RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 MRGPRX4Q96LA9 322 aa11.74□□□□□ -0.53
CASC4-201ENST00000299957 NIPSNAP3BQ9BS92 247 aa11.74□□□□□ -0.53
CASC4-201ENST00000299957 HEATR1Q9H583 2144 aaKnown RBP11.74□□□□□ -0.53
CASC4-201ENST00000299957 SIT1Q9Y3P8 196 aa11.74□□□□□ -0.53
CASC4-201ENST00000299957 BPTFQ12830 3046 aa11.74□□□□□ -0.53
CASC4-201ENST00000299957 LIPT2A6NK58 231 aa11.74□□□□□ -0.53
CASC4-201ENST00000299957 ANKRD30BLA7E2S9 258 aa11.74□□□□□ -0.53
CASC4-201ENST00000299957 SIRPB1O00241 398 aa11.74□□□□□ -0.53
CASC4-201ENST00000299957 MUC1P15941 1255 aaPredicted RBP11.74□□□□□ -0.53
CASC4-201ENST00000299957 EIF1P41567 113 aaKnown RBP11.74□□□□□ -0.53
CASC4-201ENST00000299957 EDDM3AQ14507 147 aa11.74□□□□□ -0.53
CASC4-201ENST00000299957 C1QL2Q7Z5L3 287 aa11.74□□□□□ -0.53
CASC4-201ENST00000299957 ANKRD37Q7Z713 158 aa11.74□□□□□ -0.53
CASC4-201ENST00000299957 ZDHHC22Q8N966 263 aa11.74□□□□□ -0.53
CASC4-201ENST00000299957 DTWD2Q8NBA8 298 aa11.74□□□□□ -0.53
CASC4-201ENST00000299957 OR5B12Q96R08 314 aa11.74□□□□□ -0.53
CASC4-201ENST00000299957 OBP2BQ9NPH6 170 aa11.74□□□□□ -0.53
CASC4-201ENST00000299957 WBP1LQ9NX94 342 aa11.74□□□□□ -0.53
CASC4-201ENST00000299957 CLEC1BQ9P126 229 aa11.74□□□□□ -0.53
CASC4-201ENST00000299957 A6NCN8 305 aa11.73□□□□□ -0.53
CASC4-201ENST00000299957 TUBAL3A6NHL2 446 aa11.73□□□□□ -0.53
CASC4-201ENST00000299957 MST1P26927 711 aa11.73□□□□□ -0.53
CASC4-201ENST00000299957 MPPED2Q15777 294 aa11.73□□□□□ -0.53
CASC4-201ENST00000299957 OR8U1Q8NH10 309 aa11.73□□□□□ -0.53
CASC4-201ENST00000299957 SP7Q8TDD2 431 aaPredicted RBP11.73□□□□□ -0.53
CASC4-201ENST00000299957 PIK3IP1Q96FE7 263 aa11.73□□□□□ -0.53
CASC4-201ENST00000299957 OCIAD1Q9NX40 245 aa11.73□□□□□ -0.53
CASC4-201ENST00000299957 CHD7Q9P2D1 2997 aa11.73□□□□□ -0.53
CASC4-201ENST00000299957 OR2M5A3KFT3 312 aa11.73□□□□□ -0.53
CASC4-201ENST00000299957 OR2A4O95047 310 aa11.73□□□□□ -0.53
CASC4-201ENST00000299957 ICAM2P13598 275 aa11.73□□□□□ -0.53
CASC4-201ENST00000299957 IL2RGP31785 369 aa11.73□□□□□ -0.53
CASC4-201ENST00000299957 CLDN15P56746 228 aa11.73□□□□□ -0.53
CASC4-201ENST00000299957 UBE2NP61088 152 aaKnown RBP11.73□□□□□ -0.53
CASC4-201ENST00000299957 NHLH2Q02577 135 aa11.73□□□□□ -0.53
CASC4-201ENST00000299957 PLAURQ03405 335 aa11.73□□□□□ -0.53
CASC4-201ENST00000299957 SLC36A1Q7Z2H8 476 aa11.73□□□□□ -0.53
CASC4-201ENST00000299957 OR2A7Q96R45 310 aa11.73□□□□□ -0.53
CASC4-201ENST00000299957 RASL10BQ96S79 203 aa11.73□□□□□ -0.53
CASC4-201ENST00000299957 PLA2G3Q9NZ20 509 aa11.73□□□□□ -0.53
CASC4-201ENST00000299957 ZNF98A6NK75 572 aa11.73□□□□□ -0.53
CASC4-201ENST00000299957 FGF8P55075 233 aaPredicted RBP11.73□□□□□ -0.53
CASC4-201ENST00000299957 S100A12P80511 92 aa11.73□□□□□ -0.53
CASC4-201ENST00000299957 ECH1Q13011 328 aa11.73□□□□□ -0.53
CASC4-201ENST00000299957 DPPA2Q7Z7J5 298 aa11.73□□□□□ -0.53
CASC4-201ENST00000299957 LDLRAD3Q86YD5 345 aa11.73□□□□□ -0.53
CASC4-201ENST00000299957 ZSCAN4Q8NAM6 433 aaPredicted RBP11.73□□□□□ -0.53
CASC4-201ENST00000299957 LOC102725191A0A1B0GVB3 256 aa11.72□□□□□ -0.53
CASC4-201ENST00000299957 APLNRP35414 380 aa11.72□□□□□ -0.53
CASC4-201ENST00000299957 SRSF3P84103 164 aaKnown RBP11.72□□□□□ -0.53
CASC4-201ENST00000299957 ANKRD55Q3KP44 614 aa11.72□□□□□ -0.53
CASC4-201ENST00000299957 AWAT1Q58HT5 328 aa11.72□□□□□ -0.53
CASC4-201ENST00000299957 SPINK9Q5DT21 86 aa11.72□□□□□ -0.53
CASC4-201ENST00000299957 JMJD6Q6NYC1 403 aaPredicted RBP11.72□□□□□ -0.53
CASC4-201ENST00000299957 PRSS54Q6PEW0 395 aa11.72□□□□□ -0.53
CASC4-201ENST00000299957 RNF133Q8WVZ7 376 aa11.72□□□□□ -0.53
CASC4-201ENST00000299957 GCM1Q9NP62 436 aa11.72□□□□□ -0.53
CASC4-201ENST00000299957 TRBV5-7A0A0A0MS05 114 aa11.72□□□□□ -0.53
CASC4-201ENST00000299957 GJE1A6NN92 205 aa11.72□□□□□ -0.53
CASC4-201ENST00000299957 MS4A18H0YCH9 400 aa11.72□□□□□ -0.53
CASC4-201ENST00000299957 EIF1BO60739 113 aaKnown RBP11.72□□□□□ -0.53
CASC4-201ENST00000299957 MS4A18Q3C1V0 323 aa11.72□□□□□ -0.53
CASC4-201ENST00000299957 LPAR5Q9H1C0 372 aa11.72□□□□□ -0.53
CASC4-201ENST00000299957 KPTNQ9Y664 436 aa11.72□□□□□ -0.53
CASC4-201ENST00000299957 TIAF1O95411 115 aa11.72□□□□□ -0.53
CASC4-201ENST00000299957 HPP00738 406 aa11.72□□□□□ -0.53
CASC4-201ENST00000299957 CCL3P10147 92 aa11.72□□□□□ -0.53
CASC4-201ENST00000299957 FPR2P25090 351 aa11.72□□□□□ -0.53
CASC4-201ENST00000299957 ZNF260Q3ZCT1 412 aa11.72□□□□□ -0.53
CASC4-201ENST00000299957 C9orf152Q5JTZ5 239 aa11.72□□□□□ -0.53
CASC4-201ENST00000299957 SYT13Q7L8C5 426 aa11.72□□□□□ -0.53
CASC4-201ENST00000299957 ZNF426Q9BUY5 554 aa11.72□□□□□ -0.53
CASC4-201ENST00000299957 SLC17A5Q9NRA2 495 aa11.72□□□□□ -0.53
CASC4-201ENST00000299957 B4GALT7Q9UBV7 327 aa11.72□□□□□ -0.53
CASC4-201ENST00000299957 NDRG3Q9UGV2 375 aa11.72□□□□□ -0.53
CASC4-201ENST00000299957 CYB5BO43169 146 aa11.71□□□□□ -0.53
CASC4-201ENST00000299957 LY86O95711 162 aa11.71□□□□□ -0.53
CASC4-201ENST00000299957 ZBTB25P24278 435 aa11.71□□□□□ -0.53
CASC4-201ENST00000299957 MMP16P51512 607 aa11.71□□□□□ -0.53
CASC4-201ENST00000299957 TMEM267Q0VDI3 215 aaPredicted RBP11.71□□□□□ -0.53
CASC4-201ENST00000299957 C3AR1Q16581 482 aa11.71□□□□□ -0.53
CASC4-201ENST00000299957 IZUMO4Q1ZYL8 232 aa11.71□□□□□ -0.53
CASC4-201ENST00000299957 SLC25A31Q9H0C2 315 aa11.71□□□□□ -0.53
CASC4-201ENST00000299957 DEFB127Q9H1M4 99 aa11.71□□□□□ -0.53
CASC4-201ENST00000299957 C5orf67F2Z3F1 127 aa11.71□□□□□ -0.53
CASC4-201ENST00000299957 UNC119Q13432 240 aa11.71□□□□□ -0.53
CASC4-201ENST00000299957 ZNF239Q16600 458 aaKnown RBP11.71□□□□□ -0.53
CASC4-201ENST00000299957 HLA-BQ31612 363 aa11.71□□□□□ -0.53
CASC4-201ENST00000299957 IGSF11Q5DX21 431 aa11.71□□□□□ -0.53
CASC4-201ENST00000299957 OSR2Q8N2R0 312 aa11.71□□□□□ -0.53
CASC4-201ENST00000299957 OR5C1Q8NGR4 320 aa11.71□□□□□ -0.53
CASC4-201ENST00000299957 FLVCR1-AS1Q8TAF5 88 aa11.71□□□□□ -0.53
CASC4-201ENST00000299957 EDAQ92838 391 aa11.71□□□□□ -0.53
CASC4-201ENST00000299957 PECRQ9BY49 303 aa11.71□□□□□ -0.53
CASC4-201ENST00000299957 UNKLQ9H9P5 680 aaKnown RBP11.71□□□□□ -0.53
CASC4-201ENST00000299957 CDH20Q9HBT6 801 aa11.71□□□□□ -0.53
CASC4-201ENST00000299957 DUSP13Q9UII6 198 aa11.71□□□□□ -0.53
CASC4-201ENST00000299957 INTS1Q8N201 2190 aaKnown RBP11.71□□□□□ -0.53
CASC4-201ENST00000299957 PRR14LQ5THK1 2151 aa11.71□□□□□ -0.54
CASC4-201ENST00000299957 A0A087WZY1 265 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms