RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 NME2P22392 152 aa10.79□□□□□ -0.68
RNF4-201ENST00000314289 THBS4P35443 961 aa10.79□□□□□ -0.68
RNF4-201ENST00000314289 DRAM2Q6UX65 266 aa10.79□□□□□ -0.68
RNF4-201ENST00000314289 C6orf201Q7Z4U5 140 aa10.79□□□□□ -0.68
RNF4-201ENST00000314289 MDS2Q8NDY4 140 aa10.79□□□□□ -0.68
RNF4-201ENST00000314289 SSC4DQ8WTU2 575 aa10.79□□□□□ -0.68
RNF4-201ENST00000314289 PIGCQ92535 297 aa10.79□□□□□ -0.68
RNF4-201ENST00000314289 DNTTIP1Q9H147 329 aa10.79□□□□□ -0.68
RNF4-201ENST00000314289 ATPIF1Q9UII2 106 aa10.79□□□□□ -0.68
RNF4-201ENST00000314289 MCTS1Q9ULC4 181 aaKnown RBP10.79□□□□□ -0.68
RNF4-201ENST00000314289 PLEKHA6Q9Y2H5 1048 aa10.79□□□□□ -0.68
RNF4-201ENST00000314289 A0A0A6YYH2 397 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 OR14I1A6ND48 311 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 A6NJ64 397 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 AKR1C4P17516 323 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 SLC10A1Q14973 349 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 ZNF766Q5HY98 468 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 UNQ6126/PRO20091Q6UXV3 157 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 PIP4P1Q86T03 277 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 ADAD2Q8NCV1 583 aaKnown RBP10.78□□□□□ -0.68
RNF4-201ENST00000314289 OR1S2Q8NGQ3 325 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 OR4K15Q8NH41 348 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 CASTOR1Q8WTX7 329 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 BARX1Q9HBU1 254 aaPredicted RBP10.78□□□□□ -0.68
RNF4-201ENST00000314289 PRR13Q9NZ81 148 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 COMMD9Q9P000 198 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 UPB1Q9UBR1 384 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 ZNF629Q9UEG4 869 aaPredicted RBP10.78□□□□□ -0.68
RNF4-201ENST00000314289 PRSS50Q9UI38 385 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 PCDHB10Q9UN67 800 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 KMT2EQ8IZD2 1858 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 C5orf49A4QMS7 147 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 MPTX1A8MV57 137 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 C3orf80F5H4A9 247 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 KLRC4-KLRK1H3BQV0 150 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 ABCD4O14678 606 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 HTR3BO95264 441 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 FARS2O95363 451 aaKnown RBP10.78□□□□□ -0.68
RNF4-201ENST00000314289 EDN3P14138 238 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 MPPED2Q15777 294 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 TAF9Q16594 264 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 GUCA2BQ16661 112 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 MICBQ29980 383 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 BHLHE23Q8NDY6 225 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 FDCSPQ8NFU4 85 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 CCDC107Q8WV48 283 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 DYRK2Q92630 601 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 ZNF552Q9H707 407 aaPredicted RBP10.78□□□□□ -0.68
RNF4-201ENST00000314289 KLF13Q9Y2Y9 288 aaPredicted RBP10.78□□□□□ -0.68
RNF4-201ENST00000314289 A0A1W2PR80 420 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 ATG12O94817 140 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 F12P00748 615 aaPredicted RBP10.78□□□□□ -0.68
RNF4-201ENST00000314289 HLA-AP01891 365 aaKnown RBP10.78□□□□□ -0.68
RNF4-201ENST00000314289 CD74P04233 296 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 IFNA6P05013 189 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 MMP7P09237 267 aaPredicted RBP10.78□□□□□ -0.68
RNF4-201ENST00000314289 PRF1P14222 555 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 CD46P15529 392 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 AGTR1P30556 359 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 SNU13P55769 128 aaKnown RBP10.78□□□□□ -0.68
RNF4-201ENST00000314289 MCEMP1Q8IX19 187 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 PUSL1Q8N0Z8 303 aaKnown RBP10.78□□□□□ -0.68
RNF4-201ENST00000314289 MARCH1Q8TCQ1 289 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 PP6455Q8WZ26 134 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 HAS2Q92819 552 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 USB1Q9BQ65 265 aaKnown RBP10.78□□□□□ -0.68
RNF4-201ENST00000314289 CST11Q9H112 138 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 FN3KRPQ9HA64 309 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 ZNF701Q9NV72 531 aaPredicted RBP10.78□□□□□ -0.68
RNF4-201ENST00000314289 CRIM1Q9NZV1 1036 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 SPRR3Q9UBC9 169 aa10.78□□□□□ -0.68
RNF4-201ENST00000314289 ANKRD11Q6UB99 2663 aaPredicted RBP10.77□□□□□ -0.68
RNF4-201ENST00000314289 TNRC6AQ8NDV7 1962 aaKnown RBP10.77□□□□□ -0.68
RNF4-201ENST00000314289 A0A0D9SG52 128 aa10.77□□□□□ -0.68
RNF4-201ENST00000314289 FAM221AA4D161 298 aa10.77□□□□□ -0.68
RNF4-201ENST00000314289 F5H0A9 414 aaPredicted RBP10.77□□□□□ -0.68
RNF4-201ENST00000314289 VAMP1P23763 118 aa10.77□□□□□ -0.68
RNF4-201ENST00000314289 CD34P28906 385 aa10.77□□□□□ -0.68
RNF4-201ENST00000314289 GSK3AP49840 483 aa10.77□□□□□ -0.68
RNF4-201ENST00000314289 NPY4RP50391 375 aa10.77□□□□□ -0.68
RNF4-201ENST00000314289 DHRS2Q13268 280 aa10.77□□□□□ -0.68
RNF4-201ENST00000314289 RIPPLY2Q5TAB7 128 aa10.77□□□□□ -0.68
RNF4-201ENST00000314289 MOB3CQ70IA8 216 aa10.77□□□□□ -0.68
RNF4-201ENST00000314289 ZNF100Q8IYN0 542 aa10.77□□□□□ -0.68
RNF4-201ENST00000314289 GCNT2Q8N0V5 402 aa10.77□□□□□ -0.68
RNF4-201ENST00000314289 OR5T2Q8NGG2 359 aa10.77□□□□□ -0.68
RNF4-201ENST00000314289 APH1AQ96BI3 265 aa10.77□□□□□ -0.68
RNF4-201ENST00000314289 URM1Q9BTM9 101 aaKnown RBP10.77□□□□□ -0.68
RNF4-201ENST00000314289 LHX6Q9UPM6 363 aa10.77□□□□□ -0.68
RNF4-201ENST00000314289 APOC1P02654 83 aa10.77□□□□□ -0.69
RNF4-201ENST00000314289 PVALBP20472 110 aaPredicted RBP10.77□□□□□ -0.69
RNF4-201ENST00000314289 ATP1B3P54709 279 aa10.77□□□□□ -0.69
RNF4-201ENST00000314289 FAM3AP98173 230 aa10.77□□□□□ -0.69
RNF4-201ENST00000314289 SSBP1Q04837 148 aaKnown RBP10.77□□□□□ -0.69
RNF4-201ENST00000314289 IGFBP7Q16270 282 aa10.77□□□□□ -0.69
RNF4-201ENST00000314289 HIKESHIQ53FT3 197 aa10.77□□□□□ -0.69
RNF4-201ENST00000314289 C2CD4CQ8TF44 421 aa10.77□□□□□ -0.69
RNF4-201ENST00000314289 BCL2L11O43521 198 aa10.76□□□□□ -0.69
RNF4-201ENST00000314289 NGFP01138 241 aa10.76□□□□□ -0.69
RNF4-201ENST00000314289 CHRM2P08172 466 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms