RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 MRPL58Q14197 206 aaKnown RBP9.34□□□□□ -0.91
VCL-201ENST00000211998 FZD2Q14332 565 aa9.34□□□□□ -0.91
VCL-201ENST00000211998 SLC25A42Q86VD7 318 aa9.34□□□□□ -0.91
VCL-201ENST00000211998 OR10G8Q8NGN5 311 aa9.34□□□□□ -0.91
VCL-201ENST00000211998 OIT3Q8WWZ8 545 aa9.34□□□□□ -0.91
VCL-201ENST00000211998 HIST1H2BAQ96A08 127 aa9.34□□□□□ -0.91
VCL-201ENST00000211998 CHST6Q9GZX3 395 aa9.34□□□□□ -0.91
VCL-201ENST00000211998 KCNK15Q9H427 330 aa9.34□□□□□ -0.91
VCL-201ENST00000211998 C6orf106Q9H6K1 298 aaPredicted RBP9.34□□□□□ -0.91
VCL-201ENST00000211998 H0YIG0 161 aa9.34□□□□□ -0.91
VCL-201ENST00000211998 P2RY1P47900 373 aa9.34□□□□□ -0.91
VCL-201ENST00000211998 EDDM3BP56851 147 aa9.34□□□□□ -0.91
VCL-201ENST00000211998 CD300LDQ6UXZ3 194 aa9.34□□□□□ -0.91
VCL-201ENST00000211998 MORN4Q8NDC4 146 aa9.34□□□□□ -0.91
VCL-201ENST00000211998 CPEB3Q8NE35 698 aaKnown RBP9.34□□□□□ -0.91
VCL-201ENST00000211998 EGLN1Q9GZT9 426 aa9.34□□□□□ -0.91
VCL-201ENST00000211998 FOXJ2Q9P0K8 574 aa9.34□□□□□ -0.91
VCL-201ENST00000211998 VAX2Q9UIW0 290 aa9.34□□□□□ -0.91
VCL-201ENST00000211998 IGLV3-27P01718 113 aa9.33□□□□□ -0.92
VCL-201ENST00000211998 OR5AC1P0C628 307 aa9.33□□□□□ -0.92
VCL-201ENST00000211998 RCC1P18754 421 aaPredicted RBP9.33□□□□□ -0.92
VCL-201ENST00000211998 CAMPP49913 170 aa9.33□□□□□ -0.92
VCL-201ENST00000211998 EMDP50402 254 aa9.33□□□□□ -0.92
VCL-201ENST00000211998 Q56UQ5 140 aa9.33□□□□□ -0.92
VCL-201ENST00000211998 BHLHE23Q8NDY6 225 aa9.33□□□□□ -0.92
VCL-201ENST00000211998 OR10G4Q8NGN3 311 aa9.33□□□□□ -0.92
VCL-201ENST00000211998 OR10G9Q8NGN4 311 aa9.33□□□□□ -0.92
VCL-201ENST00000211998 OR10G7Q8NGN6 311 aa9.33□□□□□ -0.92
VCL-201ENST00000211998 MVB12AQ96EY5 273 aa9.33□□□□□ -0.92
VCL-201ENST00000211998 RAB40CQ96S21 281 aa9.33□□□□□ -0.92
VCL-201ENST00000211998 HSPB9Q9BQS6 159 aa9.33□□□□□ -0.92
VCL-201ENST00000211998 RIMS4Q9H426 269 aaPredicted RBP9.33□□□□□ -0.92
VCL-201ENST00000211998 NAA60Q9H7X0 242 aa9.33□□□□□ -0.92
VCL-201ENST00000211998 UBE2ZQ9H832 354 aaPredicted RBP9.33□□□□□ -0.92
VCL-201ENST00000211998 ST3GAL6Q9Y274 331 aa9.33□□□□□ -0.92
VCL-201ENST00000211998 CD22P20273 847 aa9.33□□□□□ -0.92
VCL-201ENST00000211998 CSN1S1P47710 185 aa9.33□□□□□ -0.92
VCL-201ENST00000211998 PAFAH1B2P68402 229 aa9.33□□□□□ -0.92
VCL-201ENST00000211998 BTG2P78543 158 aa9.33□□□□□ -0.92
VCL-201ENST00000211998 EDDM3AQ14507 147 aa9.33□□□□□ -0.92
VCL-201ENST00000211998 OR8B8Q15620 311 aa9.33□□□□□ -0.92
VCL-201ENST00000211998 DMKNQ6E0U4 476 aaPredicted RBP9.33□□□□□ -0.92
VCL-201ENST00000211998 NUFIP2Q7Z417 695 aaKnown RBP9.33□□□□□ -0.92
VCL-201ENST00000211998 CDC20BQ86Y33 519 aa9.33□□□□□ -0.92
VCL-201ENST00000211998 TBC1D29Q9UFV1 150 aa9.33□□□□□ -0.92
VCL-201ENST00000211998 B9D1Q9UPM9 204 aa9.33□□□□□ -0.92
VCL-201ENST00000211998 NEU3Q9UQ49 428 aa9.33□□□□□ -0.92
VCL-201ENST00000211998 N4BP2Q86UW6 1770 aaPredicted RBP9.33□□□□□ -0.92
VCL-201ENST00000211998 A0A1B0GTH9 108 aa9.33□□□□□ -0.92
VCL-201ENST00000211998 MBPP02686 304 aaPredicted RBP9.33□□□□□ -0.92
VCL-201ENST00000211998 FAM3BP58499 235 aaPredicted RBP9.33□□□□□ -0.92
VCL-201ENST00000211998 FAM219AQ8IW50 185 aa9.33□□□□□ -0.92
VCL-201ENST00000211998 OTOSQ8NHW6 89 aa9.33□□□□□ -0.92
VCL-201ENST00000211998 BAHD1Q8TBE0 780 aaPredicted RBP9.33□□□□□ -0.92
VCL-201ENST00000211998 SMIM12Q96EX1 92 aa9.33□□□□□ -0.92
VCL-201ENST00000211998 RTL8AQ9BWD3 113 aa9.33□□□□□ -0.92
VCL-201ENST00000211998 PDFQ9HBH1 243 aa9.33□□□□□ -0.92
VCL-201ENST00000211998 SIGLEC7Q9Y286 467 aa9.33□□□□□ -0.92
VCL-201ENST00000211998 KLF13Q9Y2Y9 288 aaPredicted RBP9.33□□□□□ -0.92
VCL-201ENST00000211998 LRP12Q9Y561 859 aa9.33□□□□□ -0.92
VCL-201ENST00000211998 KCNE3Q9Y6H6 103 aa9.33□□□□□ -0.92
VCL-201ENST00000211998 KIF13AQ9H1H9 1805 aa9.33□□□□□ -0.92
VCL-201ENST00000211998 PGA4P0DJD7 388 aa9.33□□□□□ -0.92
VCL-201ENST00000211998 PGA5P0DJD9 388 aa9.33□□□□□ -0.92
VCL-201ENST00000211998 SHHQ15465 462 aa9.33□□□□□ -0.92
VCL-201ENST00000211998 TMEM255AQ5JRV8 349 aa9.33□□□□□ -0.92
VCL-201ENST00000211998 ACSM6Q6P461 480 aa9.33□□□□□ -0.92
VCL-201ENST00000211998 C16orf82Q7Z2V1 217 aa9.33□□□□□ -0.92
VCL-201ENST00000211998 KMT5CQ86Y97 462 aa9.33□□□□□ -0.92
VCL-201ENST00000211998 MAP1LC3CQ9BXW4 147 aa9.33□□□□□ -0.92
VCL-201ENST00000211998 CXorf51AA0A1B0GTR3 108 aa9.32□□□□□ -0.92
VCL-201ENST00000211998 MYOGP15173 224 aa9.32□□□□□ -0.92
VCL-201ENST00000211998 Q5BKY6 102 aa9.32□□□□□ -0.92
VCL-201ENST00000211998 UBALD2Q8IYN6 164 aa9.32□□□□□ -0.92
VCL-201ENST00000211998 LAT2Q9GZY6 243 aa9.32□□□□□ -0.92
VCL-201ENST00000211998 LSM2Q9Y333 95 aaKnown RBP9.32□□□□□ -0.92
VCL-201ENST00000211998 TGIF2-C20orf24A0A0A6YYL0 155 aa9.32□□□□□ -0.92
VCL-201ENST00000211998 IGLV3-25P01717 112 aa9.32□□□□□ -0.92
VCL-201ENST00000211998 SOD3P08294 240 aa9.32□□□□□ -0.92
VCL-201ENST00000211998 SRFP11831 508 aa9.32□□□□□ -0.92
VCL-201ENST00000211998 MMP9P14780 707 aa9.32□□□□□ -0.92
VCL-201ENST00000211998 CDC34P49427 236 aaPredicted RBP9.32□□□□□ -0.92
VCL-201ENST00000211998 SUB1P53999 127 aaKnown RBP eCLIP9.32□□□□□ -0.923e-6■□□□□ 9.7
VCL-201ENST00000211998 BCORP1Q8N888 145 aa9.32□□□□□ -0.92
VCL-201ENST00000211998 LANCL2Q9NS86 450 aa9.32□□□□□ -0.92
VCL-201ENST00000211998 C3orf85A0A1B0GTC6 90 aa9.32□□□□□ -0.92
VCL-201ENST00000211998 A0A1B0GV72 72 aa9.32□□□□□ -0.92
VCL-201ENST00000211998 IFITM10A6NMD0 228 aa9.32□□□□□ -0.92
VCL-201ENST00000211998 VSIG10L2P0DP72 767 aa9.32□□□□□ -0.92
VCL-201ENST00000211998 HTR1DP28221 377 aa9.32□□□□□ -0.92
VCL-201ENST00000211998 TCL1AP56279 114 aa9.32□□□□□ -0.92
VCL-201ENST00000211998 LGALS4P56470 323 aa9.32□□□□□ -0.92
VCL-201ENST00000211998 NAAAQ02083 359 aa9.32□□□□□ -0.92
VCL-201ENST00000211998 KIAA0040Q15053 153 aa9.32□□□□□ -0.92
VCL-201ENST00000211998 ZNF718Q3SXZ3 478 aa9.32□□□□□ -0.92
VCL-201ENST00000211998 EIF4E3Q8N5X7 224 aaKnown RBP9.32□□□□□ -0.92
VCL-201ENST00000211998 DUSP13Q9UII6 198 aa9.32□□□□□ -0.92
VCL-201ENST00000211998 PMS2P1A4D2B8 440 aa9.32□□□□□ -0.92
VCL-201ENST00000211998 CXCL10P02778 98 aa9.32□□□□□ -0.92
VCL-201ENST00000211998 SEC11BP0C7V7 166 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms