RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 ZNF708P17019 499 aa11.27□□□□□ -0.61
HMGCS1-201ENST00000325110 RBP2P50120 134 aa11.27□□□□□ -0.61
HMGCS1-201ENST00000325110 NOVA1P51513 510 aaKnown RBP11.27□□□□□ -0.61
HMGCS1-201ENST00000325110 RAB5BP61020 215 aa11.27□□□□□ -0.61
HMGCS1-201ENST00000325110 RPS18P62269 152 aaKnown RBP11.27□□□□□ -0.61
HMGCS1-201ENST00000325110 PP6455Q8WZ26 134 aa11.27□□□□□ -0.61
HMGCS1-201ENST00000325110 ERGIC1Q969X5 290 aa11.27□□□□□ -0.61
HMGCS1-201ENST00000325110 KIRREL1Q96J84 757 aa11.27□□□□□ -0.61
HMGCS1-201ENST00000325110 PAPOLGQ9BWT3 736 aaKnown RBP11.27□□□□□ -0.61
HMGCS1-201ENST00000325110 ANXA10Q9UJ72 324 aa11.27□□□□□ -0.61
HMGCS1-201ENST00000325110 PUS1Q9Y606 427 aaKnown RBP eCLIP11.27□□□□□ -0.61
HMGCS1-201ENST00000325110 DIDO1Q9BTC0 2240 aaKnown RBP11.27□□□□□ -0.61
HMGCS1-201ENST00000325110 ZNF32P17041 273 aa11.27□□□□□ -0.61
HMGCS1-201ENST00000325110 ACKR3P25106 362 aa11.27□□□□□ -0.61
HMGCS1-201ENST00000325110 GNRHRP30968 328 aa11.27□□□□□ -0.61
HMGCS1-201ENST00000325110 TMEM182Q6ZP80 229 aaPredicted RBP11.27□□□□□ -0.61
HMGCS1-201ENST00000325110 P4HA3Q7Z4N8 544 aa11.27□□□□□ -0.61
HMGCS1-201ENST00000325110 LINC00518Q8N0U6 118 aa11.27□□□□□ -0.61
HMGCS1-201ENST00000325110 POC1AQ8NBT0 407 aa11.27□□□□□ -0.61
HMGCS1-201ENST00000325110 HAS2Q92819 552 aa11.27□□□□□ -0.61
HMGCS1-201ENST00000325110 CHST5Q9GZS9 411 aa11.27□□□□□ -0.61
HMGCS1-201ENST00000325110 WNT16Q9UBV4 365 aa11.27□□□□□ -0.61
HMGCS1-201ENST00000325110 OSGIN2Q9Y236 505 aa11.27□□□□□ -0.61
HMGCS1-201ENST00000325110 ESPL1Q14674 2120 aa11.27□□□□□ -0.61
HMGCS1-201ENST00000325110 A0A0J9YW62 118 aa11.26□□□□□ -0.61
HMGCS1-201ENST00000325110 FIGNL2A6NMB9 653 aa11.26□□□□□ -0.61
HMGCS1-201ENST00000325110 APOC1P02654 83 aa11.26□□□□□ -0.61
HMGCS1-201ENST00000325110 RGS19P49795 217 aa11.26□□□□□ -0.61
HMGCS1-201ENST00000325110 OR2B8PP59922 312 aa11.26□□□□□ -0.61
HMGCS1-201ENST00000325110 GNMTQ14749 295 aa11.26□□□□□ -0.61
HMGCS1-201ENST00000325110 ARL6IP1Q15041 203 aa11.26□□□□□ -0.61
HMGCS1-201ENST00000325110 ADAM5Q6NVV9 412 aa11.26□□□□□ -0.61
HMGCS1-201ENST00000325110 SLC5A7Q9GZV3 580 aa11.26□□□□□ -0.61
HMGCS1-201ENST00000325110 FAM212BQ9NTI7 297 aaPredicted RBP11.26□□□□□ -0.61
HMGCS1-201ENST00000325110 NECAP2Q9NVZ3 263 aa11.26□□□□□ -0.61
HMGCS1-201ENST00000325110 RBM7Q9Y580 266 aaKnown RBP11.26□□□□□ -0.61
HMGCS1-201ENST00000325110 ZNF98A6NK75 572 aa11.26□□□□□ -0.61
HMGCS1-201ENST00000325110 DBX1A6NMT0 343 aa11.26□□□□□ -0.61
HMGCS1-201ENST00000325110 C1orf196B1AJZ1 125 aa11.26□□□□□ -0.61
HMGCS1-201ENST00000325110 P04436 131 aa11.26□□□□□ -0.61
HMGCS1-201ENST00000325110 HKR1P10072 659 aa11.26□□□□□ -0.61
HMGCS1-201ENST00000325110 CCL2P13500 99 aa11.26□□□□□ -0.61
HMGCS1-201ENST00000325110 EPHA1P21709 976 aa11.26□□□□□ -0.61
HMGCS1-201ENST00000325110 PTGDSP41222 190 aa11.26□□□□□ -0.61
HMGCS1-201ENST00000325110 F2RL1P55085 397 aa11.26□□□□□ -0.61
HMGCS1-201ENST00000325110 SNRPEP62304 92 aaKnown RBP11.26□□□□□ -0.61
HMGCS1-201ENST00000325110 HNF4GQ14541 408 aa11.26□□□□□ -0.61
HMGCS1-201ENST00000325110 ZNF565Q8N9K5 539 aa11.26□□□□□ -0.61
HMGCS1-201ENST00000325110 TGIF2Q9GZN2 237 aa11.26□□□□□ -0.61
HMGCS1-201ENST00000325110 PNRC2Q9NPJ4 139 aaKnown RBP11.26□□□□□ -0.61
HMGCS1-201ENST00000325110 P4HTMQ9NXG6 502 aa11.26□□□□□ -0.61
HMGCS1-201ENST00000325110 A0A096LPE4 126 aa11.26□□□□□ -0.61
HMGCS1-201ENST00000325110 A0A1W2PPZ6 126 aa11.26□□□□□ -0.61
HMGCS1-201ENST00000325110 NPIPB13A6NJU9 1138 aa11.26□□□□□ -0.61
HMGCS1-201ENST00000325110 NPIPB4C9JG80 1138 aa11.26□□□□□ -0.61
HMGCS1-201ENST00000325110 EIF1BO60739 113 aaKnown RBP11.26□□□□□ -0.61
HMGCS1-201ENST00000325110 JTBO76095 146 aa11.26□□□□□ -0.61
HMGCS1-201ENST00000325110 CST4P01036 141 aa11.26□□□□□ -0.61
HMGCS1-201ENST00000325110 NRASP01111 189 aa11.26□□□□□ -0.61
HMGCS1-201ENST00000325110 ZNF44P15621 663 aa11.26□□□□□ -0.61
HMGCS1-201ENST00000325110 CARD18P57730 90 aa11.26□□□□□ -0.61
HMGCS1-201ENST00000325110 VAMP2P63027 116 aa11.26□□□□□ -0.61
HMGCS1-201ENST00000325110 ENDOGQ14249 297 aaKnown RBP11.26□□□□□ -0.61
HMGCS1-201ENST00000325110 IL34Q6ZMJ4 242 aa11.26□□□□□ -0.61
HMGCS1-201ENST00000325110 SLC25A26Q70HW3 274 aa11.26□□□□□ -0.61
HMGCS1-201ENST00000325110 DTX1Q86Y01 620 aa11.26□□□□□ -0.61
HMGCS1-201ENST00000325110 SGK3Q96BR1 496 aa11.26□□□□□ -0.61
HMGCS1-201ENST00000325110 SHDQ96IW2 340 aa11.26□□□□□ -0.61
HMGCS1-201ENST00000325110 RCL1Q9Y2P8 373 aaKnown RBP11.26□□□□□ -0.61
HMGCS1-201ENST00000325110 IGHV3-64DA0A0J9YX35 117 aa11.25□□□□□ -0.61
HMGCS1-201ENST00000325110 ONECUT2O95948 504 aa11.25□□□□□ -0.61
HMGCS1-201ENST00000325110 NAAAQ02083 359 aa11.25□□□□□ -0.61
HMGCS1-201ENST00000325110 MALLQ13021 153 aa11.25□□□□□ -0.61
HMGCS1-201ENST00000325110 CNN3Q15417 329 aaKnown RBP11.25□□□□□ -0.61
HMGCS1-201ENST00000325110 CEACAM16Q2WEN9 425 aa11.25□□□□□ -0.61
HMGCS1-201ENST00000325110 PRR18Q8N4B5 295 aa11.25□□□□□ -0.61
HMGCS1-201ENST00000325110 BSCL2Q96G97 398 aaPredicted RBP11.25□□□□□ -0.61
HMGCS1-201ENST00000325110 AQP10Q96PS8 301 aa11.25□□□□□ -0.61
HMGCS1-201ENST00000325110 CLCC1Q96S66 551 aa11.25□□□□□ -0.61
HMGCS1-201ENST00000325110 CEP250Q9BV73 2442 aa11.25□□□□□ -0.61
HMGCS1-201ENST00000325110 CCDC187A0A096LP49 1063 aa11.25□□□□□ -0.61
HMGCS1-201ENST00000325110 FGF16O43320 207 aa11.25□□□□□ -0.61
HMGCS1-201ENST00000325110 GLAP06280 429 aa11.25□□□□□ -0.61
HMGCS1-201ENST00000325110 JMJD7P0C870 316 aa11.25□□□□□ -0.61
HMGCS1-201ENST00000325110 ZNF133P52736 654 aaPredicted RBP11.25□□□□□ -0.61
HMGCS1-201ENST00000325110 TMEM268Q5VZI3 342 aa11.25□□□□□ -0.61
HMGCS1-201ENST00000325110 DHRS11Q6UWP2 260 aa11.25□□□□□ -0.61
HMGCS1-201ENST00000325110 C5orf24Q7Z6I8 188 aa11.25□□□□□ -0.61
HMGCS1-201ENST00000325110 CARFQ8N187 725 aa11.25□□□□□ -0.61
HMGCS1-201ENST00000325110 ADAMTS17Q8TE56 1095 aa11.25□□□□□ -0.61
HMGCS1-201ENST00000325110 SEC11CQ9BY50 192 aa11.25□□□□□ -0.61
HMGCS1-201ENST00000325110 PRRG4Q9BZD6 226 aa11.25□□□□□ -0.61
HMGCS1-201ENST00000325110 ZNF286AQ9HBT8 521 aa11.25□□□□□ -0.61
HMGCS1-201ENST00000325110 KCNJ16Q9NPI9 418 aa11.25□□□□□ -0.61
HMGCS1-201ENST00000325110 GVINP1Q7Z2Y8 2422 aa11.25□□□□□ -0.61
HMGCS1-201ENST00000325110 F8VVB4 439 aa11.25□□□□□ -0.61
HMGCS1-201ENST00000325110 F8VWA3 439 aa11.25□□□□□ -0.61
HMGCS1-201ENST00000325110 TXNL1O43396 289 aa11.25□□□□□ -0.61
HMGCS1-201ENST00000325110 ARG1P05089 322 aa11.25□□□□□ -0.61
HMGCS1-201ENST00000325110 EPHA8P29322 1005 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms