RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 PLEKHA2Q9HB19 425 aa15.15■□□□□ 0.02
SRF-201ENST00000265354 PTRH2Q9Y3E5 179 aaKnown RBP15.15■□□□□ 0.02
SRF-201ENST00000265354 LAMA3Q16787 3333 aa15.15■□□□□ 0.02
SRF-201ENST00000265354 SLC31A2O15432 143 aa15.15■□□□□ 0.02
SRF-201ENST00000265354 SCRG1O75711 98 aa15.15■□□□□ 0.02
SRF-201ENST00000265354 CLDN1O95832 211 aa15.15■□□□□ 0.02
SRF-201ENST00000265354 TBPP20226 339 aa15.15■□□□□ 0.02
SRF-201ENST00000265354 CAPZBP47756 277 aa15.15■□□□□ 0.02
SRF-201ENST00000265354 PNLIPRP2P54317 469 aa15.15■□□□□ 0.02
SRF-201ENST00000265354 SLC35A1P78382 337 aa15.15■□□□□ 0.02
SRF-201ENST00000265354 CNN3Q15417 329 aaKnown RBP15.15■□□□□ 0.02
SRF-201ENST00000265354 SLC25A26Q70HW3 274 aa15.15■□□□□ 0.02
SRF-201ENST00000265354 LURAP1LQ8IV03 231 aa15.15■□□□□ 0.02
SRF-201ENST00000265354 OR8B12Q8NGG6 310 aa15.15■□□□□ 0.02
SRF-201ENST00000265354 OR14J1Q9UGF5 321 aa15.15■□□□□ 0.02
SRF-201ENST00000265354 LHX6Q9UPM6 363 aa15.15■□□□□ 0.02
SRF-201ENST00000265354 ATRXP46100 2492 aa15.14■□□□□ 0.01
SRF-201ENST00000265354 E9PQ18 207 aa15.14■□□□□ 0.01
SRF-201ENST00000265354 WDR1O75083 606 aa15.14■□□□□ 0.01
SRF-201ENST00000265354 ASAH2BP0C7U1 165 aa15.14■□□□□ 0.01
SRF-201ENST00000265354 FGF8P55075 233 aaPredicted RBP15.14■□□□□ 0.01
SRF-201ENST00000265354 EGR4Q05215 589 aa15.14■□□□□ 0.01
SRF-201ENST00000265354 ANKRD55Q3KP44 614 aa15.14■□□□□ 0.01
SRF-201ENST00000265354 FBXO46Q6PJ61 603 aaPredicted RBP15.14■□□□□ 0.01
SRF-201ENST00000265354 VASH2Q86V25 355 aa15.14■□□□□ 0.01
SRF-201ENST00000265354 SNX22Q96L94 193 aa15.14■□□□□ 0.01
SRF-201ENST00000265354 NBASA2RRP1 2371 aa15.14■□□□□ 0.01
SRF-201ENST00000265354 NSG1A0A0A6YYJ2 146 aa15.14■□□□□ 0.01
SRF-201ENST00000265354 FRG2CA6NGY1 282 aa15.14■□□□□ 0.01
SRF-201ENST00000265354 FZD5Q13467 585 aa15.14■□□□□ 0.01
SRF-201ENST00000265354 ZNF345Q14585 488 aa15.14■□□□□ 0.01
SRF-201ENST00000265354 MKXQ8IYA7 352 aa15.14■□□□□ 0.01
SRF-201ENST00000265354 OR5C1Q8NGR4 320 aa15.14■□□□□ 0.01
SRF-201ENST00000265354 MMACHCQ9Y4U1 282 aa15.14■□□□□ 0.01
SRF-201ENST00000265354 PTCRAQ6ISU1 281 aaPredicted RBP15.14■□□□□ 0.01
SRF-201ENST00000265354 ALKBH3Q96Q83 286 aaPredicted RBP15.14■□□□□ 0.01
SRF-201ENST00000265354 LRRC61Q9BV99 259 aa15.14■□□□□ 0.01
SRF-201ENST00000265354 LAMA2P24043 3122 aaKnown RBP15.14■□□□□ 0.01
SRF-201ENST00000265354 SLC25A4P12235 298 aa15.13■□□□□ 0.01
SRF-201ENST00000265354 APOBEC1P41238 236 aaKnown RBP15.13■□□□□ 0.01
SRF-201ENST00000265354 CARD18P57730 90 aa15.13■□□□□ 0.01
SRF-201ENST00000265354 PMP22Q01453 160 aa15.13■□□□□ 0.01
SRF-201ENST00000265354 THEM4Q5T1C6 240 aa15.13■□□□□ 0.01
SRF-201ENST00000265354 HEATR5AQ86XA9 2040 aa15.13■□□□□ 0.01
SRF-201ENST00000265354 NINJ1Q92982 152 aa15.13■□□□□ 0.01
SRF-201ENST00000265354 MCHR2Q969V1 340 aa15.13■□□□□ 0.01
SRF-201ENST00000265354 ZNF426Q9BUY5 554 aa15.13■□□□□ 0.01
SRF-201ENST00000265354 SPTY2D1-AS1A0A0U1RR47 76 aa15.13■□□□□ 0.01
SRF-201ENST00000265354 PPP5D1E7EU14 171 aa15.13■□□□□ 0.01
SRF-201ENST00000265354 FHL5Q5TD97 284 aa15.13■□□□□ 0.01
SRF-201ENST00000265354 YRDCQ86U90 279 aaKnown RBP15.13■□□□□ 0.01
SRF-201ENST00000265354 PPP1R3BQ86XI6 285 aa15.13■□□□□ 0.01
SRF-201ENST00000265354 GNRHR2Q96P88 292 aa15.13■□□□□ 0.01
SRF-201ENST00000265354 KLHDC3Q9BQ90 382 aa15.13■□□□□ 0.01
SRF-201ENST00000265354 LAMP3Q9UQV4 416 aa15.13■□□□□ 0.01
SRF-201ENST00000265354 PLXND1Q9Y4D7 1925 aa15.13■□□□□ 0.01
SRF-201ENST00000265354 SHANK1Q9Y566 2161 aa15.13■□□□□ 0.01
SRF-201ENST00000265354 TTRP02766 147 aa15.13■□□□□ 0.01
SRF-201ENST00000265354 SCAND1P57086 179 aa15.13■□□□□ 0.01
SRF-201ENST00000265354 PKIAP61925 76 aa15.13■□□□□ 0.01
SRF-201ENST00000265354 ZNF260Q3ZCT1 412 aa15.13■□□□□ 0.01
SRF-201ENST00000265354 NKAIN1Q4KMZ8 207 aa15.13■□□□□ 0.01
SRF-201ENST00000265354 RPS4Y2Q8TD47 263 aa15.13■□□□□ 0.01
SRF-201ENST00000265354 PTPMT1Q8WUK0 201 aaPredicted RBP15.13■□□□□ 0.01
SRF-201ENST00000265354 PSMF1Q92530 271 aa15.13■□□□□ 0.01
SRF-201ENST00000265354 PACRGQ96M98 296 aaPredicted RBP15.13■□□□□ 0.01
SRF-201ENST00000265354 VWA8A3KMH1 1905 aa15.13■□□□□ 0.01
SRF-201ENST00000265354 LOC285556D6RIA3 1793 aa15.13■□□□□ 0.01
SRF-201ENST00000265354 TMEM127O75204 238 aa15.13■□□□□ 0.01
SRF-201ENST00000265354 TUSC2O75896 110 aa15.13■□□□□ 0.01
SRF-201ENST00000265354 B4GALT1P15291 398 aa15.13■□□□□ 0.01
SRF-201ENST00000265354 PLGLB1Q02325 96 aa15.13■□□□□ 0.01
SRF-201ENST00000265354 LPAL2Q16609 132 aa15.13■□□□□ 0.01
SRF-201ENST00000265354 AAED1Q7RTV5 226 aa15.13■□□□□ 0.01
SRF-201ENST00000265354 C15orf54Q8N8G6 183 aa15.13■□□□□ 0.01
SRF-201ENST00000265354 ZNF596Q8TC21 504 aa15.13■□□□□ 0.01
SRF-201ENST00000265354 SAT2Q96F10 170 aaPredicted RBP15.13■□□□□ 0.01
SRF-201ENST00000265354 GGACTQ9BVM4 153 aa15.13■□□□□ 0.01
SRF-201ENST00000265354 GABRG2P18507 467 aa15.12■□□□□ 0.01
SRF-201ENST00000265354 EN2P19622 333 aaPredicted RBP15.12■□□□□ 0.01
SRF-201ENST00000265354 TOMM20LQ6UXN7 152 aa15.12■□□□□ 0.01
SRF-201ENST00000265354 OR56B2PQ8NGI1 322 aa15.12■□□□□ 0.01
SRF-201ENST00000265354 CCNL2Q96S94 520 aaPredicted RBP15.12■□□□□ 0.01
SRF-201ENST00000265354 A0A096LPE4 126 aa15.12■□□□□ 0.01
SRF-201ENST00000265354 TRBV5-7A0A0A0MS05 114 aa15.12■□□□□ 0.01
SRF-201ENST00000265354 A0A1W2PPZ6 126 aa15.12■□□□□ 0.01
SRF-201ENST00000265354 K7EQS6 105 aa15.12■□□□□ 0.01
SRF-201ENST00000265354 CST2P09228 141 aa15.12■□□□□ 0.01
SRF-201ENST00000265354 RAB30Q15771 203 aa15.12■□□□□ 0.01
SRF-201ENST00000265354 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.12■□□□□ 0.01
SRF-201ENST00000265354 HSF4Q9ULV5 492 aa15.12■□□□□ 0.01
SRF-201ENST00000265354 A0A1B0GX78 115 aa15.12■□□□□ 0.01
SRF-201ENST00000265354 KLK2P20151 261 aa15.12■□□□□ 0.01
SRF-201ENST00000265354 FABP6P51161 128 aa15.12■□□□□ 0.01
SRF-201ENST00000265354 GAMTQ14353 236 aa15.12■□□□□ 0.01
SRF-201ENST00000265354 BAGE3Q86Y29 109 aa15.12■□□□□ 0.01
SRF-201ENST00000265354 BAGE2Q86Y30 109 aa15.12■□□□□ 0.01
SRF-201ENST00000265354 ARL6IP6Q8N6S5 226 aa15.12■□□□□ 0.01
SRF-201ENST00000265354 OR10G3Q8NGC4 313 aa15.12■□□□□ 0.01
SRF-201ENST00000265354 TM4SF19Q96DZ7 209 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms