RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 CHRM2P08172 466 aa11.45□□□□□ -0.58
CTNS-201ENST00000046640 CELA3AP09093 270 aa11.45□□□□□ -0.58
CTNS-201ENST00000046640 CD79AP11912 226 aa11.45□□□□□ -0.58
CTNS-201ENST00000046640 SPINK2P20155 84 aa11.45□□□□□ -0.58
CTNS-201ENST00000046640 FKBP2P26885 142 aaKnown RBP11.45□□□□□ -0.58
CTNS-201ENST00000046640 LPAR6P43657 344 aa11.45□□□□□ -0.58
CTNS-201ENST00000046640 SNU13P55769 128 aaKnown RBP11.45□□□□□ -0.58
CTNS-201ENST00000046640 MTCP1P56278 107 aa11.45□□□□□ -0.58
CTNS-201ENST00000046640 CLDN15P56746 228 aa11.45□□□□□ -0.58
CTNS-201ENST00000046640 TGIF1Q15583 401 aa11.45□□□□□ -0.58
CTNS-201ENST00000046640 ZNF239Q16600 458 aaKnown RBP11.45□□□□□ -0.58
CTNS-201ENST00000046640 IGSF11Q5DX21 431 aa11.45□□□□□ -0.58
CTNS-201ENST00000046640 C10orf128Q5T292 105 aa11.45□□□□□ -0.58
CTNS-201ENST00000046640 C6orf15Q6UXA7 325 aaPredicted RBP11.45□□□□□ -0.58
CTNS-201ENST00000046640 DTWD2Q8NBA8 298 aa11.45□□□□□ -0.58
CTNS-201ENST00000046640 THOC3Q96J01 351 aaKnown RBP11.45□□□□□ -0.58
CTNS-201ENST00000046640 CDC6Q99741 560 aa11.45□□□□□ -0.58
CTNS-201ENST00000046640 RTBDNQ9BSG5 229 aaPredicted RBP11.45□□□□□ -0.58
CTNS-201ENST00000046640 URM1Q9BTM9 101 aaKnown RBP11.45□□□□□ -0.58
CTNS-201ENST00000046640 TNRC6BQ9UPQ9 1833 aaKnown RBP11.45□□□□□ -0.58
CTNS-201ENST00000046640 GLAP06280 429 aa11.45□□□□□ -0.58
CTNS-201ENST00000046640 ZNF32P17041 273 aa11.45□□□□□ -0.58
CTNS-201ENST00000046640 CCL1P22362 96 aa11.45□□□□□ -0.58
CTNS-201ENST00000046640 ECH1Q13011 328 aa11.45□□□□□ -0.58
CTNS-201ENST00000046640 GGNQ86UU5 652 aa11.45□□□□□ -0.58
CTNS-201ENST00000046640 SLC30A7Q8NEW0 376 aa11.45□□□□□ -0.58
CTNS-201ENST00000046640 OR56B1Q8NGI3 324 aa11.45□□□□□ -0.58
CTNS-201ENST00000046640 C20orf24Q9BUV8 137 aa11.45□□□□□ -0.58
CTNS-201ENST00000046640 NMES1Q9C002 83 aa11.45□□□□□ -0.58
CTNS-201ENST00000046640 PLA2G3Q9NZ20 509 aa11.45□□□□□ -0.58
CTNS-201ENST00000046640 ZNF107Q9UII5 783 aaPredicted RBP11.45□□□□□ -0.58
CTNS-201ENST00000046640 LSM5Q9Y4Y9 91 aaKnown RBP11.45□□□□□ -0.58
CTNS-201ENST00000046640 LRRC3CA6NJW4 275 aa11.44□□□□□ -0.58
CTNS-201ENST00000046640 C9JQL5 133 aa11.44□□□□□ -0.58
CTNS-201ENST00000046640 F8VVB4 439 aa11.44□□□□□ -0.58
CTNS-201ENST00000046640 F8VWA3 439 aa11.44□□□□□ -0.58
CTNS-201ENST00000046640 SNAPINO95295 136 aa11.44□□□□□ -0.58
CTNS-201ENST00000046640 H2AFB1P0C5Y9 115 aa11.44□□□□□ -0.58
CTNS-201ENST00000046640 SFTA3P0C7M3 94 aa11.44□□□□□ -0.58
CTNS-201ENST00000046640 CCNOP22674 350 aa11.44□□□□□ -0.58
CTNS-201ENST00000046640 CYB561P49447 251 aa11.44□□□□□ -0.58
CTNS-201ENST00000046640 RAC3P60763 192 aa11.44□□□□□ -0.58
CTNS-201ENST00000046640 CEACAM16Q2WEN9 425 aa11.44□□□□□ -0.58
CTNS-201ENST00000046640 LINC00469Q8N7U9 141 aa11.44□□□□□ -0.58
CTNS-201ENST00000046640 DYRK2Q92630 601 aa11.44□□□□□ -0.58
CTNS-201ENST00000046640 SGCZQ96LD1 299 aa11.44□□□□□ -0.58
CTNS-201ENST00000046640 TAF9BQ9HBM6 251 aa11.44□□□□□ -0.58
CTNS-201ENST00000046640 FOXJ2Q9P0K8 574 aa11.44□□□□□ -0.58
CTNS-201ENST00000046640 IGKV1D-8A0A087WSZ0 117 aa11.44□□□□□ -0.58
CTNS-201ENST00000046640 FAM221AA4D161 298 aa11.44□□□□□ -0.58
CTNS-201ENST00000046640 HPNP05981 417 aa11.44□□□□□ -0.58
CTNS-201ENST00000046640 MPLP40238 635 aa11.44□□□□□ -0.58
CTNS-201ENST00000046640 HTR5AP47898 357 aa11.44□□□□□ -0.58
CTNS-201ENST00000046640 MEOX2P50222 304 aa11.44□□□□□ -0.58
CTNS-201ENST00000046640 RRADP55042 308 aa11.44□□□□□ -0.58
CTNS-201ENST00000046640 TAS2R31P59538 309 aa11.44□□□□□ -0.58
CTNS-201ENST00000046640 PJVKQ0ZLH3 352 aa11.44□□□□□ -0.58
CTNS-201ENST00000046640 TAF9Q16594 264 aa11.44□□□□□ -0.58
CTNS-201ENST00000046640 GPR137CQ8N3F9 429 aa11.44□□□□□ -0.58
CTNS-201ENST00000046640 SPTSSAQ969W0 71 aa11.44□□□□□ -0.58
CTNS-201ENST00000046640 MMP26Q9NRE1 261 aa11.44□□□□□ -0.58
CTNS-201ENST00000046640 LPAR3Q9UBY5 353 aa11.44□□□□□ -0.58
CTNS-201ENST00000046640 TTC28Q96AY4 2481 aa11.44□□□□□ -0.58
CTNS-201ENST00000046640 CFAP47Q6ZTR5 3102 aa11.44□□□□□ -0.58
CTNS-201ENST00000046640 MFNGO00587 321 aa11.43□□□□□ -0.58
CTNS-201ENST00000046640 NR2C1P13056 603 aa11.43□□□□□ -0.58
CTNS-201ENST00000046640 CCL2P13500 99 aa11.43□□□□□ -0.58
CTNS-201ENST00000046640 SRD5A2P31213 254 aa11.43□□□□□ -0.58
CTNS-201ENST00000046640 CYCSP99999 105 aaKnown RBP11.43□□□□□ -0.58
CTNS-201ENST00000046640 LINC00696Q6ZRV3 163 aa11.43□□□□□ -0.58
CTNS-201ENST00000046640 REEP6Q96HR9 211 aa11.43□□□□□ -0.58
CTNS-201ENST00000046640 AKR1E2Q96JD6 320 aa11.43□□□□□ -0.58
CTNS-201ENST00000046640 LRFN1Q9P244 771 aa11.43□□□□□ -0.58
CTNS-201ENST00000046640 MED13Q9UHV7 2174 aa11.43□□□□□ -0.58
CTNS-201ENST00000046640 EP300Q09472 2414 aaPredicted RBP11.43□□□□□ -0.58
CTNS-201ENST00000046640 A0A096LPE4 126 aa11.43□□□□□ -0.58
CTNS-201ENST00000046640 A0A1W2PPZ6 126 aa11.43□□□□□ -0.58
CTNS-201ENST00000046640 FAM166BA8MTA8 275 aa11.43□□□□□ -0.58
CTNS-201ENST00000046640 APOC1P02654 83 aa11.43□□□□□ -0.58
CTNS-201ENST00000046640 DAOP14920 347 aa11.43□□□□□ -0.58
CTNS-201ENST00000046640 SP6Q3SY56 376 aa11.43□□□□□ -0.58
CTNS-201ENST00000046640 FAM27BQ5VT28 67 aa11.43□□□□□ -0.58
CTNS-201ENST00000046640 PEAR1Q5VY43 1037 aaPredicted RBP11.43□□□□□ -0.58
CTNS-201ENST00000046640 FAHD2BQ6P2I3 314 aaPredicted RBP11.43□□□□□ -0.58
CTNS-201ENST00000046640 PRSS54Q6PEW0 395 aa11.43□□□□□ -0.58
CTNS-201ENST00000046640 FAHD2AQ96GK7 314 aa11.43□□□□□ -0.58
CTNS-201ENST00000046640 NRIP2Q9BQI9 281 aa11.43□□□□□ -0.58
CTNS-201ENST00000046640 ZFP57Q9NU63 452 aa11.43□□□□□ -0.58
CTNS-201ENST00000046640 PLEKHJ1Q9NW61 149 aa11.43□□□□□ -0.58
CTNS-201ENST00000046640 LNP1A1A4G5 178 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 RNASEK-C17orf49H0YIS7 233 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 GSTP1P09211 210 aaKnown RBP11.42□□□□□ -0.58
CTNS-201ENST00000046640 OPRM1P35372 400 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 PPT1P50897 306 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 SNRPEP62304 92 aaKnown RBP11.42□□□□□ -0.58
CTNS-201ENST00000046640 S100A12P80511 92 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 IAH1Q2TAA2 248 aaPredicted RBP11.42□□□□□ -0.58
CTNS-201ENST00000046640 ZNF528Q3MIS6 628 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 CHRFAM7AQ494W8 412 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 FAM76BQ5HYJ3 339 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms