RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 IGHV2-5P01817 119 aa13.12□□□□□ -0.31
SPIDR-201ENST00000297423 HIST1H2BJP06899 126 aa13.12□□□□□ -0.31
SPIDR-201ENST00000297423 CT45A8P0DMV1 189 aa13.12□□□□□ -0.31
SPIDR-201ENST00000297423 CT45A9P0DMV2 189 aa13.12□□□□□ -0.31
SPIDR-201ENST00000297423 IL11P20809 199 aa13.12□□□□□ -0.31
SPIDR-201ENST00000297423 HIST1H2BOP23527 126 aa13.12□□□□□ -0.31
SPIDR-201ENST00000297423 PAX6P26367 422 aa13.12□□□□□ -0.31
SPIDR-201ENST00000297423 HIST1H2BBP33778 126 aa13.12□□□□□ -0.31
SPIDR-201ENST00000297423 HIST1H2BDP58876 126 aa13.12□□□□□ -0.31
SPIDR-201ENST00000297423 HIST1H2BCP62807 126 aa13.12□□□□□ -0.31
SPIDR-201ENST00000297423 EGR4Q05215 589 aa13.12□□□□□ -0.31
SPIDR-201ENST00000297423 TESK1Q15569 626 aa13.12□□□□□ -0.31
SPIDR-201ENST00000297423 HIST2H2BEQ16778 126 aa13.12□□□□□ -0.31
SPIDR-201ENST00000297423 CT45A2Q5DJT8 189 aa13.12□□□□□ -0.31
SPIDR-201ENST00000297423 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.12□□□□□ -0.31
SPIDR-201ENST00000297423 CST9LP1Q5W188 147 aa13.12□□□□□ -0.31
SPIDR-201ENST00000297423 C16orf47Q6ZP98 133 aaPredicted RBP13.12□□□□□ -0.31
SPIDR-201ENST00000297423 OR10AD1Q8NGE0 317 aa13.12□□□□□ -0.31
SPIDR-201ENST00000297423 HIST1H2BHQ93079 126 aa13.12□□□□□ -0.31
SPIDR-201ENST00000297423 RNF166Q96A37 237 aaPredicted RBP13.12□□□□□ -0.31
SPIDR-201ENST00000297423 LIN37Q96GY3 246 aaPredicted RBP13.12□□□□□ -0.31
SPIDR-201ENST00000297423 HIST1H2BNQ99877 126 aa13.12□□□□□ -0.31
SPIDR-201ENST00000297423 HIST1H2BMQ99879 126 aa13.12□□□□□ -0.31
SPIDR-201ENST00000297423 RNF122Q9H9V4 155 aa13.12□□□□□ -0.31
SPIDR-201ENST00000297423 ATRXP46100 2492 aa13.12□□□□□ -0.31
SPIDR-201ENST00000297423 SHANK1Q9Y566 2161 aa13.12□□□□□ -0.31
SPIDR-201ENST00000297423 RBFOX3A6NFN3 312 aa13.12□□□□□ -0.31
SPIDR-201ENST00000297423 ANGPTL7O43827 346 aa13.12□□□□□ -0.31
SPIDR-201ENST00000297423 OR5AC1P0C628 307 aa13.12□□□□□ -0.31
SPIDR-201ENST00000297423 HIST1H1BP16401 226 aaKnown RBP13.12□□□□□ -0.31
SPIDR-201ENST00000297423 FPR2P25090 351 aa13.12□□□□□ -0.31
SPIDR-201ENST00000297423 NOVA1P51513 510 aaKnown RBP13.12□□□□□ -0.31
SPIDR-201ENST00000297423 FGF8P55075 233 aaPredicted RBP13.12□□□□□ -0.31
SPIDR-201ENST00000297423 BIDP55957 195 aa13.12□□□□□ -0.31
SPIDR-201ENST00000297423 HERV-K104P61576 105 aa13.12□□□□□ -0.31
SPIDR-201ENST00000297423 C10orf91Q5T1B1 145 aa13.12□□□□□ -0.31
SPIDR-201ENST00000297423 SLC43A2Q8N370 569 aa13.12□□□□□ -0.31
SPIDR-201ENST00000297423 SPEM1Q8N4L4 309 aa13.12□□□□□ -0.31
SPIDR-201ENST00000297423 DYRK2Q92630 601 aa13.12□□□□□ -0.31
SPIDR-201ENST00000297423 DAZLQ92904 295 aaKnown RBP13.12□□□□□ -0.31
SPIDR-201ENST00000297423 CBLN4Q9NTU7 201 aa13.12□□□□□ -0.31
SPIDR-201ENST00000297423 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.11□□□□□ -0.31
SPIDR-201ENST00000297423 SSSCA1O60232 199 aa13.11□□□□□ -0.31
SPIDR-201ENST00000297423 GABRA4P48169 554 aa13.11□□□□□ -0.31
SPIDR-201ENST00000297423 PCP4P48539 62 aa13.11□□□□□ -0.31
SPIDR-201ENST00000297423 SLC22A25Q6T423 547 aa13.11□□□□□ -0.31
SPIDR-201ENST00000297423 ATG4DQ86TL0 474 aaPredicted RBP13.11□□□□□ -0.31
SPIDR-201ENST00000297423 C1orf87Q8N0U7 546 aa13.11□□□□□ -0.31
SPIDR-201ENST00000297423 SLC22A18ASQ8N1D0 253 aa13.11□□□□□ -0.31
SPIDR-201ENST00000297423 GPBAR1Q8TDU6 330 aa13.11□□□□□ -0.31
SPIDR-201ENST00000297423 PRODH2Q9UF12 536 aa13.11□□□□□ -0.31
SPIDR-201ENST00000297423 LAMP3Q9UQV4 416 aa13.11□□□□□ -0.31
SPIDR-201ENST00000297423 SIT1Q9Y3P8 196 aa13.11□□□□□ -0.31
SPIDR-201ENST00000297423 TMEM127O75204 238 aa13.11□□□□□ -0.31
SPIDR-201ENST00000297423 APLNRP35414 380 aa13.11□□□□□ -0.31
SPIDR-201ENST00000297423 FAM185AQ8N0U4 392 aa13.11□□□□□ -0.31
SPIDR-201ENST00000297423 DTWD2Q8NBA8 298 aa13.11□□□□□ -0.31
SPIDR-201ENST00000297423 LYRM4Q9HD34 91 aa13.11□□□□□ -0.31
SPIDR-201ENST00000297423 SLC5A6Q9Y289 635 aa13.11□□□□□ -0.31
SPIDR-201ENST00000297423 A8MVM7 634 aa13.11□□□□□ -0.31
SPIDR-201ENST00000297423 GPR137BO60478 399 aa13.11□□□□□ -0.31
SPIDR-201ENST00000297423 RAD51DO75771 328 aa13.11□□□□□ -0.31
SPIDR-201ENST00000297423 CELA2BP08218 269 aaPredicted RBP13.11□□□□□ -0.31
SPIDR-201ENST00000297423 PGCP20142 388 aa13.11□□□□□ -0.31
SPIDR-201ENST00000297423 PTGER4P35408 488 aa13.11□□□□□ -0.31
SPIDR-201ENST00000297423 CLRN1P58418 232 aa13.11□□□□□ -0.31
SPIDR-201ENST00000297423 RNF4P78317 190 aa13.11□□□□□ -0.31
SPIDR-201ENST00000297423 FAHD2BQ6P2I3 314 aaPredicted RBP13.11□□□□□ -0.31
SPIDR-201ENST00000297423 COMMD1Q8N668 190 aa13.11□□□□□ -0.31
SPIDR-201ENST00000297423 RTN4IP1Q8WWV3 396 aaPredicted RBP13.11□□□□□ -0.31
SPIDR-201ENST00000297423 EMG1Q92979 244 aaKnown RBP13.11□□□□□ -0.31
SPIDR-201ENST00000297423 FAHD2AQ96GK7 314 aa13.11□□□□□ -0.31
SPIDR-201ENST00000297423 VSTM2LQ96N03 204 aa13.11□□□□□ -0.31
SPIDR-201ENST00000297423 TRAV36DV7A0A075B6V5 113 aa13.1□□□□□ -0.31
SPIDR-201ENST00000297423 E5RGE8 158 aa13.1□□□□□ -0.31
SPIDR-201ENST00000297423 ST8SIA3O43173 380 aa13.1□□□□□ -0.31
SPIDR-201ENST00000297423 FOXL2P58012 376 aa13.1□□□□□ -0.31
SPIDR-201ENST00000297423 TAS2R46P59540 309 aa13.1□□□□□ -0.31
SPIDR-201ENST00000297423 CMTM1Q8IZ96 169 aa13.1□□□□□ -0.31
SPIDR-201ENST00000297423 TVP23CQ96ET8 276 aa13.1□□□□□ -0.31
SPIDR-201ENST00000297423 PLA2G2EQ9NZK7 142 aa13.1□□□□□ -0.31
SPIDR-201ENST00000297423 PILRAQ9UKJ1 303 aa13.1□□□□□ -0.31
SPIDR-201ENST00000297423 NSG2Q9Y328 171 aa13.1□□□□□ -0.31
SPIDR-201ENST00000297423 HS3ST3B1Q9Y662 390 aa13.1□□□□□ -0.31
SPIDR-201ENST00000297423 CHRM2P08172 466 aa13.1□□□□□ -0.31
SPIDR-201ENST00000297423 ERVS71-1P61550 626 aa13.1□□□□□ -0.31
SPIDR-201ENST00000297423 HNRNPKP61978 463 aaKnown RBP eCLIP13.1□□□□□ -0.31
SPIDR-201ENST00000297423 CEBPEQ15744 281 aa13.1□□□□□ -0.31
SPIDR-201ENST00000297423 PLAC9Q5JTB6 97 aa13.1□□□□□ -0.31
SPIDR-201ENST00000297423 C1orf140Q5VVS0 124 aa13.1□□□□□ -0.31
SPIDR-201ENST00000297423 POC1AQ8NBT0 407 aa13.1□□□□□ -0.31
SPIDR-201ENST00000297423 CCDC187A0A096LP49 1063 aa13.1□□□□□ -0.31
SPIDR-201ENST00000297423 A0A1W2PPQ1 181 aa13.1□□□□□ -0.31
SPIDR-201ENST00000297423 TMEM150CB9EJG8 249 aa13.1□□□□□ -0.31
SPIDR-201ENST00000297423 IGLV3-19P01714 112 aa13.1□□□□□ -0.31
SPIDR-201ENST00000297423 ZNF728P0DKX0 622 aa13.1□□□□□ -0.31
SPIDR-201ENST00000297423 OR5H8P0DN80 308 aa13.1□□□□□ -0.31
SPIDR-201ENST00000297423 STARD6P59095 220 aa13.1□□□□□ -0.31
SPIDR-201ENST00000297423 ALKBH2Q6NS38 261 aa13.1□□□□□ -0.31
SPIDR-201ENST00000297423 NTNG2Q96CW9 530 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms