RNA–Protein interactions for RNA: ENST00000299366.11

CDH23-202, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-202ENST00000299366 GDF9O60383 454 aa13.1□□□□□ -0.31
CDH23-202ENST00000299366 CDC14BO60729 498 aa13.1□□□□□ -0.31
CDH23-202ENST00000299366 C1QL1O75973 258 aa13.1□□□□□ -0.31
CDH23-202ENST00000299366 CCL3P10147 92 aa13.1□□□□□ -0.31
CDH23-202ENST00000299366 POLR2GP62487 172 aaKnown RBP eCLIP13.1□□□□□ -0.31
CDH23-202ENST00000299366 RTL6Q6ICC9 239 aa13.1□□□□□ -0.31
CDH23-202ENST00000299366 WDSUB1Q8N9V3 476 aa13.1□□□□□ -0.31
CDH23-202ENST00000299366 OR5M8Q8NGP6 311 aa13.1□□□□□ -0.31
CDH23-202ENST00000299366 SNIP1Q8TAD8 396 aaKnown RBP13.1□□□□□ -0.31
CDH23-202ENST00000299366 P4HTMQ9NXG6 502 aa13.1□□□□□ -0.31
CDH23-202ENST00000299366 PTPRDP23468 1912 aa13.1□□□□□ -0.31
CDH23-202ENST00000299366 AQP7O14520 342 aa13.09□□□□□ -0.31
CDH23-202ENST00000299366 RCC1P18754 421 aaPredicted RBP13.09□□□□□ -0.31
CDH23-202ENST00000299366 H2BFSP57053 126 aa13.09□□□□□ -0.31
CDH23-202ENST00000299366 UBE2G2P60604 165 aa13.09□□□□□ -0.31
CDH23-202ENST00000299366 PLGLAQ15195 96 aa13.09□□□□□ -0.31
CDH23-202ENST00000299366 IGSF11Q5DX21 431 aa13.09□□□□□ -0.31
CDH23-202ENST00000299366 ADPRHL1Q8NDY3 354 aa13.09□□□□□ -0.31
CDH23-202ENST00000299366 UQCC2Q9BRT2 126 aa13.09□□□□□ -0.31
CDH23-202ENST00000299366 KCNK7Q9Y2U2 307 aa13.09□□□□□ -0.31
CDH23-202ENST00000299366 PRELID3BQ9Y3B1 194 aa13.09□□□□□ -0.31
CDH23-202ENST00000299366 LOXL2Q9Y4K0 774 aa13.09□□□□□ -0.31
CDH23-202ENST00000299366 TRAV20A0A0B4J274 112 aa13.09□□□□□ -0.31
CDH23-202ENST00000299366 SNCAP37840 140 aa13.09□□□□□ -0.31
CDH23-202ENST00000299366 FLI1Q01543 452 aaPredicted RBP13.09□□□□□ -0.31
CDH23-202ENST00000299366 PABPC1L2AQ5JQF8 200 aa13.09□□□□□ -0.31
CDH23-202ENST00000299366 GGNBP1Q5YKI7 109 aa13.09□□□□□ -0.31
CDH23-202ENST00000299366 LHX4Q969G2 390 aa13.09□□□□□ -0.31
CDH23-202ENST00000299366 ZNF764Q96H86 408 aaPredicted RBP13.09□□□□□ -0.31
CDH23-202ENST00000299366 ARV1Q9H2C2 271 aa13.09□□□□□ -0.31
CDH23-202ENST00000299366 HDGFL3Q9Y3E1 203 aa13.09□□□□□ -0.31
CDH23-202ENST00000299366 NAT2P11245 290 aa13.09□□□□□ -0.31
CDH23-202ENST00000299366 GAS1P54826 345 aa13.09□□□□□ -0.31
CDH23-202ENST00000299366 RAG2P55895 527 aa13.09□□□□□ -0.31
CDH23-202ENST00000299366 NXPH1P58417 271 aa13.09□□□□□ -0.31
CDH23-202ENST00000299366 TLE4Q04727 773 aa13.09□□□□□ -0.31
CDH23-202ENST00000299366 ZNF239Q16600 458 aaKnown RBP13.09□□□□□ -0.31
CDH23-202ENST00000299366 TMPRSS7Q7RTY8 843 aa13.09□□□□□ -0.31
CDH23-202ENST00000299366 ARRDC1Q8N5I2 433 aa13.09□□□□□ -0.31
CDH23-202ENST00000299366 KISS1RQ969F8 398 aaPredicted RBP13.09□□□□□ -0.31
CDH23-202ENST00000299366 UBL7Q96S82 380 aaPredicted RBP13.09□□□□□ -0.31
CDH23-202ENST00000299366 SOSTQ9BQB4 213 aa13.09□□□□□ -0.31
CDH23-202ENST00000299366 C5orf42Q9H799 3197 aa13.09□□□□□ -0.31
CDH23-202ENST00000299366 GEMIN2O14893 280 aaKnown RBP13.08□□□□□ -0.31
CDH23-202ENST00000299366 CA6P23280 308 aa13.08□□□□□ -0.31
CDH23-202ENST00000299366 C2orf68Q2NKX9 166 aa13.08□□□□□ -0.31
CDH23-202ENST00000299366 SLC16A13Q7RTY0 426 aa13.08□□□□□ -0.31
CDH23-202ENST00000299366 ABHD3Q8WU67 409 aa13.08□□□□□ -0.31
CDH23-202ENST00000299366 SAMD10Q9BYL1 202 aa13.08□□□□□ -0.31
CDH23-202ENST00000299366 AKIRIN1Q9H9L7 192 aaPredicted RBP13.08□□□□□ -0.31
CDH23-202ENST00000299366 ERRFI1Q9UJM3 462 aaPredicted RBP13.08□□□□□ -0.31
CDH23-202ENST00000299366 FANCMQ8IYD8 2048 aa13.08□□□□□ -0.32
CDH23-202ENST00000299366 TANC1Q9C0D5 1861 aa13.08□□□□□ -0.32
CDH23-202ENST00000299366 MNX1P50219 401 aaPredicted RBP13.08□□□□□ -0.32
CDH23-202ENST00000299366 TMEM33P57088 247 aa13.08□□□□□ -0.32
CDH23-202ENST00000299366 FAM185AQ8N0U4 392 aa13.08□□□□□ -0.32
CDH23-202ENST00000299366 OR1F12Q8NHA8 337 aa13.08□□□□□ -0.32
CDH23-202ENST00000299366 VSIG4Q9Y279 399 aa13.08□□□□□ -0.32
CDH23-202ENST00000299366 ZNF98A6NK75 572 aa13.08□□□□□ -0.32
CDH23-202ENST00000299366 ENSAO43768 121 aaKnown RBP13.08□□□□□ -0.32
CDH23-202ENST00000299366 CBR3O75828 277 aa13.08□□□□□ -0.32
CDH23-202ENST00000299366 HBG1P69891 147 aa13.08□□□□□ -0.32
CDH23-202ENST00000299366 HBG2P69892 147 aa13.08□□□□□ -0.32
CDH23-202ENST00000299366 TMEM267Q0VDI3 215 aaPredicted RBP13.08□□□□□ -0.32
CDH23-202ENST00000299366 PIGYQ3MUY2 71 aa13.08□□□□□ -0.32
CDH23-202ENST00000299366 C6orf15Q6UXA7 325 aaPredicted RBP13.08□□□□□ -0.32
CDH23-202ENST00000299366 TM4SF19Q96DZ7 209 aa13.08□□□□□ -0.32
CDH23-202ENST00000299366 MOB1AQ9H8S9 216 aa13.08□□□□□ -0.32
CDH23-202ENST00000299366 KLK13Q9UKR3 277 aa13.08□□□□□ -0.32
CDH23-202ENST00000299366 KCNMB2Q9Y691 235 aa13.08□□□□□ -0.32
CDH23-202ENST00000299366 ZNF727A8MUV8 499 aa13.07□□□□□ -0.32
CDH23-202ENST00000299366 TGFBR3LH3BV60 316 aa13.07□□□□□ -0.32
CDH23-202ENST00000299366 PPP1R2P9O14990 202 aa13.07□□□□□ -0.32
CDH23-202ENST00000299366 MSMO1Q15800 293 aa13.07□□□□□ -0.32
CDH23-202ENST00000299366 C1orf53Q5VUE5 145 aa13.07□□□□□ -0.32
CDH23-202ENST00000299366 SPICQ8N5J4 248 aa13.07□□□□□ -0.32
CDH23-202ENST00000299366 OR10V1Q8NGI7 309 aa13.07□□□□□ -0.32
CDH23-202ENST00000299366 OR10D3Q8NH80 312 aa13.07□□□□□ -0.32
CDH23-202ENST00000299366 SOX7Q9BT81 388 aa13.07□□□□□ -0.32
CDH23-202ENST00000299366 WNT16Q9UBV4 365 aa13.07□□□□□ -0.32
CDH23-202ENST00000299366 NOTCH2Q04721 2471 aa13.07□□□□□ -0.32
CDH23-202ENST00000299366 LOC101059948A0A1B0GTJ6 334 aa13.07□□□□□ -0.32
CDH23-202ENST00000299366 UPK3AO75631 287 aa13.07□□□□□ -0.32
CDH23-202ENST00000299366 SCGB1D1O95968 90 aa13.07□□□□□ -0.32
CDH23-202ENST00000299366 FGF8P55075 233 aaPredicted RBP13.07□□□□□ -0.32
CDH23-202ENST00000299366 MRPL24Q96A35 216 aaKnown RBP13.07□□□□□ -0.32
CDH23-202ENST00000299366 PCOLCE2Q9UKZ9 415 aa13.07□□□□□ -0.32
CDH23-202ENST00000299366 MFSD2BA6NFX1 497 aa13.07□□□□□ -0.32
CDH23-202ENST00000299366 E5RGE8 158 aa13.07□□□□□ -0.32
CDH23-202ENST00000299366 BGLAPP02818 100 aa13.07□□□□□ -0.32
CDH23-202ENST00000299366 KITLGP21583 273 aa13.07□□□□□ -0.32
CDH23-202ENST00000299366 KCNJ3P48549 501 aa13.07□□□□□ -0.32
CDH23-202ENST00000299366 F2RL1P55085 397 aa13.07□□□□□ -0.32
CDH23-202ENST00000299366 NHLRC3Q5JS37 347 aa13.07□□□□□ -0.32
CDH23-202ENST00000299366 RGS7BPQ6MZT1 257 aaPredicted RBP13.07□□□□□ -0.32
CDH23-202ENST00000299366 H1FXQ92522 213 aaKnown RBP13.07□□□□□ -0.32
CDH23-202ENST00000299366 CLEC1BQ9P126 229 aa13.07□□□□□ -0.32
CDH23-202ENST00000299366 NSG2Q9Y328 171 aa13.07□□□□□ -0.32
CDH23-202ENST00000299366 IGHV3-43A0A0B4J1X8 118 aa13.06□□□□□ -0.32
CDH23-202ENST00000299366 A0A1W2PPQ1 181 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms