RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 TCRBP04435 133 aa14.19□□□□□ -0.14
SDCBP-201ENST00000260130 TNFRSF1AP19438 455 aa14.19□□□□□ -0.14
SDCBP-201ENST00000260130 ZNF684Q5T5D7 378 aa14.19□□□□□ -0.14
SDCBP-201ENST00000260130 DTX3Q8N9I9 347 aa14.19□□□□□ -0.14
SDCBP-201ENST00000260130 OR56B2PQ8NGI1 322 aa14.19□□□□□ -0.14
SDCBP-201ENST00000260130 GHSRQ92847 366 aa14.19□□□□□ -0.14
SDCBP-201ENST00000260130 PBOV1Q9GZY1 135 aa14.19□□□□□ -0.14
SDCBP-201ENST00000260130 GHITMQ9H3K2 345 aa14.19□□□□□ -0.14
SDCBP-201ENST00000260130 MRPL15Q9P015 296 aaKnown RBP14.19□□□□□ -0.14
SDCBP-201ENST00000260130 ZNF391Q9UJN7 358 aa14.19□□□□□ -0.14
SDCBP-201ENST00000260130 TRAV6A0A075B6T7 132 aa14.18□□□□□ -0.14
SDCBP-201ENST00000260130 hCG_38984A0A1B0GV85 526 aa14.18□□□□□ -0.14
SDCBP-201ENST00000260130 ANXA3P12429 323 aa14.18□□□□□ -0.14
SDCBP-201ENST00000260130 CA6P23280 308 aa14.18□□□□□ -0.14
SDCBP-201ENST00000260130 ACTA2P62736 377 aa14.18□□□□□ -0.14
SDCBP-201ENST00000260130 ACTG2P63267 376 aa14.18□□□□□ -0.14
SDCBP-201ENST00000260130 ITLN1Q8WWA0 313 aa14.18□□□□□ -0.14
SDCBP-201ENST00000260130 CCL17Q92583 94 aa14.18□□□□□ -0.14
SDCBP-201ENST00000260130 OR2V2Q96R30 315 aa14.18□□□□□ -0.14
SDCBP-201ENST00000260130 RABL2AQ9UBK7 228 aaPredicted RBP14.18□□□□□ -0.14
SDCBP-201ENST00000260130 RABL2BQ9UNT1 228 aa14.18□□□□□ -0.14
SDCBP-201ENST00000260130 R4GMQ9 66 aa14.18□□□□□ -0.14
SDCBP-201ENST00000260130 A6NIN4 97 aa14.17□□□□□ -0.14
SDCBP-201ENST00000260130 OGG1O15527 345 aa14.17□□□□□ -0.14
SDCBP-201ENST00000260130 NOS1APO75052 506 aaPredicted RBP14.17□□□□□ -0.14
SDCBP-201ENST00000260130 SRSF10O75494 262 aaKnown RBP14.17□□□□□ -0.14
SDCBP-201ENST00000260130 PNPP00491 289 aa14.17□□□□□ -0.14
SDCBP-201ENST00000260130 GPR6P46095 362 aaPredicted RBP14.17□□□□□ -0.14
SDCBP-201ENST00000260130 OR3A3P47888 321 aa14.17□□□□□ -0.14
SDCBP-201ENST00000260130 GSK3AP49840 483 aa14.17□□□□□ -0.14
SDCBP-201ENST00000260130 GBX2P52951 348 aaPredicted RBP14.17□□□□□ -0.14
SDCBP-201ENST00000260130 RAG2P55895 527 aa14.17□□□□□ -0.14
SDCBP-201ENST00000260130 P2RX3P56373 397 aa14.17□□□□□ -0.14
SDCBP-201ENST00000260130 ARPC4P59998 168 aa14.17□□□□□ -0.14
SDCBP-201ENST00000260130 ZNF431Q8TF32 576 aaPredicted RBP14.17□□□□□ -0.14
SDCBP-201ENST00000260130 CITED4Q96RK1 184 aa14.17□□□□□ -0.14
SDCBP-201ENST00000260130 OR51J1Q9H342 316 aa14.17□□□□□ -0.14
SDCBP-201ENST00000260130 GSX1Q9H4S2 264 aaPredicted RBP14.17□□□□□ -0.14
SDCBP-201ENST00000260130 TREM2Q9NZC2 230 aa14.17□□□□□ -0.14
SDCBP-201ENST00000260130 ZNF222Q9UK12 451 aa14.17□□□□□ -0.14
SDCBP-201ENST00000260130 NOP16Q9Y3C1 178 aaKnown RBP14.17□□□□□ -0.14
SDCBP-201ENST00000260130 ZANQ9Y493 2812 aa14.17□□□□□ -0.14
SDCBP-201ENST00000260130 A0A0U1RQV5 110 aa14.17□□□□□ -0.14
SDCBP-201ENST00000260130 F5H5P2 479 aa14.17□□□□□ -0.14
SDCBP-201ENST00000260130 PPIHO43447 177 aaKnown RBP14.17□□□□□ -0.14
SDCBP-201ENST00000260130 GATBO75879 557 aaKnown RBP14.17□□□□□ -0.14
SDCBP-201ENST00000260130 SRP9P49458 86 aaKnown RBP14.17□□□□□ -0.14
SDCBP-201ENST00000260130 MFGE8Q08431 387 aaPredicted RBP14.17□□□□□ -0.14
SDCBP-201ENST00000260130 LIPNQ5VXI9 398 aa14.17□□□□□ -0.14
SDCBP-201ENST00000260130 SYS1Q8N2H4 156 aa14.17□□□□□ -0.14
SDCBP-201ENST00000260130 PPP1R14AQ96A00 147 aa14.17□□□□□ -0.14
SDCBP-201ENST00000260130 MEGF10Q96KG7 1140 aa14.17□□□□□ -0.14
SDCBP-201ENST00000260130 LYZL4Q96KX0 146 aa14.17□□□□□ -0.14
SDCBP-201ENST00000260130 ZCCHC4Q9H5U6 513 aa14.17□□□□□ -0.14
SDCBP-201ENST00000260130 IGHV4-61A0A0C4DH41 118 aa14.16□□□□□ -0.14
SDCBP-201ENST00000260130 ANKRD30BLA7E2S9 258 aa14.16□□□□□ -0.14
SDCBP-201ENST00000260130 GMDSO60547 372 aa14.16□□□□□ -0.14
SDCBP-201ENST00000260130 RPP14O95059 124 aaKnown RBP14.16□□□□□ -0.14
SDCBP-201ENST00000260130 TACSTD2P09758 323 aa14.16□□□□□ -0.14
SDCBP-201ENST00000260130 OR8G1Q15617 311 aa14.16□□□□□ -0.14
SDCBP-201ENST00000260130 OR8B8Q15620 311 aa14.16□□□□□ -0.14
SDCBP-201ENST00000260130 OR5H6Q8NGV6 325 aa14.16□□□□□ -0.14
SDCBP-201ENST00000260130 SMIM19Q96E16 107 aa14.16□□□□□ -0.14
SDCBP-201ENST00000260130 MRPL48Q96GC5 212 aaKnown RBP14.16□□□□□ -0.14
SDCBP-201ENST00000260130 CMTM3Q96MX0 182 aa14.16□□□□□ -0.14
SDCBP-201ENST00000260130 MOB1AQ9H8S9 216 aa14.16□□□□□ -0.14
SDCBP-201ENST00000260130 G6PC2Q9NQR9 355 aa14.16□□□□□ -0.14
SDCBP-201ENST00000260130 SLC23A1Q9UHI7 598 aa14.16□□□□□ -0.14
SDCBP-201ENST00000260130 GTF2A1LQ9UNN4 478 aa14.16□□□□□ -0.14
SDCBP-201ENST00000260130 CHD3Q12873 2000 aaKnown RBP14.16□□□□□ -0.14
SDCBP-201ENST00000260130 ANKRD61A6NGH8 418 aa14.16□□□□□ -0.14
SDCBP-201ENST00000260130 CTDSPLO15194 276 aa14.16□□□□□ -0.14
SDCBP-201ENST00000260130 CD1AP06126 327 aa14.16□□□□□ -0.14
SDCBP-201ENST00000260130 CDK5R1Q15078 307 aa14.16□□□□□ -0.14
SDCBP-201ENST00000260130 ZBTB37Q5TC79 503 aa14.16□□□□□ -0.14
SDCBP-201ENST00000260130 CLEC9AQ6UXN8 241 aa14.16□□□□□ -0.14
SDCBP-201ENST00000260130 KCTD20Q7Z5Y7 419 aa14.16□□□□□ -0.14
SDCBP-201ENST00000260130 CSNK2A3Q8NEV1 391 aa14.16□□□□□ -0.14
SDCBP-201ENST00000260130 OR11H7Q8NGC8 314 aa14.16□□□□□ -0.14
SDCBP-201ENST00000260130 HAVCR2Q8TDQ0 301 aa14.16□□□□□ -0.14
SDCBP-201ENST00000260130 ADAT1Q9BUB4 502 aaKnown RBP14.16□□□□□ -0.14
SDCBP-201ENST00000260130 GCM1Q9NP62 436 aa14.16□□□□□ -0.14
SDCBP-201ENST00000260130 OR52A1Q9UKL2 312 aa14.16□□□□□ -0.14
SDCBP-201ENST00000260130 MGAT4AQ9UM21 535 aa14.16□□□□□ -0.14
SDCBP-201ENST00000260130 PPP1R3CQ9UQK1 317 aa14.16□□□□□ -0.14
SDCBP-201ENST00000260130 GSTZ1O43708 216 aaPredicted RBP14.15□□□□□ -0.14
SDCBP-201ENST00000260130 LY6G6DO95868 133 aa14.15□□□□□ -0.14
SDCBP-201ENST00000260130 CD3GP09693 182 aa14.15□□□□□ -0.14
SDCBP-201ENST00000260130 ATF1P18846 271 aa14.15□□□□□ -0.14
SDCBP-201ENST00000260130 DYRK1AQ13627 763 aa14.15□□□□□ -0.14
SDCBP-201ENST00000260130 CDONQ4KMG0 1287 aa14.15□□□□□ -0.14
SDCBP-201ENST00000260130 TP53I3Q53FA7 332 aa14.15□□□□□ -0.14
SDCBP-201ENST00000260130 FTMTQ8N4E7 242 aa14.15□□□□□ -0.14
SDCBP-201ENST00000260130 OR8H1Q8NGG4 311 aa14.15□□□□□ -0.14
SDCBP-201ENST00000260130 OR51E1Q8TCB6 317 aa14.15□□□□□ -0.14
SDCBP-201ENST00000260130 MED30Q96HR3 178 aa14.15□□□□□ -0.14
SDCBP-201ENST00000260130 SOX7Q9BT81 388 aa14.15□□□□□ -0.14
SDCBP-201ENST00000260130 GNG8Q9UK08 70 aa14.15□□□□□ -0.14
SDCBP-201ENST00000260130 SPATA2Q9UM82 520 aa14.15□□□□□ -0.14
SDCBP-201ENST00000260130 A0A1B0GVI7 797 aa14.15□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms