RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 FGF9P31371 208 aaPredicted RBP9.62□□□□□ -0.87
PKNOX1-201ENST00000291547 HLA-DRB3P79483 266 aa9.62□□□□□ -0.87
PKNOX1-201ENST00000291547 SLC38A11Q08AI6 406 aa9.62□□□□□ -0.87
PKNOX1-201ENST00000291547 IL10RAQ13651 578 aa9.62□□□□□ -0.87
PKNOX1-201ENST00000291547 ZNF628Q5EBL2 1059 aa9.62□□□□□ -0.87
PKNOX1-201ENST00000291547 TGIF2LXQ8IUE1 241 aa9.62□□□□□ -0.87
PKNOX1-201ENST00000291547 ZNF383Q8NA42 475 aa9.62□□□□□ -0.87
PKNOX1-201ENST00000291547 ADPRHL1Q8NDY3 354 aa9.62□□□□□ -0.87
PKNOX1-201ENST00000291547 TRMT61AQ96FX7 289 aaKnown RBP9.62□□□□□ -0.87
PKNOX1-201ENST00000291547 PLPPR2Q96GM1 343 aa9.62□□□□□ -0.87
PKNOX1-201ENST00000291547 TEX101Q9BY14 249 aa9.62□□□□□ -0.87
PKNOX1-201ENST00000291547 DEFB127Q9H1M4 99 aa9.62□□□□□ -0.87
PKNOX1-201ENST00000291547 ZNF275Q9NSD4 429 aaPredicted RBP9.62□□□□□ -0.87
PKNOX1-201ENST00000291547 CASP8AP2Q9UKL3 1982 aa9.62□□□□□ -0.87
PKNOX1-201ENST00000291547 A0A1B0GV90 55 aa9.62□□□□□ -0.87
PKNOX1-201ENST00000291547 DUXBA0A1W2PPF3 345 aa9.62□□□□□ -0.87
PKNOX1-201ENST00000291547 SH2D7A6NKC9 451 aaPredicted RBP9.62□□□□□ -0.87
PKNOX1-201ENST00000291547 M0QZ24 198 aa9.62□□□□□ -0.87
PKNOX1-201ENST00000291547 MPC2O95563 127 aa9.62□□□□□ -0.87
PKNOX1-201ENST00000291547 PSMB2P49721 201 aa9.62□□□□□ -0.87
PKNOX1-201ENST00000291547 STUMQ69YW2 141 aa9.62□□□□□ -0.87
PKNOX1-201ENST00000291547 RLFQ13129 1914 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 M0R1X1 148 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 TNFRSF10CO14798 259 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 LY86O95711 162 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 SLC25A5P05141 298 aaKnown RBP9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 FUT6P51993 359 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 LIMK1P53667 647 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 GNB2P62879 340 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 HIST3H3Q16695 136 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 ELFN2Q5R3F8 820 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 C9orf50Q5SZB4 431 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 SEZ6L2Q6UXD5 910 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 SPNS2Q8IVW8 549 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 OR5M9Q8NGP3 310 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 PP6455Q8WZ26 134 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 TMEM9BQ9NQ34 198 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 MTFP1Q9UDX5 166 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 ZMIZ1Q9ULJ6 1067 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 FOXJ3Q9UPW0 622 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 APC2O95996 2303 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 FAM24AA6NFZ4 105 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 ZNF737O75373 536 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 GABRA1P14867 456 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 CRISP2P16562 243 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 BSGP35613 385 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 ERVS71-1P61550 626 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 INPP5JQ15735 1006 aaPredicted RBP9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 MRM1Q6IN84 353 aaKnown RBP9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 ZADH2Q8N4Q0 377 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 GPR87Q9BY21 358 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 SRD5A3Q9H8P0 318 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 F5H697 171 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 PPM1DO15297 605 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 ZNF253O75346 499 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 ETHE1O95571 254 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 EMDP50402 254 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 GAMTQ14353 236 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 C17orf78Q8N4C9 275 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 FBLIM1Q8WUP2 373 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 ISOC2Q96AB3 205 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 C8orf44Q96CB5 159 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 RAB40CQ96S21 281 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 TMEM191AQ9H0A3 160 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 METTL1Q9UBP6 276 aaKnown RBP9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 WASHC3Q9Y3C0 194 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 NINQ8N4C6 2090 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 IGHV3-15A0A0B4J1V0 119 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 FIGNL2A6NMB9 653 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 A8MXK9 166 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 PLA2G10O15496 165 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 ADAM20O43506 726 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 PLRG1O43660 514 aaKnown RBP9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 OPN1MWP04001 364 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 GP1BAP07359 652 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 PRSS1P07477 247 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 OPN1MW2P0DN77 364 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 OPN1MW3P0DN78 364 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 ZXDAP98168 799 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 SMIM21Q3B7S5 101 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 PYCR3Q53H96 274 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 NHLRC1Q6VVB1 395 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 OR2T10Q8NGZ9 312 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 PATE1Q8WXA2 126 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 SLC25A22Q9H936 323 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 FBXL17Q9UF56 701 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 ICAM5Q9UMF0 924 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 SLC45A2Q9UMX9 530 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 AUP1Q9Y679 476 aa9.61□□□□□ -0.87
PKNOX1-201ENST00000291547 TBX19O60806 448 aa9.6□□□□□ -0.87
PKNOX1-201ENST00000291547 SFT2D2O95562 160 aa9.6□□□□□ -0.87
PKNOX1-201ENST00000291547 IGHA1P01876 353 aa9.6□□□□□ -0.87
PKNOX1-201ENST00000291547 IGHA2P01877 340 aa9.6□□□□□ -0.87
PKNOX1-201ENST00000291547 CSN3P07498 182 aa9.6□□□□□ -0.87
PKNOX1-201ENST00000291547 NMBP08949 121 aa9.6□□□□□ -0.87
PKNOX1-201ENST00000291547 THBS4P35443 961 aa9.6□□□□□ -0.87
PKNOX1-201ENST00000291547 ELOBQ15370 118 aa9.6□□□□□ -0.87
PKNOX1-201ENST00000291547 ZNF79Q15937 498 aa9.6□□□□□ -0.87
PKNOX1-201ENST00000291547 GSG1Q2KHT4 349 aa9.6□□□□□ -0.87
PKNOX1-201ENST00000291547 LRP11Q86VZ4 500 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms