RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 RHBDD2Q6NTF9 364 aa14.65□□□□□ -0.06
SQLE-201ENST00000265896 TMEM156Q8N614 296 aa14.65□□□□□ -0.06
SQLE-201ENST00000265896 OXGR1Q96P68 337 aa14.65□□□□□ -0.06
SQLE-201ENST00000265896 RARRES2Q99969 163 aa14.65□□□□□ -0.06
SQLE-201ENST00000265896 PUS1Q9Y606 427 aaKnown RBP eCLIP14.65□□□□□ -0.06
SQLE-201ENST00000265896 DNAJC13O75165 2243 aa14.65□□□□□ -0.06
SQLE-201ENST00000265896 NPIPA2E9PIF3 369 aa14.65□□□□□ -0.06
SQLE-201ENST00000265896 NPIPA3F8WFD2 350 aa14.65□□□□□ -0.06
SQLE-201ENST00000265896 BCAT2O15382 392 aaPredicted RBP14.65□□□□□ -0.06
SQLE-201ENST00000265896 SGCEO43556 437 aa14.65□□□□□ -0.06
SQLE-201ENST00000265896 ZFAND5O76080 213 aa14.65□□□□□ -0.06
SQLE-201ENST00000265896 FBP1P09467 338 aa14.65□□□□□ -0.06
SQLE-201ENST00000265896 CCL2P13500 99 aa14.65□□□□□ -0.06
SQLE-201ENST00000265896 ZNF44P15621 663 aa14.65□□□□□ -0.06
SQLE-201ENST00000265896 TBPP20226 339 aa14.65□□□□□ -0.06
SQLE-201ENST00000265896 NTF4P34130 210 aa14.65□□□□□ -0.06
SQLE-201ENST00000265896 PPP1CCP36873 323 aaKnown RBP14.65□□□□□ -0.06
SQLE-201ENST00000265896 PLA2G5P39877 138 aa14.65□□□□□ -0.06
SQLE-201ENST00000265896 CCL7P80098 99 aa14.65□□□□□ -0.06
SQLE-201ENST00000265896 DCDP81605 110 aaKnown RBP14.65□□□□□ -0.06
SQLE-201ENST00000265896 ENDOGQ14249 297 aaKnown RBP14.65□□□□□ -0.06
SQLE-201ENST00000265896 RPUSD3Q6P087 351 aaKnown RBP14.65□□□□□ -0.06
SQLE-201ENST00000265896 SLC22A25Q6T423 547 aa14.65□□□□□ -0.06
SQLE-201ENST00000265896 TMEM182Q6ZP80 229 aaPredicted RBP14.65□□□□□ -0.06
SQLE-201ENST00000265896 YRDCQ86U90 279 aaKnown RBP14.65□□□□□ -0.06
SQLE-201ENST00000265896 MISPQ8IVT2 679 aa14.65□□□□□ -0.06
SQLE-201ENST00000265896 RTN4IP1Q8WWV3 396 aaPredicted RBP14.65□□□□□ -0.06
SQLE-201ENST00000265896 SMIM8Q96KF7 97 aa14.65□□□□□ -0.06
SQLE-201ENST00000265896 CAMLGP49069 296 aa14.64□□□□□ -0.07
SQLE-201ENST00000265896 HOXA1P49639 335 aaPredicted RBP14.64□□□□□ -0.07
SQLE-201ENST00000265896 ECH1Q13011 328 aa14.64□□□□□ -0.07
SQLE-201ENST00000265896 C5orf46Q6UWT4 87 aa14.64□□□□□ -0.07
SQLE-201ENST00000265896 TMEM217Q8N7C4 229 aa14.64□□□□□ -0.07
SQLE-201ENST00000265896 OR9K2Q8NGE7 335 aa14.64□□□□□ -0.07
SQLE-201ENST00000265896 OR6X1Q8NH79 312 aa14.64□□□□□ -0.07
SQLE-201ENST00000265896 EMG1Q92979 244 aaKnown RBP14.64□□□□□ -0.07
SQLE-201ENST00000265896 C1orf123Q9NWV4 160 aa14.64□□□□□ -0.07
SQLE-201ENST00000265896 CCDC187A0A096LP49 1063 aa14.64□□□□□ -0.07
SQLE-201ENST00000265896 NQO2P16083 231 aa14.64□□□□□ -0.07
SQLE-201ENST00000265896 MSR1P21757 451 aa14.64□□□□□ -0.07
SQLE-201ENST00000265896 TAS2R46P59540 309 aa14.64□□□□□ -0.07
SQLE-201ENST00000265896 NAAAQ02083 359 aa14.64□□□□□ -0.07
SQLE-201ENST00000265896 SLC23A3Q6PIS1 610 aa14.64□□□□□ -0.07
SQLE-201ENST00000265896 FBXL14Q8N1E6 418 aa14.64□□□□□ -0.07
SQLE-201ENST00000265896 FAM213BQ8TBF2 198 aa14.64□□□□□ -0.07
SQLE-201ENST00000265896 UCK1Q9HA47 277 aa14.64□□□□□ -0.07
SQLE-201ENST00000265896 URGCP-MRPS24S4R325 110 aa14.64□□□□□ -0.07
SQLE-201ENST00000265896 FIGNL2A6NMB9 653 aa14.64□□□□□ -0.07
SQLE-201ENST00000265896 LINC00587B1AMM8 73 aa14.64□□□□□ -0.07
SQLE-201ENST00000265896 PHF1O43189 567 aaPredicted RBP14.64□□□□□ -0.07
SQLE-201ENST00000265896 DHRS3O75911 302 aa14.64□□□□□ -0.07
SQLE-201ENST00000265896 IFNA21P01568 189 aa14.64□□□□□ -0.07
SQLE-201ENST00000265896 SPACA9Q96E40 222 aaPredicted RBP14.64□□□□□ -0.07
SQLE-201ENST00000265896 ULBP2Q9BZM5 246 aa14.64□□□□□ -0.07
SQLE-201ENST00000265896 A0A1W2PNV4 684 aa14.63□□□□□ -0.07
SQLE-201ENST00000265896 NCMAPQ5T1S8 102 aa14.63□□□□□ -0.07
SQLE-201ENST00000265896 BTNL8Q6UX41 500 aa14.63□□□□□ -0.07
SQLE-201ENST00000265896 P4HA3Q7Z4N8 544 aa14.63□□□□□ -0.07
SQLE-201ENST00000265896 RGCCQ9H4X1 137 aa14.63□□□□□ -0.07
SQLE-201ENST00000265896 FANCFQ9NPI8 374 aa14.63□□□□□ -0.07
SQLE-201ENST00000265896 ANXA10Q9UJ72 324 aa14.63□□□□□ -0.07
SQLE-201ENST00000265896 IGHV3-64DA0A0J9YX35 117 aa14.63□□□□□ -0.07
SQLE-201ENST00000265896 C7orf77A4D0Y5 90 aa14.63□□□□□ -0.07
SQLE-201ENST00000265896 SCGNO76038 276 aa14.63□□□□□ -0.07
SQLE-201ENST00000265896 H2AFB1P0C5Y9 115 aa14.63□□□□□ -0.07
SQLE-201ENST00000265896 ZNF14P17017 642 aaPredicted RBP14.63□□□□□ -0.07
SQLE-201ENST00000265896 IL15RAQ13261 267 aa14.63□□□□□ -0.07
SQLE-201ENST00000265896 IL34Q6ZMJ4 242 aa14.63□□□□□ -0.07
SQLE-201ENST00000265896 FGFBP3Q8TAT2 258 aa14.63□□□□□ -0.07
SQLE-201ENST00000265896 ZNF576Q9H609 170 aa14.63□□□□□ -0.07
SQLE-201ENST00000265896 CRLF2Q9HC73 371 aa14.63□□□□□ -0.07
SQLE-201ENST00000265896 CACFD1Q9UGQ2 172 aa14.63□□□□□ -0.07
SQLE-201ENST00000265896 A0A0G2JMM0 328 aa14.62□□□□□ -0.07
SQLE-201ENST00000265896 A0A1W2PPB8 328 aa14.62□□□□□ -0.07
SQLE-201ENST00000265896 A0A1W2PRS3 328 aa14.62□□□□□ -0.07
SQLE-201ENST00000265896 KIR3DP1A8MWS1 328 aa14.62□□□□□ -0.07
SQLE-201ENST00000265896 DEDDO75618 318 aa14.62□□□□□ -0.07
SQLE-201ENST00000265896 CCL20P78556 96 aa14.62□□□□□ -0.07
SQLE-201ENST00000265896 FABP9Q0Z7S8 132 aa14.62□□□□□ -0.07
SQLE-201ENST00000265896 PNLIPRP3Q17RR3 467 aa14.62□□□□□ -0.07
SQLE-201ENST00000265896 IGSF11Q5DX21 431 aa14.62□□□□□ -0.07
SQLE-201ENST00000265896 HIST1H2BAQ96A08 127 aa14.62□□□□□ -0.07
SQLE-201ENST00000265896 NIT2Q9NQR4 276 aa14.62□□□□□ -0.07
SQLE-201ENST00000265896 RARRES3Q9UL19 164 aa14.62□□□□□ -0.07
SQLE-201ENST00000265896 MEMO1Q9Y316 297 aa14.62□□□□□ -0.07
SQLE-201ENST00000265896 IGKV1-12A0A0C4DH73 117 aa14.62□□□□□ -0.07
SQLE-201ENST00000265896 ZNF727A8MUV8 499 aa14.62□□□□□ -0.07
SQLE-201ENST00000265896 OR7C1O76099 320 aaPredicted RBP14.62□□□□□ -0.07
SQLE-201ENST00000265896 CST4P01036 141 aa14.62□□□□□ -0.07
SQLE-201ENST00000265896 IGKV1D-12P01611 117 aa14.62□□□□□ -0.07
SQLE-201ENST00000265896 PET100P0DJ07 73 aa14.62□□□□□ -0.07
SQLE-201ENST00000265896 ZNF728P0DKX0 622 aa14.62□□□□□ -0.07
SQLE-201ENST00000265896 SULT1A2P50226 295 aa14.62□□□□□ -0.07
SQLE-201ENST00000265896 GUK1Q16774 197 aa14.62□□□□□ -0.07
SQLE-201ENST00000265896 SPIN3Q5JUX0 258 aa14.62□□□□□ -0.07
SQLE-201ENST00000265896 NSUN5P2Q63ZY6 315 aa14.62□□□□□ -0.07
SQLE-201ENST00000265896 ZFP62Q8NB50 900 aaPredicted RBP14.62□□□□□ -0.07
SQLE-201ENST00000265896 GJC3Q8NFK1 279 aa14.62□□□□□ -0.07
SQLE-201ENST00000265896 PIGCQ92535 297 aa14.62□□□□□ -0.07
SQLE-201ENST00000265896 ZDHHC8Q9ULC8 765 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms