RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Swsap1Q8VCI7 278 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Olfr800Q8VFH7 311 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Olfr1459Q8VFV9 307 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Olfr969Q8VG89 311 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Olfr1346Q8VGH6 313 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Pcdhga3Q91XY5 928 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Hyal1Q91ZJ9 462 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Htra1Q9R118 480 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Slc25a53A2AF28 346 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 AI182371A2AS37 356 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 IqckD3YYL3 290 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Tmem44E9Q4M0 433 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Sc5dO88822 299 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 P01800 113 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Zfp13P10754 512 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Il5raP21183 415 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Rab1AP62821 205 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Mesp1P97309 243 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Lgals3bpQ07797 577 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Milr1Q3TB92 246 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 CrhbpQ60571 322 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Rab35Q6PHN9 201 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Fbxo5Q7TSG3 421 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Tmprss3Q8K1T0 453 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Cacul1Q8R0X2 377 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Pex16Q91XC9 336 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 GmppaQ922H4 420 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Hspb2Q99PR8 182 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Pga5Q9D106 387 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 1700034E13RikQ9D2T6 108 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Zfpl1Q9DB43 310 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Il21Q9ES17 146 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Sectm1bQ9JL59 212 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Clcf1Q9QZM3 225 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Rspo1Q9Z132 265 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Gm4858A0A0A6YWS7 318 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Zfp334A2A4U6 679 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Pusl1A2ADA5 291 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Gm3543D3Z235 184 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Olfr520E9Q518 316 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Irf2P23906 349 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Ear2P97425 156 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Tmprss11bQ14C59 416 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Gm14851Q5ERJ0 116 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 NmsQ5H8A1 153 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Prss33Q80WM7 277 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Slc25a44Q8BGF9 314 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Zfp52Q8BJ45 724 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Adgrg7Q8BM96 785 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Fam214bQ8BR27 538 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 TigarQ8BZA9 269 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 D330020A13RikQ8C799 211 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Q8CDS7 251 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 SptssaQ8R207 71 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Olfr1504Q8VFQ4 315 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Mrpl15Q9CPR5 295 aaKnown RBP7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Rpl7l1Q9D8M4 246 aaKnown RBP7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Lin37Q9D8N6 246 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Kcnmb4Q9JIN6 210 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Asah1Q9WV54 394 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Rbm24D3Z4I3 236 aaKnown RBP7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 Gm5796E9Q7M8 205 aa7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 Olfr173E9QAT7 321 aa7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 Ifi203O35368 408 aa7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 Igf2P09535 180 aa7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 Gon7P0C8B4 98 aa7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 P18532 116 aa7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 Pcbd1P61458 104 aa7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 Treml4Q3LRV9 263 aa7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 HpQ61646 347 aa7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 Uhrf2Q7TMI3 803 aa7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 QpctlQ8BH73 383 aa7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 ApehQ8R146 732 aa7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 Olfr518Q8VEW1 333 aa7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 Olfr980Q8VH08 310 aa7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 Znf672Q99LH4 468 aa7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 4930412O13RikQ9D5M9 106 aa7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 Ccdc107Q9DCC3 242 aa7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 Wdr61Q9ERF3 305 aa7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 Adam28Q9JLN6 793 aa7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 Ncor2Q9WU42 2472 aaKnown RBP7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 Gm29276A0A087WNW5 222 aa7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 Gm20792A0A087WRF5 222 aa7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 Gm28490A0A087WRT9 222 aa7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 Gm21996A0A087WSS9 222 aa7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 Olfr550E9Q544 316 aa7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 Prr27Q3SYJ2 352 aa7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 Trav6-2Q5R1I4 113 aa7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 Hormad2Q5SQP1 306 aa7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 Nxph2Q61199 261 aa7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 HepacamQ640R3 418 aa7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 Olfr1131Q7TR45 309 aa7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 Ticam1Q80UF7 732 aa7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 AardQ811W1 167 aa7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 9930022D16RikQ8BG27 128 aa7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 Zpld1Q8BGZ8 415 aa7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 Rnd1Q8BLR7 232 aa7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 Anapc10Q8K2H6 185 aa7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 AfmidQ8K4H1 305 aa7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 Nkd2Q8VE28 461 aa7.59□□□□□ -1.19
Retrieved 100 of 22,080 RNA–protein pairs in 23.2 ms