-201ENST00000329231 GBX2P52951 348 aaPredicted RBP22.72■■□□□ 1.23
ATPAF1-201ENST00000329231 AQP4P55087 323 aa22.72■■□□□ 1.23
ATPAF1-201ENST00000329231 RIPK1Q13546 671 aa22.72■■□□□ 1.23
ATPAF1-201ENST00000329231 METAP1DQ6UB28 335 aaPredicted RBP22.72■■□□□ 1.23
ATPAF1-201ENST00000329231 CEP19Q96LK0 163 aa22.72■■□□□ 1.23
ATPAF1-201ENST00000329231 ELL3Q9HB65 397 aaPredicted RBP22.72■■□□□ 1.23
ATPAF1-201ENST00000329231 OR14J1Q9UGF5 321 aa22.72■■□□□ 1.23
ATPAF1-201ENST00000329231 M0R1W7 72 aa22.71■■□□□ 1.23
ATPAF1-201ENST00000329231 OCM2P0CE71 109 aa22.71■■□□□ 1.23
ATPAF1-201ENST00000329231 OCMP0CE72 109 aaPredicted RBP22.71■■□□□ 1.23
ATPAF1-201ENST00000329231 DCKP27707 260 aa22.71■■□□□ 1.23
ATPAF1-201ENST00000329231 BLMHQ13867 455 aa22.71■■□□□ 1.23
ATPAF1-201ENST00000329231 SLC25A26Q70HW3 274 aa22.71■■□□□ 1.23
ATPAF1-201ENST00000329231 OR10AC1Q8NH08 325 aa22.71■■□□□ 1.23
ATPAF1-201ENST00000329231 FBLIM1Q8WUP2 373 aa22.71■■□□□ 1.23
ATPAF1-201ENST00000329231 SPSB1Q96BD6 273 aa22.71■■□□□ 1.23
ATPAF1-201ENST00000329231 SIRT7Q9NRC8 400 aa22.71■■□□□ 1.23
ATPAF1-201ENST00000329231 MTCH1Q9NZJ7 389 aa22.71■■□□□ 1.23
ATPAF1-201ENST00000329231 IGKV1-9A0A0C4DH69 117 aa22.7■■□□□ 1.22
ATPAF1-201ENST00000329231 TMEM212A6NML5 194 aa22.7■■□□□ 1.22
ATPAF1-201ENST00000329231 CCDC159P0C7I6 412 aa22.7■■□□□ 1.22
ATPAF1-201ENST00000329231 AZGP1P25311 298 aaKnown RBP22.7■■□□□ 1.22
ATPAF1-201ENST00000329231 MTCP1P56278 107 aa22.7■■□□□ 1.22
ATPAF1-201ENST00000329231 GUCA2AQ02747 115 aa22.7■■□□□ 1.22
ATPAF1-201ENST00000329231 LHFPL2Q6ZUX7 228 aa22.7■■□□□ 1.22
ATPAF1-201ENST00000329231 PDZD9Q8IXQ8 264 aa22.7■■□□□ 1.22
ATPAF1-201ENST00000329231 Q8N7P7 452 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms