RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 KLK3P07288 261 aaPredicted RBP13.18□□□□□ -0.3
EFNB1-201ENST00000204961 HGFACQ04756 655 aa13.18□□□□□ -0.3
EFNB1-201ENST00000204961 GGNBP1Q5YKI7 109 aa13.18□□□□□ -0.3
EFNB1-201ENST00000204961 TCEAL6Q6IPX3 200 aa13.18□□□□□ -0.3
EFNB1-201ENST00000204961 DOK3Q7L591 496 aa13.18□□□□□ -0.3
EFNB1-201ENST00000204961 EIF4E3Q8N5X7 224 aaKnown RBP13.18□□□□□ -0.3
EFNB1-201ENST00000204961 ABHD3Q8WU67 409 aa13.18□□□□□ -0.3
EFNB1-201ENST00000204961 TCEAL3Q969E4 200 aa13.18□□□□□ -0.3
EFNB1-201ENST00000204961 SRXN1Q9BYN0 137 aa13.18□□□□□ -0.3
EFNB1-201ENST00000204961 IL36RNQ9UBH0 155 aa13.18□□□□□ -0.3
EFNB1-201ENST00000204961 TNRC18O15417 2968 aaPredicted RBP13.17□□□□□ -0.3
EFNB1-201ENST00000204961 A0A1W2PR80 420 aa13.17□□□□□ -0.3
EFNB1-201ENST00000204961 PHF1O43189 567 aaPredicted RBP13.17□□□□□ -0.3
EFNB1-201ENST00000204961 DHHO43323 396 aa13.17□□□□□ -0.3
EFNB1-201ENST00000204961 SFTA3P0C7M3 94 aa13.17□□□□□ -0.3
EFNB1-201ENST00000204961 ZNF32P17041 273 aa13.17□□□□□ -0.3
EFNB1-201ENST00000204961 SHBQ15464 509 aa13.17□□□□□ -0.3
EFNB1-201ENST00000204961 BORCS8Q96FH0 119 aa13.17□□□□□ -0.3
EFNB1-201ENST00000204961 UQCC1Q9NVA1 299 aa13.17□□□□□ -0.3
EFNB1-201ENST00000204961 AK3Q9UIJ7 227 aa13.17□□□□□ -0.3
EFNB1-201ENST00000204961 NDUFS6O75380 124 aaKnown RBP13.17□□□□□ -0.3
EFNB1-201ENST00000204961 CHRM2P08172 466 aa13.17□□□□□ -0.3
EFNB1-201ENST00000204961 SGPP2Q8IWX5 399 aa13.17□□□□□ -0.3
EFNB1-201ENST00000204961 ZDHHC22Q8N966 263 aa13.17□□□□□ -0.3
EFNB1-201ENST00000204961 PADI1Q9ULC6 663 aa13.17□□□□□ -0.3
EFNB1-201ENST00000204961 DMXL2Q8TDJ6 3036 aa13.17□□□□□ -0.3
EFNB1-201ENST00000204961 TTLL8A6PVC2 850 aa13.16□□□□□ -0.3
EFNB1-201ENST00000204961 GPR37O15354 613 aa13.16□□□□□ -0.3
EFNB1-201ENST00000204961 FABP1P07148 127 aa13.16□□□□□ -0.3
EFNB1-201ENST00000204961 ACAA1P09110 424 aaPredicted RBP13.16□□□□□ -0.3
EFNB1-201ENST00000204961 SCAND1P57086 179 aa13.16□□□□□ -0.3
EFNB1-201ENST00000204961 RPS16P62249 146 aaKnown RBP13.16□□□□□ -0.3
EFNB1-201ENST00000204961 SLC25A47Q6Q0C1 308 aa13.16□□□□□ -0.3
EFNB1-201ENST00000204961 C17orf82Q86X59 251 aaPredicted RBP13.16□□□□□ -0.3
EFNB1-201ENST00000204961 C17orf78Q8N4C9 275 aa13.16□□□□□ -0.3
EFNB1-201ENST00000204961 GJC3Q8NFK1 279 aa13.16□□□□□ -0.3
EFNB1-201ENST00000204961 ZNF488Q96MN9 340 aa13.16□□□□□ -0.3
EFNB1-201ENST00000204961 CYTL1Q9NRR1 136 aa13.16□□□□□ -0.3
EFNB1-201ENST00000204961 URGCP-MRPS24S4R325 110 aa13.16□□□□□ -0.3
EFNB1-201ENST00000204961 USF3Q68DE3 2245 aa13.16□□□□□ -0.3
EFNB1-201ENST00000204961 TP53I11O14683 189 aa13.16□□□□□ -0.3
EFNB1-201ENST00000204961 IGLV3-19P01714 112 aa13.16□□□□□ -0.3
EFNB1-201ENST00000204961 NPBWR2P48146 333 aa13.16□□□□□ -0.3
EFNB1-201ENST00000204961 ZNF528Q3MIS6 628 aa13.16□□□□□ -0.3
EFNB1-201ENST00000204961 PLCXD3Q63HM9 321 aa13.16□□□□□ -0.3
EFNB1-201ENST00000204961 PNRC2Q9NPJ4 139 aaKnown RBP13.16□□□□□ -0.3
EFNB1-201ENST00000204961 ABCA1O95477 2261 aa13.16□□□□□ -0.3
EFNB1-201ENST00000204961 LOC390937A0A1W2PQ73 354 aa13.16□□□□□ -0.3
EFNB1-201ENST00000204961 CDRT15L2A8MXV6 281 aa13.16□□□□□ -0.3
EFNB1-201ENST00000204961 MFNGO00587 321 aa13.16□□□□□ -0.3
EFNB1-201ENST00000204961 CST7O76096 145 aa13.16□□□□□ -0.3
EFNB1-201ENST00000204961 CPT2P23786 658 aa13.16□□□□□ -0.3
EFNB1-201ENST00000204961 CEACAM16Q2WEN9 425 aa13.16□□□□□ -0.3
EFNB1-201ENST00000204961 LYSMD4Q5XG99 296 aa13.16□□□□□ -0.3
EFNB1-201ENST00000204961 RPS19BP1Q86WX3 136 aaKnown RBP13.16□□□□□ -0.3
EFNB1-201ENST00000204961 TDHQ8IZJ6 230 aa13.16□□□□□ -0.3
EFNB1-201ENST00000204961 OR52M1Q8NGK5 317 aa13.16□□□□□ -0.3
EFNB1-201ENST00000204961 ZNF700Q9H0M5 742 aa13.16□□□□□ -0.3
EFNB1-201ENST00000204961 MRPS17Q9Y2R5 130 aaKnown RBP13.16□□□□□ -0.3
EFNB1-201ENST00000204961 IFNA2P01563 188 aa13.15□□□□□ -0.3
EFNB1-201ENST00000204961 IFNA21P01568 189 aa13.15□□□□□ -0.3
EFNB1-201ENST00000204961 ZNF16P17020 682 aaPredicted RBP13.15□□□□□ -0.3
EFNB1-201ENST00000204961 FOXG1P55316 489 aaPredicted RBP13.15□□□□□ -0.3
EFNB1-201ENST00000204961 HOXA4Q00056 320 aaPredicted RBP13.15□□□□□ -0.3
EFNB1-201ENST00000204961 PEA15Q15121 130 aa13.15□□□□□ -0.3
EFNB1-201ENST00000204961 RSPO1Q2MKA7 263 aaPredicted RBP13.15□□□□□ -0.3
EFNB1-201ENST00000204961 DEGS2Q6QHC5 323 aa13.15□□□□□ -0.3
EFNB1-201ENST00000204961 SLC25A26Q70HW3 274 aa13.15□□□□□ -0.3
EFNB1-201ENST00000204961 LYPD6Q86Y78 171 aa13.15□□□□□ -0.3
EFNB1-201ENST00000204961 IFI44Q8TCB0 444 aa13.15□□□□□ -0.3
EFNB1-201ENST00000204961 GLYATL2Q8WU03 294 aa13.15□□□□□ -0.3
EFNB1-201ENST00000204961 IL1F10Q8WWZ1 152 aa13.15□□□□□ -0.3
EFNB1-201ENST00000204961 IP6K3Q96PC2 410 aa13.15□□□□□ -0.3
EFNB1-201ENST00000204961 HS3ST6Q96QI5 342 aa13.15□□□□□ -0.3
EFNB1-201ENST00000204961 ZFP57Q9NU63 452 aa13.15□□□□□ -0.3
EFNB1-201ENST00000204961 SLC2A8Q9NY64 477 aa13.15□□□□□ -0.3
EFNB1-201ENST00000204961 ST3GAL6Q9Y274 331 aa13.15□□□□□ -0.3
EFNB1-201ENST00000204961 PUS1Q9Y606 427 aaKnown RBP eCLIP13.15□□□□□ -0.3
EFNB1-201ENST00000204961 CHCHD2Q9Y6H1 151 aaPredicted RBP13.15□□□□□ -0.3
EFNB1-201ENST00000204961 CPAMD8Q8IZJ3 1885 aa13.15□□□□□ -0.3
EFNB1-201ENST00000204961 HSPB2A8KAH6 182 aa13.15□□□□□ -0.3
EFNB1-201ENST00000204961 IFI6P09912 130 aa13.15□□□□□ -0.3
EFNB1-201ENST00000204961 HSPB2Q16082 182 aa13.15□□□□□ -0.3
EFNB1-201ENST00000204961 SPINK14Q6IE38 97 aa13.15□□□□□ -0.3
EFNB1-201ENST00000204961 ADAM5Q6NVV9 412 aa13.15□□□□□ -0.3
EFNB1-201ENST00000204961 TMEM182Q6ZP80 229 aaPredicted RBP13.15□□□□□ -0.3
EFNB1-201ENST00000204961 DTWD2Q8NBA8 298 aa13.15□□□□□ -0.3
EFNB1-201ENST00000204961 SLC25A43Q8WUT9 341 aaPredicted RBP13.15□□□□□ -0.3
EFNB1-201ENST00000204961 RTN4IP1Q8WWV3 396 aaPredicted RBP13.15□□□□□ -0.3
EFNB1-201ENST00000204961 C2orf50Q96LR7 162 aa13.15□□□□□ -0.3
EFNB1-201ENST00000204961 CLCC1Q96S66 551 aa13.15□□□□□ -0.3
EFNB1-201ENST00000204961 ABHD14AQ9BUJ0 271 aa13.15□□□□□ -0.3
EFNB1-201ENST00000204961 HES7Q9BYE0 225 aa13.15□□□□□ -0.3
EFNB1-201ENST00000204961 SLC26A1Q9H2B4 701 aa13.15□□□□□ -0.3
EFNB1-201ENST00000204961 IGKV1-27A0A075B6S5 117 aa13.15□□□□□ -0.31
EFNB1-201ENST00000204961 NSG1A0A0A6YYJ2 146 aa13.15□□□□□ -0.31
EFNB1-201ENST00000204961 FAM166BA8MTA8 275 aa13.15□□□□□ -0.31
EFNB1-201ENST00000204961 TSPAN15O95858 294 aa13.15□□□□□ -0.31
EFNB1-201ENST00000204961 SLC25A4P12235 298 aa13.15□□□□□ -0.31
EFNB1-201ENST00000204961 ENDOGQ14249 297 aaKnown RBP13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms