RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Vmn1r173E9Q8V7 313 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 DaoP18894 345 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Uck1P52623 277 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Ube2fbQ3UWQ3 185 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Nxph1Q61200 271 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Tas2r116Q7M713 305 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Prss54Q7M756 383 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Clvs2Q8BG92 327 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Dusp28Q8BTR5 163 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Med19Q8C1S0 244 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 LiphQ8CIV3 451 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Mic13Q8R404 119 aaKnown RBP9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr998Q8VF76 314 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr803Q8VFI3 308 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr1459Q8VFV9 307 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Lypd2Q9DD23 127 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Galnt16Q9JJ61 558 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 CntrlA2AL36 2334 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Gm28729A0A1B0GSW2 409 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Pira2F8VQ94 680 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Vmn2r82G3UWA2 865 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Gm20403G3UYB0 123 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Raet1aO08602 253 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Raet1bO08603 253 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Itgb2P11835 771 aaKnown RBP9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Znf271P15620 580 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Rims4P60191 269 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 FrzbP97401 323 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Smn1P97801 288 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Cass4Q08EC4 804 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 XylbQ3TNA1 551 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Tmem255bQ5FW56 369 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Gnb3Q61011 340 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr108Q8VFA1 320 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 AhspQ9CY02 102 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Mfsd4b2Q9D8I5 366 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Sdf2Q9DCT5 211 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 I0C0044D17RikA6PWL3 169 aa9.27□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Vmn1r34G3XA52 309 aa9.27□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 NrasP08556 189 aa9.27□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Adra2cQ01337 458 aa9.27□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Osgin2Q3TEE9 550 aa9.27□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Prmt8Q6PAK3 394 aa9.27□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Rcor3Q6PGA0 451 aa9.27□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr506Q7TRU6 314 aa9.27□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Tmem56Q8CGF5 276 aa9.27□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Agpat2Q8K3K7 278 aa9.27□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr1141Q8VFQ7 311 aa9.27□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Cpn1Q9JJN5 457 aa9.27□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Plekhb1Q9QYE9 243 aa9.27□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Timm8a1Q9WVA2 97 aa9.27□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Bcorl1A2AQH4 1781 aa9.27□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr1471F6QVZ8 314 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Gm20696H3BJN7 74 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 P01735 133 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr733Q14AK5 308 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 PilrbQ2YFS2 224 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr142Q60881 305 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Rps27Q6ZWU9 84 aaKnown RBP9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Ceacam14Q78Y72 263 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Nsun3Q8CCT7 348 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Slc24a4Q8CGQ8 622 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Il34Q8R1R4 235 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 St3gal6Q8VIB3 329 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Btf3l4Q9CQH7 158 aaKnown RBP9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Mpped2Q9CZJ0 294 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Lysmd1Q9D0E3 226 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr585E9PXW4 318 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr1348F6VB59 318 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 P01809 118 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Gpm6aP35802 278 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Ube2iP63280 158 aaKnown RBP9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Has2P70312 552 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Dok1P97465 482 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 ScimpQ3UU41 150 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Cyb561Q60720 250 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Hamp2Q80T19 83 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 TMEM229BQ8BFQ2 167 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Znf8Q8BGV5 572 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Slc25a41Q8BVN7 312 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Zfp459Q8BZ17 267 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 P2rx2Q8K3P1 485 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr486Q8VFD0 314 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr1297Q8VGE8 312 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Poldip2Q91VA6 368 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 HaghQ99KB8 309 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Magt1Q9CQY5 335 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 SlirpQ9D8T7 112 aaKnown RBP9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 TrilQ9DBY4 809 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Nudt22Q9DD16 308 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Wwtr1Q9EPK5 395 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Plekha3Q9ERS4 297 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Ralgapa2A3KGS3 1872 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Trav8n-2A0A075B633 112 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr721-ps1A0A140T8T9 324 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Gm29776A0A286YEC0 699 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Dmrtb1A2A9I7 359 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr608E9Q564 316 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Gm21818J3KMS6 170 aa9.27□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Il1r1P13504 576 aa9.27□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 65.9 ms