RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 TRAPPC2LH3BP13 241 aa13□□□□□ -0.33
PDLIM5-202ENST00000318007 J3QT63 122 aa13□□□□□ -0.33
PDLIM5-202ENST00000318007 CSTBP04080 98 aaKnown RBP13□□□□□ -0.33
PDLIM5-202ENST00000318007 EGR1P18146 543 aa13□□□□□ -0.33
PDLIM5-202ENST00000318007 CEBPDP49716 269 aaPredicted RBP13□□□□□ -0.33
PDLIM5-202ENST00000318007 PPOXP50336 477 aa13□□□□□ -0.33
PDLIM5-202ENST00000318007 UNC119Q13432 240 aa13□□□□□ -0.33
PDLIM5-202ENST00000318007 FAM76BQ5HYJ3 339 aa13□□□□□ -0.33
PDLIM5-202ENST00000318007 C1orf100Q5SVJ3 147 aa13□□□□□ -0.33
PDLIM5-202ENST00000318007 FAM166AQ6J272 317 aa13□□□□□ -0.33
PDLIM5-202ENST00000318007 NICN1Q9BSH3 213 aa13□□□□□ -0.33
PDLIM5-202ENST00000318007 EGLN1Q9GZT9 426 aa13□□□□□ -0.33
PDLIM5-202ENST00000318007 FN3KRPQ9HA64 309 aa13□□□□□ -0.33
PDLIM5-202ENST00000318007 ABCB9Q9NP78 766 aa13□□□□□ -0.33
PDLIM5-202ENST00000318007 DYSFO75923 2080 aa12.99□□□□□ -0.33
PDLIM5-202ENST00000318007 PRKACAP17612 351 aa12.99□□□□□ -0.33
PDLIM5-202ENST00000318007 TNFRSF1AP19438 455 aa12.99□□□□□ -0.33
PDLIM5-202ENST00000318007 GABRR1P24046 479 aa12.99□□□□□ -0.33
PDLIM5-202ENST00000318007 COL8A2P25067 703 aa12.99□□□□□ -0.33
PDLIM5-202ENST00000318007 FAM209AQ5JX71 171 aa12.99□□□□□ -0.33
PDLIM5-202ENST00000318007 RTN4RL2Q86UN3 420 aa12.99□□□□□ -0.33
PDLIM5-202ENST00000318007 IZUMO1Q8IYV9 350 aa12.99□□□□□ -0.33
PDLIM5-202ENST00000318007 DEFB108BQ8NET1 73 aa12.99□□□□□ -0.33
PDLIM5-202ENST00000318007 AP3S1Q92572 193 aa12.99□□□□□ -0.33
PDLIM5-202ENST00000318007 EMG1Q92979 244 aaKnown RBP12.99□□□□□ -0.33
PDLIM5-202ENST00000318007 C1orf147Q96MC9 270 aaPredicted RBP12.99□□□□□ -0.33
PDLIM5-202ENST00000318007 SELENOIQ9C0D9 397 aa12.99□□□□□ -0.33
PDLIM5-202ENST00000318007 RAB1BQ9H0U4 201 aa12.99□□□□□ -0.33
PDLIM5-202ENST00000318007 METTL9Q9H1A3 318 aa12.99□□□□□ -0.33
PDLIM5-202ENST00000318007 UNC79Q9P2D8 2635 aa12.98□□□□□ -0.33
PDLIM5-202ENST00000318007 A0A075B6Q4 140 aa12.98□□□□□ -0.33
PDLIM5-202ENST00000318007 IGHV1-69-2A0A0G2JMI3 117 aa12.98□□□□□ -0.33
PDLIM5-202ENST00000318007 HSPB6O14558 160 aa12.98□□□□□ -0.33
PDLIM5-202ENST00000318007 NXPH2O95156 264 aa12.98□□□□□ -0.33
PDLIM5-202ENST00000318007 GLRA1P23415 457 aa12.98□□□□□ -0.33
PDLIM5-202ENST00000318007 CD80P33681 288 aa12.98□□□□□ -0.33
PDLIM5-202ENST00000318007 SCN1BQ07699 218 aa12.98□□□□□ -0.33
PDLIM5-202ENST00000318007 MZT1Q08AG7 82 aa12.98□□□□□ -0.33
PDLIM5-202ENST00000318007 C14orf79Q96F83 325 aa12.98□□□□□ -0.33
PDLIM5-202ENST00000318007 PERPQ96FX8 193 aa12.98□□□□□ -0.33
PDLIM5-202ENST00000318007 CEP19Q96LK0 163 aa12.98□□□□□ -0.33
PDLIM5-202ENST00000318007 DIRC2Q96SL1 478 aa12.98□□□□□ -0.33
PDLIM5-202ENST00000318007 OR14J1Q9UGF5 321 aa12.98□□□□□ -0.33
PDLIM5-202ENST00000318007 EIF4EP06730 217 aaKnown RBP12.98□□□□□ -0.33
PDLIM5-202ENST00000318007 MGMTP16455 207 aa12.98□□□□□ -0.33
PDLIM5-202ENST00000318007 IL24Q13007 206 aa12.98□□□□□ -0.33
PDLIM5-202ENST00000318007 RIN1Q13671 783 aa12.98□□□□□ -0.33
PDLIM5-202ENST00000318007 TESK1Q15569 626 aa12.98□□□□□ -0.33
PDLIM5-202ENST00000318007 BRICD5Q6PL45 260 aa12.98□□□□□ -0.33
PDLIM5-202ENST00000318007 C20orf204Q6ZNR8 217 aa12.98□□□□□ -0.33
PDLIM5-202ENST00000318007 BIVMQ86UB2 503 aa12.98□□□□□ -0.33
PDLIM5-202ENST00000318007 MKXQ8IYA7 352 aa12.98□□□□□ -0.33
PDLIM5-202ENST00000318007 GCSAMQ8N6F7 178 aa12.98□□□□□ -0.33
PDLIM5-202ENST00000318007 ZMAT3Q9HA38 289 aaKnown RBP12.98□□□□□ -0.33
PDLIM5-202ENST00000318007 POLDIP2Q9Y2S7 368 aa12.98□□□□□ -0.33
PDLIM5-202ENST00000318007 ITPR2Q14571 2701 aa12.97□□□□□ -0.33
PDLIM5-202ENST00000318007 ANKRD17O75179 2603 aaKnown RBP12.97□□□□□ -0.33
PDLIM5-202ENST00000318007 FAM25AB3EWG3 89 aa12.97□□□□□ -0.33
PDLIM5-202ENST00000318007 FAM25CB3EWG5 89 aa12.97□□□□□ -0.33
PDLIM5-202ENST00000318007 FAM25GB3EWG6 89 aa12.97□□□□□ -0.33
PDLIM5-202ENST00000318007 KDM4BO94953 1096 aa12.97□□□□□ -0.33
PDLIM5-202ENST00000318007 GOSR1O95249 250 aa12.97□□□□□ -0.33
PDLIM5-202ENST00000318007 TAF9Q16594 264 aa12.97□□□□□ -0.33
PDLIM5-202ENST00000318007 PCGF3Q3KNV8 242 aa12.97□□□□□ -0.33
PDLIM5-202ENST00000318007 CROCCP3Q8IVE0 287 aa12.97□□□□□ -0.33
PDLIM5-202ENST00000318007 TBC1D15Q8TC07 691 aa12.97□□□□□ -0.33
PDLIM5-202ENST00000318007 YIPF5Q969M3 257 aa12.97□□□□□ -0.33
PDLIM5-202ENST00000318007 TMEM59Q9BXS4 323 aa12.97□□□□□ -0.33
PDLIM5-202ENST00000318007 ATG5Q9H1Y0 275 aa12.97□□□□□ -0.33
PDLIM5-202ENST00000318007 NARFLQ9H6Q4 476 aa12.97□□□□□ -0.33
PDLIM5-202ENST00000318007 ING3Q9NXR8 418 aa12.97□□□□□ -0.33
PDLIM5-202ENST00000318007 PTTG2Q9NZH5 202 aa12.97□□□□□ -0.33
PDLIM5-202ENST00000318007 GEMIN2O14893 280 aaKnown RBP12.96□□□□□ -0.33
PDLIM5-202ENST00000318007 SSX4O60224 188 aa12.96□□□□□ -0.33
PDLIM5-202ENST00000318007 BPNT1O95861 308 aa12.96□□□□□ -0.33
PDLIM5-202ENST00000318007 CD55P08174 381 aa12.96□□□□□ -0.33
PDLIM5-202ENST00000318007 IRF2P14316 349 aa12.96□□□□□ -0.33
PDLIM5-202ENST00000318007 DAOP14920 347 aa12.96□□□□□ -0.33
PDLIM5-202ENST00000318007 ELK1P19419 428 aa12.96□□□□□ -0.33
PDLIM5-202ENST00000318007 MPZP25189 248 aa12.96□□□□□ -0.33
PDLIM5-202ENST00000318007 SSTR2P30874 369 aa12.96□□□□□ -0.33
PDLIM5-202ENST00000318007 HFEQ30201 348 aa12.96□□□□□ -0.33
PDLIM5-202ENST00000318007 AVPI1Q5T686 147 aa12.96□□□□□ -0.33
PDLIM5-202ENST00000318007 ZNF525Q8N782 197 aa12.96□□□□□ -0.33
PDLIM5-202ENST00000318007 SLC25A38Q96DW6 304 aa12.96□□□□□ -0.33
PDLIM5-202ENST00000318007 PKIBQ9C010 78 aa12.96□□□□□ -0.33
PDLIM5-202ENST00000318007 DNAJB11Q9UBS4 358 aa12.96□□□□□ -0.33
PDLIM5-202ENST00000318007 ST3GAL6Q9Y274 331 aa12.96□□□□□ -0.33
PDLIM5-202ENST00000318007 PTBP3O95758 552 aaKnown RBP12.96□□□□□ -0.34
PDLIM5-202ENST00000318007 ADH4P08319 380 aa12.96□□□□□ -0.34
PDLIM5-202ENST00000318007 PGA5P0DJD9 388 aa12.96□□□□□ -0.34
PDLIM5-202ENST00000318007 GTF2F2P13984 249 aa12.96□□□□□ -0.34
PDLIM5-202ENST00000318007 VEGFCP49767 419 aa12.96□□□□□ -0.34
PDLIM5-202ENST00000318007 MOGAT2Q3SYC2 334 aa12.96□□□□□ -0.34
PDLIM5-202ENST00000318007 CDH26Q8IXH8 852 aa12.96□□□□□ -0.34
PDLIM5-202ENST00000318007 OSR2Q8N2R0 312 aa12.96□□□□□ -0.34
PDLIM5-202ENST00000318007 CELF2-AS1Q8N7Q2 184 aa12.96□□□□□ -0.34
PDLIM5-202ENST00000318007 OR51T1Q8NGJ9 327 aa12.96□□□□□ -0.34
PDLIM5-202ENST00000318007 CST11Q9H112 138 aa12.96□□□□□ -0.34
PDLIM5-202ENST00000318007 TLNRD1Q9H1K6 362 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms