RNA–Protein interactions for RNA: ENST00000270142.10

SOD1-201, Transcript of superoxide dismutase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOD1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-201ENST00000270142 LIAT1Q6ZQX7 453 aa12.36□□□□□ -0.43
SOD1-201ENST00000270142 CALHM1Q8IU99 346 aa12.36□□□□□ -0.43
SOD1-201ENST00000270142 SLC35F2Q8IXU6 374 aa12.36□□□□□ -0.43
SOD1-201ENST00000270142 ELMOD2Q8IZ81 293 aa12.36□□□□□ -0.43
SOD1-201ENST00000270142 DYNAPQ8N1N2 210 aa12.36□□□□□ -0.43
SOD1-201ENST00000270142 DNAJC9Q8WXX5 260 aa12.36□□□□□ -0.43
SOD1-201ENST00000270142 NKX3-1Q99801 234 aaPredicted RBP12.36□□□□□ -0.43
SOD1-201ENST00000270142 NPFFR1Q9GZQ6 430 aa12.36□□□□□ -0.43
SOD1-201ENST00000270142 OR52A1Q9UKL2 312 aa12.36□□□□□ -0.43
SOD1-201ENST00000270142 A0A1B0GTI1 187 aa12.35□□□□□ -0.43
SOD1-201ENST00000270142 FAM90A8PA6NJQ4 464 aa12.35□□□□□ -0.43
SOD1-201ENST00000270142 VSIG10L2P0DP72 767 aa12.35□□□□□ -0.43
SOD1-201ENST00000270142 PIPP12273 146 aaPredicted RBP12.35□□□□□ -0.43
SOD1-201ENST00000270142 MPZP25189 248 aa12.35□□□□□ -0.43
SOD1-201ENST00000270142 DLX6P56179 175 aa12.35□□□□□ -0.43
SOD1-201ENST00000270142 LGALS4P56470 323 aa12.35□□□□□ -0.43
SOD1-201ENST00000270142 FAHD1Q6P587 224 aa12.35□□□□□ -0.43
SOD1-201ENST00000270142 MEPCEQ7L2J0 689 aaKnown RBP12.35□□□□□ -0.43
SOD1-201ENST00000270142 ANGPTL5Q86XS5 388 aa12.35□□□□□ -0.43
SOD1-201ENST00000270142 LYG1Q8N1E2 194 aa12.35□□□□□ -0.43
SOD1-201ENST00000270142 ZNF702PQ9H963 129 aa12.35□□□□□ -0.43
SOD1-201ENST00000270142 ADGRL4Q9HBW9 690 aa12.35□□□□□ -0.43
SOD1-201ENST00000270142 MRM2Q9UI43 246 aaKnown RBP12.35□□□□□ -0.43
SOD1-201ENST00000270142 hCG_1809904A0A1W2PP81 198 aa12.34□□□□□ -0.43
SOD1-201ENST00000270142 A0A1W2PPE2 198 aa12.34□□□□□ -0.43
SOD1-201ENST00000270142 A0A1W2PR64 198 aa12.34□□□□□ -0.43
SOD1-201ENST00000270142 A0A1W2PRV1 198 aa12.34□□□□□ -0.43
SOD1-201ENST00000270142 MEX3AA1L020 520 aaKnown RBP12.34□□□□□ -0.43
SOD1-201ENST00000270142 C17orf98A8MV24 154 aa12.34□□□□□ -0.43
SOD1-201ENST00000270142 ERVK11-1P61568 191 aa12.34□□□□□ -0.43
SOD1-201ENST00000270142 COL10A1Q03692 680 aa12.34□□□□□ -0.43
SOD1-201ENST00000270142 HABP2Q14520 560 aaPredicted RBP12.34□□□□□ -0.43
SOD1-201ENST00000270142 LDLRAD2Q5SZI1 272 aa12.34□□□□□ -0.43
SOD1-201ENST00000270142 KPRPQ5T749 579 aaPredicted RBP12.34□□□□□ -0.43
SOD1-201ENST00000270142 AADACL4Q5VUY2 407 aa12.34□□□□□ -0.43
SOD1-201ENST00000270142 CCBE1Q6UXH8 406 aaPredicted RBP12.34□□□□□ -0.43
SOD1-201ENST00000270142 Q6ZSR3 168 aa12.34□□□□□ -0.43
SOD1-201ENST00000270142 TRMT10AQ8TBZ6 339 aaKnown RBP12.34□□□□□ -0.43
SOD1-201ENST00000270142 NRBF2Q96F24 287 aa12.34□□□□□ -0.43
SOD1-201ENST00000270142 PKIBQ9C010 78 aa12.34□□□□□ -0.43
SOD1-201ENST00000270142 SERTAD4Q9NUC0 356 aa12.34□□□□□ -0.43
SOD1-201ENST00000270142 SLC22A13Q9Y226 551 aa12.34□□□□□ -0.43
SOD1-201ENST00000270142 TCF19Q9Y242 345 aa12.34□□□□□ -0.43
SOD1-201ENST00000270142 SNX5Q9Y5X3 404 aa12.34□□□□□ -0.43
SOD1-201ENST00000270142 DNAH3Q8TD57 4116 aa12.34□□□□□ -0.43
SOD1-201ENST00000270142 DHRS7CA6NNS2 312 aa12.33□□□□□ -0.44
SOD1-201ENST00000270142 VGLL3A8MV65 326 aa12.33□□□□□ -0.44
SOD1-201ENST00000270142 ODF3BA8MYP8 253 aa12.33□□□□□ -0.44
SOD1-201ENST00000270142 ZNF670-ZNF695F2Z2N8 137 aa12.33□□□□□ -0.44
SOD1-201ENST00000270142 K7N7A8 449 aa12.33□□□□□ -0.44
SOD1-201ENST00000270142 MITFO75030 526 aaPredicted RBP12.33□□□□□ -0.44
SOD1-201ENST00000270142 PRB2P02812 416 aaPredicted RBP12.33□□□□□ -0.44
SOD1-201ENST00000270142 ARG1P05089 322 aa12.33□□□□□ -0.44
SOD1-201ENST00000270142 RAB13P51153 203 aa12.33□□□□□ -0.44
SOD1-201ENST00000270142 ACTR3P61158 418 aa12.33□□□□□ -0.44
SOD1-201ENST00000270142 EFNB1P98172 346 aa12.33□□□□□ -0.44
SOD1-201ENST00000270142 IL24Q13007 206 aa12.33□□□□□ -0.44
SOD1-201ENST00000270142 FAM189A2Q15884 450 aa12.33□□□□□ -0.44
SOD1-201ENST00000270142 DNAL1Q4LDG9 190 aa12.33□□□□□ -0.44
SOD1-201ENST00000270142 NXNL2Q5VZ03 156 aa12.33□□□□□ -0.44
SOD1-201ENST00000270142 SSX6Q7RTT6 188 aa12.33□□□□□ -0.44
SOD1-201ENST00000270142 TCEANCQ8N8B7 351 aa12.33□□□□□ -0.44
SOD1-201ENST00000270142 ASCC1Q8N9N2 400 aaKnown RBP12.33□□□□□ -0.44
SOD1-201ENST00000270142 UTP4Q969X6 686 aaKnown RBP12.33□□□□□ -0.44
SOD1-201ENST00000270142 MNTQ99583 582 aa12.33□□□□□ -0.44
SOD1-201ENST00000270142 PRRG3Q9BZD7 231 aa12.33□□□□□ -0.44
SOD1-201ENST00000270142 CLN6Q9NWW5 311 aa12.33□□□□□ -0.44
SOD1-201ENST00000270142 POMPQ9Y244 141 aa12.33□□□□□ -0.44
SOD1-201ENST00000270142 TBL2Q9Y4P3 447 aaKnown RBP12.33□□□□□ -0.44
SOD1-201ENST00000270142 FAM230AA0A1W2PPH8 454 aa12.32□□□□□ -0.44
SOD1-201ENST00000270142 A6NDX4 124 aa12.32□□□□□ -0.44
SOD1-201ENST00000270142 F8VVB4 439 aa12.32□□□□□ -0.44
SOD1-201ENST00000270142 F8VWA3 439 aa12.32□□□□□ -0.44
SOD1-201ENST00000270142 H3BSH0 61 aa12.32□□□□□ -0.44
SOD1-201ENST00000270142 GYG2O15488 501 aa12.32□□□□□ -0.44
SOD1-201ENST00000270142 ZNF737O75373 536 aa12.32□□□□□ -0.44
SOD1-201ENST00000270142 FBXO24O75426 580 aa12.32□□□□□ -0.44
SOD1-201ENST00000270142 RPP14O95059 124 aaKnown RBP12.32□□□□□ -0.44
SOD1-201ENST00000270142 CD28P10747 220 aa12.32□□□□□ -0.44
SOD1-201ENST00000270142 CCL1P22362 96 aa12.32□□□□□ -0.44
SOD1-201ENST00000270142 EPHA2P29317 976 aa12.32□□□□□ -0.44
SOD1-201ENST00000270142 EDDM3BP56851 147 aa12.32□□□□□ -0.44
SOD1-201ENST00000270142 ODF4Q2M2E3 257 aa12.32□□□□□ -0.44
SOD1-201ENST00000270142 NSUN5P1Q3KNT7 163 aa12.32□□□□□ -0.44
SOD1-201ENST00000270142 SLX4IPQ5VYV7 408 aa12.32□□□□□ -0.44
SOD1-201ENST00000270142 ZNF626Q68DY1 528 aa12.32□□□□□ -0.44
SOD1-201ENST00000270142 C12orf73Q69YU5 71 aa12.32□□□□□ -0.44
SOD1-201ENST00000270142 TCF23Q7RTU1 214 aa12.32□□□□□ -0.44
SOD1-201ENST00000270142 TMEM219Q86XT9 240 aa12.32□□□□□ -0.44
SOD1-201ENST00000270142 Q8N2B8 174 aa12.32□□□□□ -0.44
SOD1-201ENST00000270142 OR13D1Q8NGV5 346 aa12.32□□□□□ -0.44
SOD1-201ENST00000270142 TMEM163Q8TC26 289 aa12.32□□□□□ -0.44
SOD1-201ENST00000270142 H2AFY2Q9P0M6 372 aaPredicted RBP12.32□□□□□ -0.44
SOD1-201ENST00000270142 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.32□□□□□ -0.44
SOD1-201ENST00000270142 IGKV1-27A0A075B6S5 117 aa12.31□□□□□ -0.44
SOD1-201ENST00000270142 ZAR1LA6NP61 321 aa12.31□□□□□ -0.44
SOD1-201ENST00000270142 CHRM2P08172 466 aa12.31□□□□□ -0.44
SOD1-201ENST00000270142 ZNF728P0DKX0 622 aa12.31□□□□□ -0.44
SOD1-201ENST00000270142 IGHV1-8P0DP01 117 aa12.31□□□□□ -0.44
SOD1-201ENST00000270142 CNN3Q15417 329 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms