RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 TNFSF10P50591 281 aa11.97□□□□□ -0.49
DDX54-202ENST00000314045 P2RY6Q15077 328 aa11.97□□□□□ -0.49
DDX54-202ENST00000314045 C1orf185Q5T7R7 199 aa11.97□□□□□ -0.49
DDX54-202ENST00000314045 MS4A3Q96HJ5 214 aa11.97□□□□□ -0.49
DDX54-202ENST00000314045 RNF150Q9ULK6 438 aa11.97□□□□□ -0.49
DDX54-202ENST00000314045 ST8SIA3O43173 380 aa11.96□□□□□ -0.49
DDX54-202ENST00000314045 LYPD3O95274 346 aa11.96□□□□□ -0.49
DDX54-202ENST00000314045 CLDN1O95832 211 aa11.96□□□□□ -0.49
DDX54-202ENST00000314045 NGFP01138 241 aa11.96□□□□□ -0.49
DDX54-202ENST00000314045 PPP3CBP16298 524 aa11.96□□□□□ -0.49
DDX54-202ENST00000314045 S100A11P31949 105 aa11.96□□□□□ -0.49
DDX54-202ENST00000314045 POU4F3Q15319 338 aa11.96□□□□□ -0.49
DDX54-202ENST00000314045 OR10AD1Q8NGE0 317 aa11.96□□□□□ -0.49
DDX54-202ENST00000314045 LRRC29Q8WV35 223 aa11.96□□□□□ -0.49
DDX54-202ENST00000314045 SCNM1Q9BWG6 230 aa11.96□□□□□ -0.49
DDX54-202ENST00000314045 KCNJ16Q9NPI9 418 aa11.96□□□□□ -0.49
DDX54-202ENST00000314045 TAAR3PQ9P1P4 343 aa11.96□□□□□ -0.49
DDX54-202ENST00000314045 KIF25Q9UIL4 384 aa11.96□□□□□ -0.49
DDX54-202ENST00000314045 TMEM30CPA0ZSE6 113 aa11.96□□□□□ -0.49
DDX54-202ENST00000314045 MEX3AA1L020 520 aaKnown RBP11.96□□□□□ -0.49
DDX54-202ENST00000314045 TSPAN4O14817 238 aa11.96□□□□□ -0.49
DDX54-202ENST00000314045 AGPAT2O15120 278 aa11.96□□□□□ -0.49
DDX54-202ENST00000314045 ZNHIT1O43257 154 aa11.96□□□□□ -0.49
DDX54-202ENST00000314045 IGHMP01871 453 aa11.96□□□□□ -0.49
DDX54-202ENST00000314045 LGALS4P56470 323 aa11.96□□□□□ -0.49
DDX54-202ENST00000314045 OR2B11Q5JQS5 317 aa11.96□□□□□ -0.49
DDX54-202ENST00000314045 FAM185AQ8N0U4 392 aa11.96□□□□□ -0.49
DDX54-202ENST00000314045 BMPERQ8N8U9 685 aa11.96□□□□□ -0.49
DDX54-202ENST00000314045 OR4A16Q8NH70 328 aa11.96□□□□□ -0.49
DDX54-202ENST00000314045 GPX8Q8TED1 209 aa11.96□□□□□ -0.49
DDX54-202ENST00000314045 ARL11Q969Q4 196 aa11.96□□□□□ -0.49
DDX54-202ENST00000314045 OR2J1Q9GZK6 312 aa11.96□□□□□ -0.49
DDX54-202ENST00000314045 ESRP2Q9H6T0 727 aaKnown RBP11.96□□□□□ -0.49
DDX54-202ENST00000314045 TRBV5-5A0A0J9YX44 114 aa11.96□□□□□ -0.5
DDX54-202ENST00000314045 CDX4O14627 284 aaPredicted RBP11.96□□□□□ -0.5
DDX54-202ENST00000314045 CDIPTO14735 213 aa11.96□□□□□ -0.5
DDX54-202ENST00000314045 SSX4O60224 188 aa11.96□□□□□ -0.5
DDX54-202ENST00000314045 HOXD4P09016 255 aaPredicted RBP11.96□□□□□ -0.5
DDX54-202ENST00000314045 SUCLG1P53597 346 aaKnown RBP11.96□□□□□ -0.5
DDX54-202ENST00000314045 TNFAIP6P98066 277 aaPredicted RBP11.96□□□□□ -0.5
DDX54-202ENST00000314045 SHEQ5VZ18 495 aa11.96□□□□□ -0.5
DDX54-202ENST00000314045 ZNRF4Q8WWF5 429 aa11.96□□□□□ -0.5
DDX54-202ENST00000314045 UPRTQ96BW1 309 aa11.96□□□□□ -0.5
DDX54-202ENST00000314045 TSNAXQ99598 290 aaKnown RBP11.96□□□□□ -0.5
DDX54-202ENST00000314045 S100A6P06703 90 aa11.95□□□□□ -0.5
DDX54-202ENST00000314045 IL3RAP26951 378 aa11.95□□□□□ -0.5
DDX54-202ENST00000314045 GPR12P47775 334 aa11.95□□□□□ -0.5
DDX54-202ENST00000314045 LYG2Q86SG7 212 aa11.95□□□□□ -0.5
DDX54-202ENST00000314045 OR8U1Q8NH10 309 aa11.95□□□□□ -0.5
DDX54-202ENST00000314045 GALMQ96C23 342 aa11.95□□□□□ -0.5
DDX54-202ENST00000314045 NKX2-1P43699 371 aaPredicted RBP11.95□□□□□ -0.5
DDX54-202ENST00000314045 EFNB2P52799 333 aa11.95□□□□□ -0.5
DDX54-202ENST00000314045 C19orf57Q0VDD7 668 aa11.95□□□□□ -0.5
DDX54-202ENST00000314045 TMEM128Q5BJH2 165 aa11.95□□□□□ -0.5
DDX54-202ENST00000314045 ZNF362Q5T0B9 420 aaPredicted RBP11.95□□□□□ -0.5
DDX54-202ENST00000314045 TMEM268Q5VZI3 342 aa11.95□□□□□ -0.5
DDX54-202ENST00000314045 RFESDQ8TAC1 157 aa11.95□□□□□ -0.5
DDX54-202ENST00000314045 PRR7Q8TB68 274 aa11.95□□□□□ -0.5
DDX54-202ENST00000314045 LRFN3Q9BTN0 628 aa11.95□□□□□ -0.5
DDX54-202ENST00000314045 CXXC4Q9H2H0 198 aa11.95□□□□□ -0.5
DDX54-202ENST00000314045 FBXO7Q9Y3I1 522 aa11.95□□□□□ -0.5
DDX54-202ENST00000314045 TNFSF12O43508 249 aa11.95□□□□□ -0.5
DDX54-202ENST00000314045 NPIPB7O75200 414 aa11.95□□□□□ -0.5
DDX54-202ENST00000314045 ZNF92Q03936 586 aa11.95□□□□□ -0.5
DDX54-202ENST00000314045 ZNF79Q15937 498 aa11.95□□□□□ -0.5
DDX54-202ENST00000314045 LRRC75AQ8NAA5 344 aa11.95□□□□□ -0.5
DDX54-202ENST00000314045 EDARADDQ8WWZ3 215 aa11.95□□□□□ -0.5
DDX54-202ENST00000314045 OPN3Q9H1Y3 402 aaPredicted RBP11.95□□□□□ -0.5
DDX54-202ENST00000314045 FREM3P0C091 2139 aa11.95□□□□□ -0.5
DDX54-202ENST00000314045 POM121CA8CG34 1229 aa11.95□□□□□ -0.5
DDX54-202ENST00000314045 ZNF724A8MTY0 619 aa11.95□□□□□ -0.5
DDX54-202ENST00000314045 CCL21O00585 134 aa11.95□□□□□ -0.5
DDX54-202ENST00000314045 PIN1P1O15428 100 aa11.95□□□□□ -0.5
DDX54-202ENST00000314045 NXPH3O95157 252 aa11.95□□□□□ -0.5
DDX54-202ENST00000314045 IFNA10P01566 189 aa11.95□□□□□ -0.5
DDX54-202ENST00000314045 SLC25A53Q5H9E4 307 aa11.95□□□□□ -0.5
DDX54-202ENST00000314045 NLRC3Q7RTR2 1065 aa11.95□□□□□ -0.5
DDX54-202ENST00000314045 OR5A2Q8NGI9 324 aa11.95□□□□□ -0.5
DDX54-202ENST00000314045 CCL17Q92583 94 aa11.95□□□□□ -0.5
DDX54-202ENST00000314045 PBDC1Q9BVG4 233 aa11.95□□□□□ -0.5
DDX54-202ENST00000314045 HEYLQ9NQ87 328 aaPredicted RBP11.95□□□□□ -0.5
DDX54-202ENST00000314045 ANKRD20A5PA0PJZ0 165 aa11.94□□□□□ -0.5
DDX54-202ENST00000314045 C3orf80F5H4A9 247 aa11.94□□□□□ -0.5
DDX54-202ENST00000314045 IFNA1P01562 189 aa11.94□□□□□ -0.5
DDX54-202ENST00000314045 IL5P05113 134 aa11.94□□□□□ -0.5
DDX54-202ENST00000314045 CD3EP07766 207 aa11.94□□□□□ -0.5
DDX54-202ENST00000314045 CALCRP30988 508 aa11.94□□□□□ -0.5
DDX54-202ENST00000314045 RPS27AP62979 156 aaKnown RBP11.94□□□□□ -0.5
DDX54-202ENST00000314045 UBA52P62987 128 aaKnown RBP11.94□□□□□ -0.5
DDX54-202ENST00000314045 PLPPR2Q96GM1 343 aa11.94□□□□□ -0.5
DDX54-202ENST00000314045 ZNF407Q9C0G0 2248 aa11.94□□□□□ -0.5
DDX54-202ENST00000314045 LTBP2Q14767 1821 aa11.94□□□□□ -0.5
DDX54-202ENST00000314045 OR5H14A6NHG9 310 aa11.94□□□□□ -0.5
DDX54-202ENST00000314045 BLOC1S1P78537 153 aa11.94□□□□□ -0.5
DDX54-202ENST00000314045 PDZK1IP1Q13113 114 aa11.94□□□□□ -0.5
DDX54-202ENST00000314045 CLINT1Q14677 625 aa11.94□□□□□ -0.5
DDX54-202ENST00000314045 SLC36A1Q7Z2H8 476 aa11.94□□□□□ -0.5
DDX54-202ENST00000314045 COMMD7Q86VX2 200 aa11.94□□□□□ -0.5
DDX54-202ENST00000314045 MSL2Q9HCI7 577 aa11.94□□□□□ -0.5
DDX54-202ENST00000314045 PCDHGA9Q9Y5G4 932 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms