RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 CCDC59Q9P031 241 aaKnown RBP18.36■□□□□ 0.53
PDLIM3-203ENST00000284771 IGHV1-69-2A0A0G2JMI3 117 aa18.35■□□□□ 0.53
PDLIM3-203ENST00000284771 hCG_1807616A0A1W2PRN6 198 aa18.35■□□□□ 0.53
PDLIM3-203ENST00000284771 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.35■□□□□ 0.53
PDLIM3-203ENST00000284771 WNT9BO14905 357 aa18.35■□□□□ 0.53
PDLIM3-203ENST00000284771 LDLRAD4O15165 306 aa18.35■□□□□ 0.53
PDLIM3-203ENST00000284771 NOS1APO75052 506 aaPredicted RBP18.35■□□□□ 0.53
PDLIM3-203ENST00000284771 KDM4BO94953 1096 aa18.35■□□□□ 0.53
PDLIM3-203ENST00000284771 CYB5R3P00387 301 aaPredicted RBP18.35■□□□□ 0.53
PDLIM3-203ENST00000284771 ACAA1P09110 424 aaPredicted RBP18.35■□□□□ 0.53
PDLIM3-203ENST00000284771 EGR1P18146 543 aa18.35■□□□□ 0.53
PDLIM3-203ENST00000284771 UNC119Q13432 240 aa18.35■□□□□ 0.53
PDLIM3-203ENST00000284771 SLC22A6Q4U2R8 563 aa18.35■□□□□ 0.53
PDLIM3-203ENST00000284771 FAM201AQ5SY85 155 aa18.35■□□□□ 0.53
PDLIM3-203ENST00000284771 MKXQ8IYA7 352 aa18.35■□□□□ 0.53
PDLIM3-203ENST00000284771 LRRC29Q8WV35 223 aa18.35■□□□□ 0.53
PDLIM3-203ENST00000284771 NRIP2Q9BQI9 281 aa18.35■□□□□ 0.53
PDLIM3-203ENST00000284771 CXorf56Q9H5V9 222 aa18.35■□□□□ 0.53
PDLIM3-203ENST00000284771 ZNF701Q9NV72 531 aaPredicted RBP18.35■□□□□ 0.53
PDLIM3-203ENST00000284771 IGHV4-39P01824 125 aa18.34■□□□□ 0.53
PDLIM3-203ENST00000284771 GMFBP60983 142 aa18.34■□□□□ 0.53
PDLIM3-203ENST00000284771 Q8NFD4 153 aa18.34■□□□□ 0.53
PDLIM3-203ENST00000284771 ZNF671Q8TAW3 534 aa18.34■□□□□ 0.53
PDLIM3-203ENST00000284771 ELL3Q9HB65 397 aaPredicted RBP18.34■□□□□ 0.53
PDLIM3-203ENST00000284771 POLDIP2Q9Y2S7 368 aa18.34■□□□□ 0.53
PDLIM3-203ENST00000284771 VPS13CQ709C8 3753 aa18.34■□□□□ 0.53
PDLIM3-203ENST00000284771 ANKRD17O75179 2603 aaKnown RBP18.34■□□□□ 0.53
PDLIM3-203ENST00000284771 TMEM272A0A1B0GTI8 110 aa18.34■□□□□ 0.53
PDLIM3-203ENST00000284771 SRRM5B3KS81 715 aa18.34■□□□□ 0.53
PDLIM3-203ENST00000284771 RP2O75695 350 aa18.34■□□□□ 0.53
PDLIM3-203ENST00000284771 EFNA4P52798 201 aa18.34■□□□□ 0.53
PDLIM3-203ENST00000284771 RSU1Q15404 277 aa18.34■□□□□ 0.53
PDLIM3-203ENST00000284771 ZNF181Q2M3W8 571 aa18.34■□□□□ 0.53
PDLIM3-203ENST00000284771 METAP1DQ6UB28 335 aaPredicted RBP18.34■□□□□ 0.53
PDLIM3-203ENST00000284771 POC1AQ8NBT0 407 aa18.34■□□□□ 0.53
PDLIM3-203ENST00000284771 C19orf18Q8NEA5 215 aa18.34■□□□□ 0.53
PDLIM3-203ENST00000284771 LGALS14Q8TCE9 139 aa18.34■□□□□ 0.53
PDLIM3-203ENST00000284771 FAM46BQ96A09 425 aa18.34■□□□□ 0.53
PDLIM3-203ENST00000284771 CEP19Q96LK0 163 aa18.34■□□□□ 0.53
PDLIM3-203ENST00000284771 METTL9Q9H1A3 318 aa18.34■□□□□ 0.53
PDLIM3-203ENST00000284771 HES4Q9HCC6 221 aa18.34■□□□□ 0.53
PDLIM3-203ENST00000284771 TMEM106BQ9NUM4 274 aa18.34■□□□□ 0.53
PDLIM3-203ENST00000284771 RNF7Q9UBF6 113 aa18.34■□□□□ 0.53
PDLIM3-203ENST00000284771 IL36RNQ9UBH0 155 aa18.34■□□□□ 0.53
PDLIM3-203ENST00000284771 TMEM14DPA8MWL7 114 aa18.33■□□□□ 0.52
PDLIM3-203ENST00000284771 ZNF205O95201 554 aa18.33■□□□□ 0.52
PDLIM3-203ENST00000284771 BPNT1O95861 308 aa18.33■□□□□ 0.52
PDLIM3-203ENST00000284771 DAOP14920 347 aa18.33■□□□□ 0.52
PDLIM3-203ENST00000284771 SERPINA2P20848 420 aa18.33■□□□□ 0.52
PDLIM3-203ENST00000284771 SOX6P35712 828 aa18.33■□□□□ 0.52
PDLIM3-203ENST00000284771 EFNB2P52799 333 aa18.33■□□□□ 0.52
PDLIM3-203ENST00000284771 DGUOKQ16854 277 aa18.33■□□□□ 0.52
PDLIM3-203ENST00000284771 BIVMQ86UB2 503 aa18.33■□□□□ 0.52
PDLIM3-203ENST00000284771 OR10Z1Q8NGY1 313 aa18.33■□□□□ 0.52
PDLIM3-203ENST00000284771 S100A13Q99584 98 aa18.33■□□□□ 0.52
PDLIM3-203ENST00000284771 NXF2Q9GZY0 626 aaKnown RBP18.33■□□□□ 0.52
PDLIM3-203ENST00000284771 BANF2Q9H503 90 aa18.33■□□□□ 0.52
PDLIM3-203ENST00000284771 IL36GQ9NZH8 169 aa18.33■□□□□ 0.52
PDLIM3-203ENST00000284771 GHRLQ9UBU3 117 aa18.33■□□□□ 0.52
PDLIM3-203ENST00000284771 NAV2Q8IVL1 2488 aa18.32■□□□□ 0.52
PDLIM3-203ENST00000284771 TRAPPC2LH3BP13 241 aa18.32■□□□□ 0.52
PDLIM3-203ENST00000284771 TMEM178BH3BS89 294 aa18.32■□□□□ 0.52
PDLIM3-203ENST00000284771 HTR3BO95264 441 aa18.32■□□□□ 0.52
PDLIM3-203ENST00000284771 CYB5AP00167 134 aa18.32■□□□□ 0.52
PDLIM3-203ENST00000284771 ELP2Q6IA86 826 aa18.32■□□□□ 0.52
PDLIM3-203ENST00000284771 RDH5Q92781 318 aa18.32■□□□□ 0.52
PDLIM3-203ENST00000284771 ABRACLQ9P1F3 81 aa18.32■□□□□ 0.52
PDLIM3-203ENST00000284771 BAHCC1Q9P281 2608 aa18.32■□□□□ 0.52
PDLIM3-203ENST00000284771 CTDSP2O14595 271 aa18.31■□□□□ 0.52
PDLIM3-203ENST00000284771 TMEM127O75204 238 aa18.31■□□□□ 0.52
PDLIM3-203ENST00000284771 UBBP0CG47 229 aa18.31■□□□□ 0.52
PDLIM3-203ENST00000284771 PAX1P15863 534 aa18.31■□□□□ 0.52
PDLIM3-203ENST00000284771 HFEQ30201 348 aa18.31■□□□□ 0.52
PDLIM3-203ENST00000284771 ZNF404Q494X3 552 aa18.31■□□□□ 0.52
PDLIM3-203ENST00000284771 SFRP4Q6FHJ7 346 aaPredicted RBP18.31■□□□□ 0.52
PDLIM3-203ENST00000284771 KCTD12Q96CX2 325 aaKnown RBP18.31■□□□□ 0.52
PDLIM3-203ENST00000284771 COMMD3Q9UBI1 195 aa18.31■□□□□ 0.52
PDLIM3-203ENST00000284771 SPATA2Q9UM82 520 aa18.31■□□□□ 0.52
PDLIM3-203ENST00000284771 GLRA1P23415 457 aa18.31■□□□□ 0.52
PDLIM3-203ENST00000284771 BMXP51813 675 aa18.31■□□□□ 0.52
PDLIM3-203ENST00000284771 MRPS11P82912 194 aaKnown RBP18.31■□□□□ 0.52
PDLIM3-203ENST00000284771 BOLLQ8N9W6 283 aaKnown RBP18.31■□□□□ 0.52
PDLIM3-203ENST00000284771 OR11L1Q8NGX0 322 aa18.31■□□□□ 0.52
PDLIM3-203ENST00000284771 HMG20AQ9NP66 347 aa18.31■□□□□ 0.52
PDLIM3-203ENST00000284771 FBLN5Q9UBX5 448 aa18.31■□□□□ 0.52
PDLIM3-203ENST00000284771 ASH1LQ9NR48 2969 aaKnown RBP18.3■□□□□ 0.52
PDLIM3-203ENST00000284771 PDZD2O15018 2839 aa18.3■□□□□ 0.52
PDLIM3-203ENST00000284771 ZNF780AO75290 641 aaPredicted RBP18.3■□□□□ 0.52
PDLIM3-203ENST00000284771 CRTAPO75718 401 aaPredicted RBP18.3■□□□□ 0.52
PDLIM3-203ENST00000284771 MGMTP16455 207 aa18.3■□□□□ 0.52
PDLIM3-203ENST00000284771 ACP7Q6ZNF0 438 aa18.3■□□□□ 0.52
PDLIM3-203ENST00000284771 FAM58AQ8N1B3 248 aa18.3■□□□□ 0.52
PDLIM3-203ENST00000284771 KCNG3Q8TAE7 436 aa18.3■□□□□ 0.52
PDLIM3-203ENST00000284771 SLC25A38Q96DW6 304 aa18.3■□□□□ 0.52
PDLIM3-203ENST00000284771 DLL4Q9NR61 685 aa18.3■□□□□ 0.52
PDLIM3-203ENST00000284771 ZNF581Q9P0T4 197 aa18.3■□□□□ 0.52
PDLIM3-203ENST00000284771 A0A075B6Q4 140 aa18.29■□□□□ 0.52
PDLIM3-203ENST00000284771 LRRC30A6NM36 301 aa18.29■□□□□ 0.52
PDLIM3-203ENST00000284771 NXPH2O95156 264 aa18.29■□□□□ 0.52
PDLIM3-203ENST00000284771 MPIG6BO95866 241 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms