RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 NDUFB6O95139 128 aa19.15■□□□□ 0.66
SIX3-201ENST00000260653 CD74P04233 296 aa19.15■□□□□ 0.66
SIX3-201ENST00000260653 IGFBP7Q16270 282 aa19.15■□□□□ 0.66
SIX3-201ENST00000260653 TIMM23BQ5SRD1 257 aa19.15■□□□□ 0.66
SIX3-201ENST00000260653 ZCCHC14Q8WYQ9 949 aaKnown RBP19.15■□□□□ 0.66
SIX3-201ENST00000260653 ST8SIA4Q92187 359 aa19.15■□□□□ 0.66
SIX3-201ENST00000260653 RADILQ96JH8 1075 aa19.15■□□□□ 0.66
SIX3-201ENST00000260653 IGHV2OR16-5A0A0B4J2B6 119 aa19.14■□□□□ 0.65
SIX3-201ENST00000260653 CALCRP30988 508 aa19.14■□□□□ 0.65
SIX3-201ENST00000260653 MPV17P39210 176 aa19.14■□□□□ 0.65
SIX3-201ENST00000260653 FAM27E3Q08E93 113 aa19.14■□□□□ 0.65
SIX3-201ENST00000260653 PNLIPRP3Q17RR3 467 aa19.14■□□□□ 0.65
SIX3-201ENST00000260653 NKAPLQ5M9Q1 402 aa19.14■□□□□ 0.65
SIX3-201ENST00000260653 OSR2Q8N2R0 312 aa19.14■□□□□ 0.65
SIX3-201ENST00000260653 SLAMF9Q96A28 289 aa19.14■□□□□ 0.65
SIX3-201ENST00000260653 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP19.14■□□□□ 0.65
SIX3-201ENST00000260653 GEMIN2O14893 280 aaKnown RBP19.14■□□□□ 0.65
SIX3-201ENST00000260653 TRAPPC2P0DI81 140 aa19.14■□□□□ 0.65
SIX3-201ENST00000260653 TRAPPC2BP0DI82 140 aa19.14■□□□□ 0.65
SIX3-201ENST00000260653 RAC2P15153 192 aa19.14■□□□□ 0.65
SIX3-201ENST00000260653 RAG2P55895 527 aa19.14■□□□□ 0.65
SIX3-201ENST00000260653 PSG7Q13046 419 aa19.14■□□□□ 0.65
SIX3-201ENST00000260653 ARFRP1Q13795 201 aa19.14■□□□□ 0.65
SIX3-201ENST00000260653 ZSCAN4Q8NAM6 433 aaPredicted RBP19.14■□□□□ 0.65
SIX3-201ENST00000260653 KLF14Q8TD94 323 aaPredicted RBP19.14■□□□□ 0.65
SIX3-201ENST00000260653 ACTR6Q9GZN1 396 aa19.14■□□□□ 0.65
SIX3-201ENST00000260653 C7orf66A4D0T2 115 aa19.13■□□□□ 0.65
SIX3-201ENST00000260653 CSN2P05814 226 aa19.13■□□□□ 0.65
SIX3-201ENST00000260653 LURAP1LQ8IV03 231 aa19.13■□□□□ 0.65
SIX3-201ENST00000260653 BEST4Q8NFU0 473 aa19.13■□□□□ 0.65
SIX3-201ENST00000260653 SNAPC3Q92966 411 aa19.13■□□□□ 0.65
SIX3-201ENST00000260653 MARS2Q96GW9 593 aaKnown RBP19.13■□□□□ 0.65
SIX3-201ENST00000260653 GHITMQ9H3K2 345 aa19.13■□□□□ 0.65
SIX3-201ENST00000260653 POU2F3Q9UKI9 436 aa19.13■□□□□ 0.65
SIX3-201ENST00000260653 ST3GAL6Q9Y274 331 aa19.13■□□□□ 0.65
SIX3-201ENST00000260653 AMY2AP04746 511 aa19.13■□□□□ 0.65
SIX3-201ENST00000260653 ZNF83P51522 516 aa19.13■□□□□ 0.65
SIX3-201ENST00000260653 RBMS2Q15434 407 aaKnown RBP19.13■□□□□ 0.65
SIX3-201ENST00000260653 FAM169BQ8N8A8 192 aa19.13■□□□□ 0.65
SIX3-201ENST00000260653 ST6GAL2Q96JF0 529 aa19.13■□□□□ 0.65
SIX3-201ENST00000260653 GINS4Q9BRT9 223 aa19.13■□□□□ 0.65
SIX3-201ENST00000260653 PLEKHJ1Q9NW61 149 aa19.13■□□□□ 0.65
SIX3-201ENST00000260653 BCL3P20749 454 aa19.12■□□□□ 0.65
SIX3-201ENST00000260653 FBXW5Q969U6 566 aa19.12■□□□□ 0.65
SIX3-201ENST00000260653 POLEQ07864 2286 aa19.12■□□□□ 0.65
SIX3-201ENST00000260653 SERPINE3A8MV23 424 aa19.12■□□□□ 0.65
SIX3-201ENST00000260653 ZNF735P0CB33 412 aa19.12■□□□□ 0.65
SIX3-201ENST00000260653 RAD52P43351 418 aa19.12■□□□□ 0.65
SIX3-201ENST00000260653 EIF2B2P49770 351 aaKnown RBP19.12■□□□□ 0.65
SIX3-201ENST00000260653 RRAS2P62070 204 aaPredicted RBP19.12■□□□□ 0.65
SIX3-201ENST00000260653 RBPJQ06330 500 aa19.12■□□□□ 0.65
SIX3-201ENST00000260653 NKPD1Q17RQ9 610 aa19.12■□□□□ 0.65
SIX3-201ENST00000260653 HAGHLQ6PII5 290 aaPredicted RBP19.12■□□□□ 0.65
SIX3-201ENST00000260653 LIX1LQ8IVB5 337 aa19.12■□□□□ 0.65
SIX3-201ENST00000260653 MRPS24Q96EL2 167 aaKnown RBP19.12■□□□□ 0.65
SIX3-201ENST00000260653 TPRP12270 2363 aaKnown RBP19.12■□□□□ 0.65
SIX3-201ENST00000260653 OR5B21A6NL26 309 aa19.11■□□□□ 0.65
SIX3-201ENST00000260653 F8VVB4 439 aa19.11■□□□□ 0.65
SIX3-201ENST00000260653 F8VWA3 439 aa19.11■□□□□ 0.65
SIX3-201ENST00000260653 SYNGR1O43759 233 aa19.11■□□□□ 0.65
SIX3-201ENST00000260653 HRH1P35367 487 aa19.11■□□□□ 0.65
SIX3-201ENST00000260653 RBM11P57052 281 aaKnown RBP19.11■□□□□ 0.65
SIX3-201ENST00000260653 GNG3P63215 75 aa19.11■□□□□ 0.65
SIX3-201ENST00000260653 KLRB1Q12918 225 aa19.11■□□□□ 0.65
SIX3-201ENST00000260653 SLC6A7Q99884 636 aa19.11■□□□□ 0.65
SIX3-201ENST00000260653 PIGMQ9H3S5 423 aa19.11■□□□□ 0.65
SIX3-201ENST00000260653 MTCH1Q9NZJ7 389 aa19.11■□□□□ 0.65
SIX3-201ENST00000260653 ANAPC10Q9UM13 185 aa19.11■□□□□ 0.65
SIX3-201ENST00000260653 IQCF6A8MYZ5 107 aa19.11■□□□□ 0.65
SIX3-201ENST00000260653 PYCARD-AS1I3L0S3 204 aa19.11■□□□□ 0.65
SIX3-201ENST00000260653 DAZAP2Q15038 168 aaPredicted RBP19.11■□□□□ 0.65
SIX3-201ENST00000260653 PDCD1Q15116 288 aa19.11■□□□□ 0.65
SIX3-201ENST00000260653 RNASE10Q5GAN6 216 aaKnown RBP19.11■□□□□ 0.65
SIX3-201ENST00000260653 ATAD3CQ5T2N8 411 aa19.11■□□□□ 0.65
SIX3-201ENST00000260653 MRGPRGQ86SM5 289 aa19.11■□□□□ 0.65
SIX3-201ENST00000260653 BPIFB2Q8N4F0 458 aa19.11■□□□□ 0.65
SIX3-201ENST00000260653 DACT3Q96B18 629 aaPredicted RBP19.11■□□□□ 0.65
SIX3-201ENST00000260653 FZR1Q9UM11 496 aa19.11■□□□□ 0.65
SIX3-201ENST00000260653 ITPR1Q14643 2758 aa19.1■□□□□ 0.65
SIX3-201ENST00000260653 NBASA2RRP1 2371 aa19.1■□□□□ 0.65
SIX3-201ENST00000260653 M0R1B8 84 aa19.1■□□□□ 0.65
SIX3-201ENST00000260653 ANXA7P20073 488 aaKnown RBP19.1■□□□□ 0.65
SIX3-201ENST00000260653 CCKARP32238 428 aa19.1■□□□□ 0.65
SIX3-201ENST00000260653 NAAAQ02083 359 aa19.1■□□□□ 0.65
SIX3-201ENST00000260653 PPA1Q15181 289 aa19.1■□□□□ 0.65
SIX3-201ENST00000260653 IDO2Q6ZQW0 420 aa19.1■□□□□ 0.65
SIX3-201ENST00000260653 C22orf34Q6ZV56 151 aa19.1■□□□□ 0.65
SIX3-201ENST00000260653 RELL2Q8NC24 303 aaPredicted RBP19.1■□□□□ 0.65
SIX3-201ENST00000260653 OR10AD1Q8NGE0 317 aa19.1■□□□□ 0.65
SIX3-201ENST00000260653 MUCL1Q96DR8 90 aa19.1■□□□□ 0.65
SIX3-201ENST00000260653 HS3ST6Q96QI5 342 aa19.1■□□□□ 0.65
SIX3-201ENST00000260653 OCSTAMPQ9BR26 566 aa19.1■□□□□ 0.65
SIX3-201ENST00000260653 BCL2L14Q9BZR8 327 aa19.1■□□□□ 0.65
SIX3-201ENST00000260653 NPDC1Q9NQX5 325 aaPredicted RBP19.1■□□□□ 0.65
SIX3-201ENST00000260653 ZNF230Q9UIE0 474 aaPredicted RBP19.1■□□□□ 0.65
SIX3-201ENST00000260653 BTF3P20290 206 aaKnown RBP19.1■□□□□ 0.65
SIX3-201ENST00000260653 CHATP28329 748 aa19.1■□□□□ 0.65
SIX3-201ENST00000260653 CD83Q01151 205 aa19.1■□□□□ 0.65
SIX3-201ENST00000260653 ST3GAL2Q16842 350 aa19.1■□□□□ 0.65
SIX3-201ENST00000260653 UNQ6126/PRO20091Q6UXV3 157 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms