RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 SNTG1Q9NSN8 517 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 ACOXLQ9NUZ1 547 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 FAM206AQ9NX38 181 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 EMC3Q9P0I2 261 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 NUFIP1Q9UHK0 495 aaKnown RBP5.5□□□□□ -1.53
CSTF3-201ENST00000323959 TRBV2A0A0J9YWF9 115 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 A0A0U1RQV5 110 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 LOC100506127A0A0U1RQW1 187 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 ZNF878C9JN71 531 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 J3QW42 95 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 SULT1B1O43704 296 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 GSTZ1O43708 216 aaPredicted RBP5.49□□□□□ -1.53
CSTF3-201ENST00000323959 SLC43A1O75387 559 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 PTTG1O95997 202 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 CRYAAP02489 173 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 GYPBP06028 91 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 TFPIP10646 304 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 KIR3DL2P43630 455 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 CARD18P57730 90 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 CLRN1P58418 232 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 NANOS3P60323 173 aaKnown RBP5.49□□□□□ -1.53
CSTF3-201ENST00000323959 PSMA6P60900 246 aaKnown RBP5.49□□□□□ -1.53
CSTF3-201ENST00000323959 ZBTB37Q5TC79 503 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 TMEM244Q5VVB8 128 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 LRFN4Q6PJG9 635 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 PRSS45Q7RTY3 260 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 LRRTM1Q86UE6 522 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 CCDC28AQ8IWP9 274 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 TUSC5Q8IXB3 177 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 ELMOD2Q8IZ81 293 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 SLC38A6Q8IZM9 456 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 OR6K6Q8NGW6 343 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 OR5AK2Q8NH90 309 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 SRXN1Q9BYN0 137 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 COMMD4Q9H0A8 199 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 ABCG5Q9H222 651 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 CYSLTR2Q9NS75 346 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 PARPBPQ9NWS1 579 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 COA3Q9Y2R0 106 aaPredicted RBP5.49□□□□□ -1.53
CSTF3-201ENST00000323959 CSMD3Q7Z407 3707 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 A0A0A6YYH2 397 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 SHISA3A0PJX4 238 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 MEGF11A6BM72 1044 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 A6NJ64 397 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 ZNF726A6NNF4 738 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 C11orf98E9PRG8 122 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 AIPO00170 330 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 RAD51DO75771 328 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 HPXP02790 462 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 ALDOBP05062 364 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 MRPL3P09001 348 aaKnown RBP5.49□□□□□ -1.53
CSTF3-201ENST00000323959 HOXB1P14653 301 aaPredicted RBP5.49□□□□□ -1.53
CSTF3-201ENST00000323959 ZNF823P16415 610 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 MSR1P21757 451 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 EDNRAP25101 427 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 HOXD3P31249 432 aaPredicted RBP5.49□□□□□ -1.53
CSTF3-201ENST00000323959 TP53I3Q53FA7 332 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 TMEM225Q6GV28 225 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 OR5M10Q6IEU7 315 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 SFXN4Q6P4A7 337 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 DPY19L4Q7Z388 723 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 PARP16Q8N5Y8 322 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 ZNF511Q8NB15 262 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 C11orf40Q8WZ69 217 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 NSMAFQ92636 917 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 FOXRED1Q96CU9 486 aaPredicted RBP5.49□□□□□ -1.53
CSTF3-201ENST00000323959 SDHCQ99643 169 aaPredicted RBP5.49□□□□□ -1.53
CSTF3-201ENST00000323959 SRRQ9GZT4 340 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 PPP1R3EQ9H7J1 279 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 PLEKHA1Q9HB21 404 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 SRA1Q9HD15 236 aaKnown RBP5.49□□□□□ -1.53
CSTF3-201ENST00000323959 SLCO1C1Q9NYB5 712 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 GNG8Q9UK08 70 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 SPATA2Q9UM82 520 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 LRP12Q9Y561 859 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 LHFPL6Q9Y693 200 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 KMT2AQ03164 3969 aa5.49□□□□□ -1.53
CSTF3-201ENST00000323959 FAM25AB3EWG3 89 aa5.48□□□□□ -1.53
CSTF3-201ENST00000323959 FAM25CB3EWG5 89 aa5.48□□□□□ -1.53
CSTF3-201ENST00000323959 FAM25GB3EWG6 89 aa5.48□□□□□ -1.53
CSTF3-201ENST00000323959 M0R233 179 aa5.48□□□□□ -1.53
CSTF3-201ENST00000323959 LY6G6CO95867 125 aa5.48□□□□□ -1.53
CSTF3-201ENST00000323959 APOA1P02647 267 aa5.48□□□□□ -1.53
CSTF3-201ENST00000323959 SRMP19623 302 aa5.48□□□□□ -1.53
CSTF3-201ENST00000323959 RAB3BP20337 219 aa5.48□□□□□ -1.53
CSTF3-201ENST00000323959 AHCYP23526 432 aa5.48□□□□□ -1.53
CSTF3-201ENST00000323959 TNFSF8P32971 234 aa5.48□□□□□ -1.53
CSTF3-201ENST00000323959 NAA10P41227 235 aaPredicted RBP5.48□□□□□ -1.53
CSTF3-201ENST00000323959 KIR2DS4P43632 304 aa5.48□□□□□ -1.53
CSTF3-201ENST00000323959 CSNK1A1P48729 337 aa5.48□□□□□ -1.53
CSTF3-201ENST00000323959 MRPS10P82664 201 aaKnown RBP5.48□□□□□ -1.53
CSTF3-201ENST00000323959 SSBP1Q04837 148 aaKnown RBP5.48□□□□□ -1.53
CSTF3-201ENST00000323959 EIF2B1Q14232 305 aaKnown RBP5.48□□□□□ -1.53
CSTF3-201ENST00000323959 ENDOGQ14249 297 aaKnown RBP5.48□□□□□ -1.53
CSTF3-201ENST00000323959 HSD17B12Q53GQ0 312 aa5.48□□□□□ -1.53
CSTF3-201ENST00000323959 C1orf100Q5SVJ3 147 aa5.48□□□□□ -1.53
CSTF3-201ENST00000323959 ZNF100Q8IYN0 542 aa5.48□□□□□ -1.53
CSTF3-201ENST00000323959 NKAIN3Q8N8D7 197 aa5.48□□□□□ -1.53
CSTF3-201ENST00000323959 YIPF7Q8N8F6 280 aa5.48□□□□□ -1.53
CSTF3-201ENST00000323959 OR6N2Q8NGY6 317 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms