RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Cml5Q9QXS8 227 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 SrpxQ9R0M3 464 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Gabrg1Q9R0Y8 465 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Olfr69E9Q7C5 316 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Cbfa2t3O54972 620 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 PilrbQ2YFS2 224 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 XylbQ3TNA1 551 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 P2rx3Q3UR32 397 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Prss34Q80UR4 318 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Gm9881Q8BR56 211 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Sntb1Q99L88 537 aaKnown RBP10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Ifna1P01572 189 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 CtsaP16675 474 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Defa11P50709 85 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 SlbpP97440 275 aaKnown RBP10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Olfr1384Q8VFA8 318 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 HraslsQ9QZU4 167 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Gm17087V9GXQ2 156 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 CroccQ8CJ40 2009 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Rab1AP62821 205 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Barhl1P63157 327 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Ttyh2Q3TH73 532 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Prrc1Q3UPH1 443 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Lyg2Q3V1I0 213 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 SrmQ64674 302 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Olfr843Q7TRG4 313 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Nob1Q8BW10 403 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Msmo1Q9CRA4 293 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Olfr888Q9EQA5 314 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Tsga8Q9JJL0 238 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Mtg2A2AFK4 405 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Csf3P09920 208 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Mas1P30554 324 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Sstr2P30875 369 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 HccsP53702 272 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 FrzbP97401 323 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 CybaQ61462 192 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 St8sia4Q64692 359 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Fahd1Q8R0F8 227 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Teddm3Q9CQH1 294 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Fam166aQ9D4K5 319 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 NgbQ9ER97 151 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Vmn1r7E9Q8T0 311 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Zfp141G3UY09 685 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Vmn1r67G5E8C1 305 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Gm20834J3QM72 227 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Kcnj15O88932 375 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Ptpn6P29351 595 aaKnown RBP10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 B430306N03RikQ6QX36 289 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Olfr1141Q8VFQ7 311 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Olfr1466Q8VFW4 310 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Olfr974Q8VH09 310 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 SclyQ9JLI6 432 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Olfr913E9Q716 312 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 ClppO88696 272 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Gm5113Q3UGK8 141 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 CebpeQ6PZD9 281 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Fn3krpQ8K274 309 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Poldip2Q91VA6 368 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Dmbx1Q91ZK4 381 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Slc33a1Q99J27 550 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 ThadaA8C756 1938 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Vmn1r103K7N6X7 305 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Vmn1r122K7N726 305 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Vmn1r151L7N288 305 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Rce1P57791 329 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Cd55bQ61476 407 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Cypt4Q6P925 153 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Olfr678Q8VG26 313 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Gm9817Q9D2M0 144 aa10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Ldb3Q9JKS4 723 aaKnown RBP10.62□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Fnd3c2A2AP83 941 aa10.61□□□□□ -0.71
Pcif1-201ENSMUST00000041643 BC048679D3YXE9 172 aa10.61□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Olfr248E9Q1L6 309 aa10.61□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Vmn1r121K7N6J4 314 aa10.61□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Prdx6O08709 224 aaKnown RBP10.61□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Mtnd4lP03903 98 aa10.61□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Gpr143P70259 405 aa10.61□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Gcnt2P97402 401 aa10.61□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Nhlrc4Q3UP44 136 aa10.61□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Ccdc190Q3URK1 288 aa10.61□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Olfr1111Q7TR55 312 aa10.61□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Olfr517Q7TRU4 314 aa10.61□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Lrrc25Q8K1T1 297 aa10.61□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Olfr1130A0A1L1SQT2 314 aa10.61□□□□□ -0.71
Pcif1-201ENSMUST00000041643 AgmatA2AS89 358 aa10.61□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Ccdc188F6WEU2 249 aa10.61□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Gm21767J3QPV5 180 aa10.61□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Tnfrsf1aP25118 454 aa10.61□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Gpr83P30731 423 aa10.61□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Bmp8aP34821 399 aa10.61□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Tnfsf10P50592 291 aa10.61□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Pitx2P97474 317 aa10.61□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Slc22a27Q76M72 551 aa10.61□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Lrrc75aQ7TSF4 339 aa10.61□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Fate1Q8CEK7 99 aa10.61□□□□□ -0.71
Pcif1-201ENSMUST00000041643 V1ra11Q8R2E6 318 aa10.61□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Olfr979Q8VH10 311 aa10.61□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Vmn1r45Q8VIC7 318 aa10.61□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Dusp22Q99N11 184 aa10.61□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 27.7 ms