RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 EML5Q05BV3 1969 aa5.14□□□□□ -1.59
VCAN-201ENST00000265077 ABHD16AO95870 558 aa5.14□□□□□ -1.59
VCAN-201ENST00000265077 FAM3BP58499 235 aaPredicted RBP5.14□□□□□ -1.59
VCAN-201ENST00000265077 SPATA45Q537H7 98 aa5.14□□□□□ -1.59
VCAN-201ENST00000265077 ZNF385BQ569K4 471 aa5.14□□□□□ -1.59
VCAN-201ENST00000265077 OR8G2PQ6IF36 304 aa5.14□□□□□ -1.59
VCAN-201ENST00000265077 RBMXL3Q8N7X1 1067 aaKnown RBP5.14□□□□□ -1.59
VCAN-201ENST00000265077 MRPL43Q8N983 215 aaKnown RBP5.14□□□□□ -1.59
VCAN-201ENST00000265077 CNTD2Q9H8S5 307 aa5.14□□□□□ -1.59
VCAN-201ENST00000265077 LIN7CQ9NUP9 197 aaKnown RBP5.14□□□□□ -1.59
VCAN-201ENST00000265077 TBX21Q9UL17 535 aa5.14□□□□□ -1.59
VCAN-201ENST00000265077 WIPI2Q9Y4P8 454 aa5.14□□□□□ -1.59
VCAN-201ENST00000265077 H3BQ15 152 aa5.14□□□□□ -1.59
VCAN-201ENST00000265077 ZNF749O43361 778 aa5.14□□□□□ -1.59
VCAN-201ENST00000265077 CTNSO60931 367 aa5.14□□□□□ -1.59
VCAN-201ENST00000265077 CT45A6P0DMU7 189 aa5.14□□□□□ -1.59
VCAN-201ENST00000265077 CT45A5P0DMU8 189 aa5.14□□□□□ -1.59
VCAN-201ENST00000265077 CT45A7P0DMV0 189 aa5.14□□□□□ -1.59
VCAN-201ENST00000265077 RCC1P18754 421 aaPredicted RBP5.14□□□□□ -1.59
VCAN-201ENST00000265077 HRH1P35367 487 aa5.14□□□□□ -1.59
VCAN-201ENST00000265077 CT45A1Q5HYN5 189 aa5.14□□□□□ -1.59
VCAN-201ENST00000265077 BCDIN3DQ7Z5W3 292 aaKnown RBP5.14□□□□□ -1.59
VCAN-201ENST00000265077 ZDHHC22Q8N966 263 aa5.14□□□□□ -1.59
VCAN-201ENST00000265077 SVIPQ8NHG7 77 aa5.14□□□□□ -1.59
VCAN-201ENST00000265077 CT45A3Q8NHU0 189 aa5.14□□□□□ -1.59
VCAN-201ENST00000265077 PIK3IP1Q96FE7 263 aa5.14□□□□□ -1.59
VCAN-201ENST00000265077 DUXBA0A1W2PPF3 345 aa5.14□□□□□ -1.59
VCAN-201ENST00000265077 MRPL33O75394 65 aaKnown RBP5.14□□□□□ -1.59
VCAN-201ENST00000265077 HINT1P49773 126 aaPredicted RBP5.14□□□□□ -1.59
VCAN-201ENST00000265077 TESK1Q15569 626 aa5.14□□□□□ -1.59
VCAN-201ENST00000265077 SDF2Q99470 211 aa5.14□□□□□ -1.59
VCAN-201ENST00000265077 KIR3DX1Q9H7L2 352 aa5.14□□□□□ -1.59
VCAN-201ENST00000265077 KLK11Q9UBX7 282 aa5.14□□□□□ -1.59
VCAN-201ENST00000265077 A6NNC1 897 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 RBM45Q8IUH3 476 aaKnown RBP5.13□□□□□ -1.59
VCAN-201ENST00000265077 OR10P1Q8NGE3 313 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 VN1R17PQ8TDU5 208 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 PINX1Q96BK5 328 aaKnown RBP5.13□□□□□ -1.59
VCAN-201ENST00000265077 Q96M85 177 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 LAT2Q9GZY6 243 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 DNMT3BQ9UBC3 853 aaKnown RBP5.13□□□□□ -1.59
VCAN-201ENST00000265077 SPINT2O43291 252 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 SELEP16581 610 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.13□□□□□ -1.59
VCAN-201ENST00000265077 ZNF813Q6ZN06 617 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 OR52N4Q8NGI2 321 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 TXNIPQ9H3M7 391 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 MBNL1Q9NR56 388 aaKnown RBP5.13□□□□□ -1.59
VCAN-201ENST00000265077 ENSAO43768 121 aaKnown RBP5.13□□□□□ -1.59
VCAN-201ENST00000265077 IGLV3-25P01717 112 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 HLA-DQB1P01920 261 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 CKS1BP61024 79 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 RNF165Q6ZSG1 346 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 MED25Q71SY5 747 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 H2BFWTQ7Z2G1 175 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 ARRDC1Q8N5I2 433 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 OR51A4Q8NGJ6 313 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 FLVCR1Q9Y5Y0 555 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 H3BNC9 293 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 GABRA4P48169 554 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 TNFSF10P50591 281 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 SCAND1P57086 179 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 FBLN7Q53RD9 439 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 SELENOHQ8IZQ5 122 aaKnown RBP5.13□□□□□ -1.59
VCAN-201ENST00000265077 SMIM14Q96QK8 99 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 KLF9Q13886 244 aaPredicted RBP5.13□□□□□ -1.59
VCAN-201ENST00000265077 LINC00346Q8IVM7 164 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 TMEM217Q8N7C4 229 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 SIPA1L1O43166 1804 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 SLC25A4P12235 298 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 TAS1R1Q7RTX1 841 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 VAMP5O95183 116 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 CER1O95813 267 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 CD46P15529 392 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 DHODHQ02127 395 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 IRF3Q14653 427 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 C12orf73Q69YU5 71 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 CD300LDQ6UXZ3 194 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 LINC01465Q8N7H1 131 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 ST8SIA1Q92185 356 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 CHRDL1Q9BU40 450 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 ULBP3Q9BZM4 244 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 NOTCH2Q04721 2471 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 TUSC2O75896 110 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 SOD3P08294 240 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 FABP2P12104 132 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 NTHL1P78549 312 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 DLK2Q6UY11 383 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 LHFPL2Q6ZUX7 228 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 TMEM104Q8NE00 496 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 BLNKQ8WV28 456 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 MIEN1Q9BRT3 115 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 SLC5A6Q9Y289 635 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 ZFP30Q9Y2G7 519 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 HS3ST3A1Q9Y663 406 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 MEX3AA1L020 520 aaKnown RBP5.13□□□□□ -1.59
VCAN-201ENST00000265077 KCNAB3O43448 404 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 ALOX5APP20292 161 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 LIM2P55344 173 aa5.13□□□□□ -1.59
VCAN-201ENST00000265077 TLN2Q9Y4G6 2542 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms