RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 DEPPQ9NTK1 212 aa19.09■□□□□ 0.65
SMARCD2-201ENST00000225742 ASF1BQ9NVP2 202 aa19.09■□□□□ 0.65
SMARCD2-201ENST00000225742 P4HTMQ9NXG6 502 aa19.09■□□□□ 0.65
SMARCD2-201ENST00000225742 PRR13Q9NZ81 148 aa19.09■□□□□ 0.65
SMARCD2-201ENST00000225742 MYO7BQ6PIF6 2116 aa19.09■□□□□ 0.65
SMARCD2-201ENST00000225742 NCKAP5O14513 1909 aa19.08■□□□□ 0.65
SMARCD2-201ENST00000225742 A0A0C4DFX4 3053 aa19.08■□□□□ 0.65
SMARCD2-201ENST00000225742 IGKV3D-15A0A087WSY6 115 aa19.08■□□□□ 0.64
SMARCD2-201ENST00000225742 ZNF816-ZNF321PA0A0X1KG74 233 aa19.08■□□□□ 0.64
SMARCD2-201ENST00000225742 FCGR3AP08637 254 aa19.08■□□□□ 0.64
SMARCD2-201ENST00000225742 HOXB5P09067 269 aa19.08■□□□□ 0.64
SMARCD2-201ENST00000225742 CLDN15P56746 228 aa19.08■□□□□ 0.64
SMARCD2-201ENST00000225742 ZNF585AQ6P3V2 769 aa19.08■□□□□ 0.64
SMARCD2-201ENST00000225742 SKA3Q8IX90 412 aa19.08■□□□□ 0.64
SMARCD2-201ENST00000225742 FNDC9Q8TBE3 224 aa19.08■□□□□ 0.64
SMARCD2-201ENST00000225742 CNTNAP3BQ96NU0 1288 aa19.08■□□□□ 0.64
SMARCD2-201ENST00000225742 CNTNAP3Q9BZ76 1288 aa19.08■□□□□ 0.64
SMARCD2-201ENST00000225742 SLC5A7Q9GZV3 580 aa19.08■□□□□ 0.64
SMARCD2-201ENST00000225742 TUBD1Q9UJT1 453 aa19.08■□□□□ 0.64
SMARCD2-201ENST00000225742 MMP7P09237 267 aaPredicted RBP19.07■□□□□ 0.64
SMARCD2-201ENST00000225742 PDZK1IP1Q13113 114 aa19.07■□□□□ 0.64
SMARCD2-201ENST00000225742 RSPO4Q2I0M5 234 aaPredicted RBP19.07■□□□□ 0.64
SMARCD2-201ENST00000225742 TIPARPQ7Z3E1 657 aaKnown RBP19.07■□□□□ 0.64
SMARCD2-201ENST00000225742 HDHD3Q9BSH5 251 aaPredicted RBP19.07■□□□□ 0.64
SMARCD2-201ENST00000225742 C1QTNF5Q9BXJ0 243 aa19.07■□□□□ 0.64
SMARCD2-201ENST00000225742 KCNIP3Q9Y2W7 256 aa19.07■□□□□ 0.64
SMARCD2-201ENST00000225742 PMS2P1A4D2B8 440 aa19.07■□□□□ 0.64
SMARCD2-201ENST00000225742 MSGN1A6NI15 193 aa19.07■□□□□ 0.64
SMARCD2-201ENST00000225742 KCNAB3O43448 404 aa19.07■□□□□ 0.64
SMARCD2-201ENST00000225742 FOXO1Q12778 655 aa19.07■□□□□ 0.64
SMARCD2-201ENST00000225742 SMCO1Q147U7 214 aa19.07■□□□□ 0.64
SMARCD2-201ENST00000225742 PSMF1Q92530 271 aa19.07■□□□□ 0.64
SMARCD2-201ENST00000225742 SAT2Q96F10 170 aaPredicted RBP19.07■□□□□ 0.64
SMARCD2-201ENST00000225742 LRRC46Q96FV0 321 aa19.07■□□□□ 0.64
SMARCD2-201ENST00000225742 FAM173AQ9BQD7 235 aa19.07■□□□□ 0.64
SMARCD2-201ENST00000225742 PRDM6Q9NQX0 595 aa19.07■□□□□ 0.64
SMARCD2-201ENST00000225742 GSKIPQ9P0R6 139 aa19.07■□□□□ 0.64
SMARCD2-201ENST00000225742 MSTNO14793 375 aa19.06■□□□□ 0.64
SMARCD2-201ENST00000225742 SFTPBP07988 381 aa19.06■□□□□ 0.64
SMARCD2-201ENST00000225742 ZNF728P0DKX0 622 aa19.06■□□□□ 0.64
SMARCD2-201ENST00000225742 ZNF92Q03936 586 aa19.06■□□□□ 0.64
SMARCD2-201ENST00000225742 IAH1Q2TAA2 248 aaPredicted RBP19.06■□□□□ 0.64
SMARCD2-201ENST00000225742 IL34Q6ZMJ4 242 aa19.06■□□□□ 0.64
SMARCD2-201ENST00000225742 GUCD1Q96NT3 240 aa19.06■□□□□ 0.64
SMARCD2-201ENST00000225742 SULT4A1Q9BR01 284 aa19.06■□□□□ 0.64
SMARCD2-201ENST00000225742 SPRY4Q9C004 299 aa19.06■□□□□ 0.64
SMARCD2-201ENST00000225742 ZNF850A8MQ14 1090 aa19.05■□□□□ 0.64
SMARCD2-201ENST00000225742 PATE4P0C8F1 98 aa19.05■□□□□ 0.64
SMARCD2-201ENST00000225742 FAM157CP0CG43 387 aa19.05■□□□□ 0.64
SMARCD2-201ENST00000225742 S100A10P60903 97 aa19.05■□□□□ 0.64
SMARCD2-201ENST00000225742 GALNT14Q96FL9 552 aa19.05■□□□□ 0.64
SMARCD2-201ENST00000225742 ZNF286AQ9HBT8 521 aa19.05■□□□□ 0.64
SMARCD2-201ENST00000225742 MMP26Q9NRE1 261 aa19.05■□□□□ 0.64
SMARCD2-201ENST00000225742 PARPBPQ9NWS1 579 aa19.05■□□□□ 0.64
SMARCD2-201ENST00000225742 B4GALT7Q9UBV7 327 aa19.05■□□□□ 0.64
SMARCD2-201ENST00000225742 COLQQ9Y215 455 aaPredicted RBP19.05■□□□□ 0.64
SMARCD2-201ENST00000225742 TMEM218A2RU14 115 aa19.04■□□□□ 0.64
SMARCD2-201ENST00000225742 PINLYPA6NC86 204 aa19.04■□□□□ 0.64
SMARCD2-201ENST00000225742 PDCD6O75340 191 aa19.04■□□□□ 0.64
SMARCD2-201ENST00000225742 ATF4P18848 351 aaPredicted RBP19.04■□□□□ 0.64
SMARCD2-201ENST00000225742 UCP3P55916 312 aa19.04■□□□□ 0.64
SMARCD2-201ENST00000225742 SIGLEC14Q08ET2 396 aa19.04■□□□□ 0.64
SMARCD2-201ENST00000225742 MALLQ13021 153 aa19.04■□□□□ 0.64
SMARCD2-201ENST00000225742 PLCXD3Q63HM9 321 aa19.04■□□□□ 0.64
SMARCD2-201ENST00000225742 TMEM211Q6ICI0 200 aa19.04■□□□□ 0.64
SMARCD2-201ENST00000225742 COLCA1Q6ZS62 124 aa19.04■□□□□ 0.64
SMARCD2-201ENST00000225742 RAB11FIP2Q7L804 512 aa19.04■□□□□ 0.64
SMARCD2-201ENST00000225742 OR10AD1Q8NGE0 317 aa19.04■□□□□ 0.64
SMARCD2-201ENST00000225742 OR51F2Q8NH61 342 aa19.04■□□□□ 0.64
SMARCD2-201ENST00000225742 FGFBP3Q8TAT2 258 aa19.04■□□□□ 0.64
SMARCD2-201ENST00000225742 ADAMTS17Q8TE56 1095 aa19.04■□□□□ 0.64
SMARCD2-201ENST00000225742 SUCNR1Q9BXA5 334 aa19.04■□□□□ 0.64
SMARCD2-201ENST00000225742 NAA60Q9H7X0 242 aa19.04■□□□□ 0.64
SMARCD2-201ENST00000225742 C12orf4Q9NQ89 552 aa19.04■□□□□ 0.64
SMARCD2-201ENST00000225742 LRFN1Q9P244 771 aa19.04■□□□□ 0.64
SMARCD2-201ENST00000225742 IGKV1-12A0A0C4DH73 117 aa19.04■□□□□ 0.64
SMARCD2-201ENST00000225742 FAM90A10PA6NDY2 464 aa19.04■□□□□ 0.64
SMARCD2-201ENST00000225742 FAM90A18PA6NE21 464 aa19.04■□□□□ 0.64
SMARCD2-201ENST00000225742 FAM90A16PA6NEW6 464 aa19.04■□□□□ 0.64
SMARCD2-201ENST00000225742 FAM90A20PA6NIJ5 464 aa19.04■□□□□ 0.64
SMARCD2-201ENST00000225742 FAM90A8PA6NJQ4 464 aa19.04■□□□□ 0.64
SMARCD2-201ENST00000225742 FAM90A7PA6NKC0 464 aa19.04■□□□□ 0.64
SMARCD2-201ENST00000225742 FAM90A22PA8MWA6 464 aa19.04■□□□□ 0.64
SMARCD2-201ENST00000225742 FAM90A12PA8MX19 464 aa19.04■□□□□ 0.64
SMARCD2-201ENST00000225742 FAM90A5PA8MXJ8 464 aa19.04■□□□□ 0.64
SMARCD2-201ENST00000225742 FAM90A23PA8MXZ1 464 aa19.04■□□□□ 0.64
SMARCD2-201ENST00000225742 IGKV1D-12P01611 117 aa19.04■□□□□ 0.64
SMARCD2-201ENST00000225742 FAM90A15PP0C7V4 464 aa19.04■□□□□ 0.64
SMARCD2-201ENST00000225742 FAM90A13PP0C7W8 464 aa19.04■□□□□ 0.64
SMARCD2-201ENST00000225742 FAM90A14PP0C7W9 464 aa19.04■□□□□ 0.64
SMARCD2-201ENST00000225742 FAM90A24PP0C7X0 464 aa19.04■□□□□ 0.64
SMARCD2-201ENST00000225742 HKR1P10072 659 aa19.04■□□□□ 0.64
SMARCD2-201ENST00000225742 ZNF708P17019 499 aa19.04■□□□□ 0.64
SMARCD2-201ENST00000225742 TMEM200AQ86VY9 491 aa19.04■□□□□ 0.64
SMARCD2-201ENST00000225742 FBXL14Q8N1E6 418 aa19.04■□□□□ 0.64
SMARCD2-201ENST00000225742 LRTM2Q8N967 370 aa19.04■□□□□ 0.64
SMARCD2-201ENST00000225742 BHLHE23Q8NDY6 225 aa19.04■□□□□ 0.64
SMARCD2-201ENST00000225742 TMED6Q8WW62 240 aa19.04■□□□□ 0.64
SMARCD2-201ENST00000225742 ACKR4Q9NPB9 350 aa19.04■□□□□ 0.64
SMARCD2-201ENST00000225742 ZFP57Q9NU63 452 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms