RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 CCDC54Q8NEL0 328 aa15.42■□□□□ 0.06
SDF4-201ENST00000263741 TMEM106AQ96A25 262 aa15.42■□□□□ 0.06
SDF4-201ENST00000263741 SPACA5Q96QH8 159 aa15.42■□□□□ 0.06
SDF4-201ENST00000263741 ABCB9Q9NP78 766 aa15.42■□□□□ 0.06
SDF4-201ENST00000263741 TXNL4BQ9NX01 149 aaKnown RBP15.42■□□□□ 0.06
SDF4-201ENST00000263741 TAS2R4Q9NYW5 299 aa15.42■□□□□ 0.06
SDF4-201ENST00000263741 IGKV1-27A0A075B6S5 117 aa15.42■□□□□ 0.06
SDF4-201ENST00000263741 RHBDL1O75783 438 aa15.42■□□□□ 0.06
SDF4-201ENST00000263741 PLATP00750 562 aa15.42■□□□□ 0.06
SDF4-201ENST00000263741 CD80P33681 288 aa15.42■□□□□ 0.06
SDF4-201ENST00000263741 BDH1Q02338 343 aa15.42■□□□□ 0.06
SDF4-201ENST00000263741 FAM131AQ6UXB0 335 aa15.42■□□□□ 0.06
SDF4-201ENST00000263741 WDR82Q6UXN9 313 aa15.42■□□□□ 0.06
SDF4-201ENST00000263741 GDPD1Q8N9F7 314 aa15.42■□□□□ 0.06
SDF4-201ENST00000263741 ZNF486Q96H40 463 aaPredicted RBP15.42■□□□□ 0.06
SDF4-201ENST00000263741 NKX3-1Q99801 234 aaPredicted RBP15.42■□□□□ 0.06
SDF4-201ENST00000263741 SRRQ9GZT4 340 aa15.42■□□□□ 0.06
SDF4-201ENST00000263741 DOCK11Q5JSL3 2073 aa15.42■□□□□ 0.06
SDF4-201ENST00000263741 OR5B21A6NL26 309 aa15.41■□□□□ 0.06
SDF4-201ENST00000263741 GATBO75879 557 aaKnown RBP15.41■□□□□ 0.06
SDF4-201ENST00000263741 TRAPPC2P0DI81 140 aa15.41■□□□□ 0.06
SDF4-201ENST00000263741 TRAPPC2BP0DI82 140 aa15.41■□□□□ 0.06
SDF4-201ENST00000263741 SLC25A16P16260 332 aa15.41■□□□□ 0.06
SDF4-201ENST00000263741 S100A1P23297 94 aa15.41■□□□□ 0.06
SDF4-201ENST00000263741 IL2RGP31785 369 aa15.41■□□□□ 0.06
SDF4-201ENST00000263741 MZT1Q08AG7 82 aa15.41■□□□□ 0.06
SDF4-201ENST00000263741 ZMYND11Q15326 602 aa15.41■□□□□ 0.06
SDF4-201ENST00000263741 HAGHLQ6PII5 290 aaPredicted RBP15.41■□□□□ 0.06
SDF4-201ENST00000263741 OR5A2Q8NGI9 324 aa15.41■□□□□ 0.06
SDF4-201ENST00000263741 OR51A2Q8NGJ7 313 aa15.41■□□□□ 0.06
SDF4-201ENST00000263741 OR11L1Q8NGX0 322 aa15.41■□□□□ 0.06
SDF4-201ENST00000263741 LRRC29Q8WV35 223 aa15.41■□□□□ 0.06
SDF4-201ENST00000263741 PP6455Q8WZ26 134 aa15.41■□□□□ 0.06
SDF4-201ENST00000263741 TMEM203Q969S6 136 aa15.41■□□□□ 0.06
SDF4-201ENST00000263741 RFT1Q96AA3 541 aa15.41■□□□□ 0.06
SDF4-201ENST00000263741 SEH1LQ96EE3 360 aa15.41■□□□□ 0.06
SDF4-201ENST00000263741 OR51I2Q9H344 312 aa15.41■□□□□ 0.06
SDF4-201ENST00000263741 NEK6Q9HC98 313 aa15.41■□□□□ 0.06
SDF4-201ENST00000263741 MALRD1Q5VYJ5 2156 aa15.41■□□□□ 0.06
SDF4-201ENST00000263741 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.41■□□□□ 0.063e-7■■■□□ 15.2
SDF4-201ENST00000263741 TRBV5-5A0A0J9YX44 114 aa15.4■□□□□ 0.06
SDF4-201ENST00000263741 PQLC2LA1A4F0 135 aa15.4■□□□□ 0.06
SDF4-201ENST00000263741 TMEM210A6NLX4 147 aa15.4■□□□□ 0.06
SDF4-201ENST00000263741 IL7P13232 177 aa15.4■□□□□ 0.06
SDF4-201ENST00000263741 HAAOP46952 286 aa15.4■□□□□ 0.06
SDF4-201ENST00000263741 TMEM33P57088 247 aa15.4■□□□□ 0.06
SDF4-201ENST00000263741 YIF1BQ5BJH7 314 aa15.4■□□□□ 0.06
SDF4-201ENST00000263741 SFRP4Q6FHJ7 346 aaPredicted RBP15.4■□□□□ 0.06
SDF4-201ENST00000263741 NRARPQ7Z6K4 114 aa15.4■□□□□ 0.06
SDF4-201ENST00000263741 ANGPTL5Q86XS5 388 aa15.4■□□□□ 0.06
SDF4-201ENST00000263741 CALHM1Q8IU99 346 aa15.4■□□□□ 0.06
SDF4-201ENST00000263741 Q8TCH9 128 aa15.4■□□□□ 0.06
SDF4-201ENST00000263741 C10orf35Q96D05 121 aa15.4■□□□□ 0.06
SDF4-201ENST00000263741 NPTNQ9Y639 398 aa15.4■□□□□ 0.06
SDF4-201ENST00000263741 SERPINA3P01011 423 aa15.4■□□□□ 0.06
SDF4-201ENST00000263741 IRF2P14316 349 aa15.4■□□□□ 0.06
SDF4-201ENST00000263741 AZGP1P25311 298 aaKnown RBP15.4■□□□□ 0.06
SDF4-201ENST00000263741 GABRA5P31644 462 aa15.4■□□□□ 0.06
SDF4-201ENST00000263741 BTG1P62324 171 aa15.4■□□□□ 0.06
SDF4-201ENST00000263741 RPS25P62851 125 aaKnown RBP15.4■□□□□ 0.06
SDF4-201ENST00000263741 MXD1Q05195 221 aa15.4■□□□□ 0.06
SDF4-201ENST00000263741 ASAH1Q13510 395 aa15.4■□□□□ 0.06
SDF4-201ENST00000263741 GPR50Q13585 617 aa15.4■□□□□ 0.06
SDF4-201ENST00000263741 FAM27D1Q5T7N8 215 aa15.4■□□□□ 0.06
SDF4-201ENST00000263741 C22orf42Q6IC83 251 aa15.4■□□□□ 0.06
SDF4-201ENST00000263741 GCSAMQ8N6F7 178 aa15.4■□□□□ 0.06
SDF4-201ENST00000263741 DEFB108BQ8NET1 73 aa15.4■□□□□ 0.06
SDF4-201ENST00000263741 CAPSLQ8WWF8 208 aa15.4■□□□□ 0.06
SDF4-201ENST00000263741 TIMD4Q96H15 378 aa15.4■□□□□ 0.06
SDF4-201ENST00000263741 ZNF488Q96MN9 340 aa15.4■□□□□ 0.06
SDF4-201ENST00000263741 SMR3AQ99954 134 aa15.4■□□□□ 0.06
SDF4-201ENST00000263741 TLNRD1Q9H1K6 362 aa15.4■□□□□ 0.06
SDF4-201ENST00000263741 RNF7Q9UBF6 113 aa15.4■□□□□ 0.06
SDF4-201ENST00000263741 IGHV3OR15-7A0A075B7D8 119 aa15.39■□□□□ 0.05
SDF4-201ENST00000263741 LRRC30A6NM36 301 aa15.39■□□□□ 0.05
SDF4-201ENST00000263741 AKR7A2O43488 359 aa15.39■□□□□ 0.05
SDF4-201ENST00000263741 SYNGR1O43759 233 aa15.39■□□□□ 0.05
SDF4-201ENST00000263741 IGHV2-70P01814 119 aa15.39■□□□□ 0.05
SDF4-201ENST00000263741 ATF1P18846 271 aa15.39■□□□□ 0.05
SDF4-201ENST00000263741 USF1P22415 310 aaPredicted RBP15.39■□□□□ 0.05
SDF4-201ENST00000263741 SDC2P34741 201 aa15.39■□□□□ 0.05
SDF4-201ENST00000263741 TPBGQ13641 420 aa15.39■□□□□ 0.05
SDF4-201ENST00000263741 CNN3Q15417 329 aaKnown RBP15.39■□□□□ 0.05
SDF4-201ENST00000263741 Q499Y3 187 aa15.39■□□□□ 0.05
SDF4-201ENST00000263741 FAM76BQ5HYJ3 339 aa15.39■□□□□ 0.05
SDF4-201ENST00000263741 UTS2BQ765I0 119 aa15.39■□□□□ 0.05
SDF4-201ENST00000263741 ZCCHC4Q9H5U6 513 aa15.39■□□□□ 0.05
SDF4-201ENST00000263741 SLC7A11Q9UPY5 501 aa15.39■□□□□ 0.05
SDF4-201ENST00000263741 A0A1W2PQ09 198 aa15.39■□□□□ 0.05
SDF4-201ENST00000263741 FABP12A6NFH5 140 aa15.39■□□□□ 0.05
SDF4-201ENST00000263741 CD2P06729 351 aa15.39■□□□□ 0.05
SDF4-201ENST00000263741 PPP3R1P63098 170 aa15.39■□□□□ 0.05
SDF4-201ENST00000263741 ZNF79Q15937 498 aa15.39■□□□□ 0.05
SDF4-201ENST00000263741 SERPINA12Q8IW75 414 aa15.39■□□□□ 0.05
SDF4-201ENST00000263741 OR5D18Q8NGL1 313 aa15.39■□□□□ 0.05
SDF4-201ENST00000263741 CLDND2Q8NHS1 167 aa15.39■□□□□ 0.05
SDF4-201ENST00000263741 RAB1CQ92928 201 aa15.39■□□□□ 0.05
SDF4-201ENST00000263741 ERGIC1Q969X5 290 aa15.39■□□□□ 0.05
SDF4-201ENST00000263741 DIRAS2Q96HU8 199 aa15.39■□□□□ 0.05
SDF4-201ENST00000263741 WDR13Q9H1Z4 485 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms