RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 SNTG1Q9NSN8 517 aa20.51■□□□□ 0.87
HOXC9-201ENST00000303450 RASL12Q9NYN1 266 aa20.51■□□□□ 0.87
HOXC9-201ENST00000303450 ZNF469Q96JG9 3925 aaPredicted RBP20.5■□□□□ 0.87
HOXC9-201ENST00000303450 TRAPPC2LH3BP13 241 aa20.5■□□□□ 0.87
HOXC9-201ENST00000303450 ANGPTL7O43827 346 aa20.5■□□□□ 0.87
HOXC9-201ENST00000303450 ZP1P60852 638 aa20.5■□□□□ 0.87
HOXC9-201ENST00000303450 LRRTM1Q86UE6 522 aa20.5■□□□□ 0.87
HOXC9-201ENST00000303450 ZSCAN4Q8NAM6 433 aaPredicted RBP20.5■□□□□ 0.87
HOXC9-201ENST00000303450 TNFAIP8L1Q8WVP5 186 aa20.5■□□□□ 0.87
HOXC9-201ENST00000303450 NKX3-1Q99801 234 aaPredicted RBP20.5■□□□□ 0.87
HOXC9-201ENST00000303450 HEXAP06865 529 aa20.49■□□□□ 0.87
HOXC9-201ENST00000303450 GADD45AP24522 165 aa20.49■□□□□ 0.87
HOXC9-201ENST00000303450 FGF9P31371 208 aaPredicted RBP20.49■□□□□ 0.87
HOXC9-201ENST00000303450 SMIM21Q3B7S5 101 aa20.49■□□□□ 0.87
HOXC9-201ENST00000303450 FAM90A1Q86YD7 464 aa20.49■□□□□ 0.87
HOXC9-201ENST00000303450 CDH26Q8IXH8 852 aa20.49■□□□□ 0.87
HOXC9-201ENST00000303450 Q8IYB0 196 aa20.49■□□□□ 0.87
HOXC9-201ENST00000303450 SAXO1Q8IYX7 474 aa20.49■□□□□ 0.87
HOXC9-201ENST00000303450 CHCHD6Q9BRQ6 235 aa20.49■□□□□ 0.87
HOXC9-201ENST00000303450 SMURF1Q9HCE7 757 aa20.49■□□□□ 0.87
HOXC9-201ENST00000303450 TXNL4BQ9NX01 149 aaKnown RBP20.49■□□□□ 0.87
HOXC9-201ENST00000303450 GSTK1Q9Y2Q3 226 aa20.49■□□□□ 0.87
HOXC9-201ENST00000303450 ADRA2CP18825 462 aa20.48■□□□□ 0.87
HOXC9-201ENST00000303450 PTGFRP43088 359 aa20.48■□□□□ 0.87
HOXC9-201ENST00000303450 OR3A4PP47883 348 aa20.48■□□□□ 0.87
HOXC9-201ENST00000303450 TIMM50Q3ZCQ8 353 aa20.48■□□□□ 0.87
HOXC9-201ENST00000303450 ACP7Q6ZNF0 438 aa20.48■□□□□ 0.87
HOXC9-201ENST00000303450 C12orf43Q96C57 262 aaKnown RBP20.48■□□□□ 0.87
HOXC9-201ENST00000303450 YIPF6Q96EC8 236 aa20.48■□□□□ 0.87
HOXC9-201ENST00000303450 NLKQ9UBE8 527 aa20.48■□□□□ 0.87
HOXC9-201ENST00000303450 CR1P17927 2039 aa20.48■□□□□ 0.87
HOXC9-201ENST00000303450 LOC100506127A0A0U1RQW1 187 aa20.48■□□□□ 0.87
HOXC9-201ENST00000303450 CEACAM18A8MTB9 384 aa20.48■□□□□ 0.87
HOXC9-201ENST00000303450 NDUFA2O43678 99 aa20.48■□□□□ 0.87
HOXC9-201ENST00000303450 GYPAP02724 150 aa20.48■□□□□ 0.87
HOXC9-201ENST00000303450 BCL3P20749 454 aa20.48■□□□□ 0.87
HOXC9-201ENST00000303450 MYL9P24844 172 aa20.48■□□□□ 0.87
HOXC9-201ENST00000303450 ERVK11-1P61568 191 aa20.48■□□□□ 0.87
HOXC9-201ENST00000303450 GLT8D1Q68CQ7 371 aa20.48■□□□□ 0.87
HOXC9-201ENST00000303450 DCDC5Q6ZRR9 648 aa20.48■□□□□ 0.87
HOXC9-201ENST00000303450 PXT1Q8NFP0 134 aa20.48■□□□□ 0.87
HOXC9-201ENST00000303450 OR5T2Q8NGG2 359 aa20.48■□□□□ 0.87
HOXC9-201ENST00000303450 OR13F1Q8NGS4 319 aa20.48■□□□□ 0.87
HOXC9-201ENST00000303450 FOXRED1Q96CU9 486 aaPredicted RBP20.48■□□□□ 0.87
HOXC9-201ENST00000303450 RAB39BQ96DA2 213 aa20.48■□□□□ 0.87
HOXC9-201ENST00000303450 COX4I2Q96KJ9 171 aa20.48■□□□□ 0.87
HOXC9-201ENST00000303450 S100A13Q99584 98 aa20.48■□□□□ 0.87
HOXC9-201ENST00000303450 ZNF665Q9H7R5 613 aa20.48■□□□□ 0.87
HOXC9-201ENST00000303450 ELL3Q9HB65 397 aaPredicted RBP20.48■□□□□ 0.87
HOXC9-201ENST00000303450 MED13LQ71F56 2210 aa20.47■□□□□ 0.87
HOXC9-201ENST00000303450 IGKV1-12A0A0C4DH73 117 aa20.47■□□□□ 0.87
HOXC9-201ENST00000303450 F8VVB4 439 aa20.47■□□□□ 0.87
HOXC9-201ENST00000303450 F8VWA3 439 aa20.47■□□□□ 0.87
HOXC9-201ENST00000303450 IGKV1D-12P01611 117 aa20.47■□□□□ 0.87
HOXC9-201ENST00000303450 IGHV2-5P01817 119 aa20.47■□□□□ 0.87
HOXC9-201ENST00000303450 NPBWR2P48146 333 aa20.47■□□□□ 0.87
HOXC9-201ENST00000303450 LMO4P61968 165 aa20.47■□□□□ 0.87
HOXC9-201ENST00000303450 C18orf12Q96KH6 178 aa20.47■□□□□ 0.87
HOXC9-201ENST00000303450 UQCC2Q9BRT2 126 aa20.47■□□□□ 0.87
HOXC9-201ENST00000303450 CNTD2Q9H8S5 307 aa20.47■□□□□ 0.87
HOXC9-201ENST00000303450 PATZ1Q9HBE1 687 aaKnown RBP20.47■□□□□ 0.87
HOXC9-201ENST00000303450 HES4Q9HCC6 221 aa20.47■□□□□ 0.87
HOXC9-201ENST00000303450 RBFOX1Q9NWB1 397 aaKnown RBP20.47■□□□□ 0.87
HOXC9-201ENST00000303450 MIOXQ9UGB7 285 aa20.47■□□□□ 0.87
HOXC9-201ENST00000303450 ING4Q9UNL4 249 aa20.47■□□□□ 0.87
HOXC9-201ENST00000303450 CELSR1Q9NYQ6 3014 aa20.46■□□□□ 0.87
HOXC9-201ENST00000303450 TRAV1-2A0A0B4J238 106 aa20.46■□□□□ 0.87
HOXC9-201ENST00000303450 OR2AT4A6NND4 320 aa20.46■□□□□ 0.87
HOXC9-201ENST00000303450 KDM4BO94953 1096 aa20.46■□□□□ 0.87
HOXC9-201ENST00000303450 TFAP2AP05549 437 aa20.46■□□□□ 0.87
HOXC9-201ENST00000303450 CD99P14209 185 aa20.46■□□□□ 0.87
HOXC9-201ENST00000303450 RPS2P15880 293 aaKnown RBP20.46■□□□□ 0.87
HOXC9-201ENST00000303450 IL2RGP31785 369 aa20.46■□□□□ 0.87
HOXC9-201ENST00000303450 C1QL2Q7Z5L3 287 aa20.46■□□□□ 0.87
HOXC9-201ENST00000303450 EMG1Q92979 244 aaKnown RBP20.46■□□□□ 0.87
HOXC9-201ENST00000303450 AK6Q9Y3D8 172 aaKnown RBP20.46■□□□□ 0.87
HOXC9-201ENST00000303450 RSU1Q15404 277 aa20.45■□□□□ 0.86
HOXC9-201ENST00000303450 STUMQ69YW2 141 aa20.45■□□□□ 0.86
HOXC9-201ENST00000303450 LYPD2Q6UXB3 125 aa20.45■□□□□ 0.86
HOXC9-201ENST00000303450 GDPGP1Q6ZNW5 385 aa20.45■□□□□ 0.86
HOXC9-201ENST00000303450 FAM58AQ8N1B3 248 aa20.45■□□□□ 0.86
HOXC9-201ENST00000303450 KCTD7Q96MP8 289 aa20.45■□□□□ 0.86
HOXC9-201ENST00000303450 TMUB1Q9BVT8 246 aa20.45■□□□□ 0.86
HOXC9-201ENST00000303450 SCOCQ9UIL1 159 aa20.45■□□□□ 0.86
HOXC9-201ENST00000303450 ACANP16112 2415 aa20.45■□□□□ 0.86
HOXC9-201ENST00000303450 PDCD5O14737 125 aa20.44■□□□□ 0.86
HOXC9-201ENST00000303450 ADAM20O43506 726 aa20.44■□□□□ 0.86
HOXC9-201ENST00000303450 AIREO43918 545 aa20.44■□□□□ 0.86
HOXC9-201ENST00000303450 CDRT1O95170 752 aa20.44■□□□□ 0.86
HOXC9-201ENST00000303450 SFTPBP07988 381 aa20.44■□□□□ 0.86
HOXC9-201ENST00000303450 PSG2P11465 335 aa20.44■□□□□ 0.86
HOXC9-201ENST00000303450 ALDH3B2P48448 385 aa20.44■□□□□ 0.86
HOXC9-201ENST00000303450 TMEM249Q2WGJ8 235 aa20.44■□□□□ 0.86
HOXC9-201ENST00000303450 FIP1L1Q6UN15 594 aaKnown RBP20.44■□□□□ 0.86
HOXC9-201ENST00000303450 NLRC3Q7RTR2 1065 aa20.44■□□□□ 0.86
HOXC9-201ENST00000303450 LYPD6Q86Y78 171 aa20.44■□□□□ 0.86
HOXC9-201ENST00000303450 METTL9Q9H1A3 318 aa20.44■□□□□ 0.86
HOXC9-201ENST00000303450 RHOFQ9HBH0 211 aa20.44■□□□□ 0.86
HOXC9-201ENST00000303450 MRPS28Q9Y2Q9 187 aaKnown RBP20.44■□□□□ 0.86
HOXC9-201ENST00000303450 YLPM1P49750 1951 aaKnown RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms