RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 C4orf36Q96KX1 117 aa12.43□□□□□ -0.42
PHGDH-231ENST00000641939 WDFY2Q96P53 400 aa12.43□□□□□ -0.42
PHGDH-231ENST00000641939 ALG8Q9BVK2 526 aa12.43□□□□□ -0.42
PHGDH-231ENST00000641939 CNTD2Q9H8S5 307 aa12.43□□□□□ -0.42
PHGDH-231ENST00000641939 ESM1Q9NQ30 184 aa12.43□□□□□ -0.42
PHGDH-231ENST00000641939 C8orf4Q9NR00 106 aa12.43□□□□□ -0.42
PHGDH-231ENST00000641939 INPP5EQ9NRR6 644 aa12.43□□□□□ -0.42
PHGDH-231ENST00000641939 FRRS1LQ9P0K9 344 aa12.43□□□□□ -0.42
PHGDH-231ENST00000641939 MYRFQ9Y2G1 1151 aa12.43□□□□□ -0.42
PHGDH-231ENST00000641939 POLDIP2Q9Y2S7 368 aa12.43□□□□□ -0.42
PHGDH-231ENST00000641939 RPL36Q9Y3U8 105 aaKnown RBP12.43□□□□□ -0.42
PHGDH-231ENST00000641939 TENM1Q9UKZ4 2725 aa12.43□□□□□ -0.42
PHGDH-231ENST00000641939 IGKV1D-17A0A075B6S4 117 aa12.42□□□□□ -0.42
PHGDH-231ENST00000641939 SIGLEC5O15389 551 aa12.42□□□□□ -0.42
PHGDH-231ENST00000641939 SYNGR1O43759 233 aa12.42□□□□□ -0.42
PHGDH-231ENST00000641939 NOS1APO75052 506 aaPredicted RBP12.42□□□□□ -0.42
PHGDH-231ENST00000641939 SERPINA3P01011 423 aa12.42□□□□□ -0.42
PHGDH-231ENST00000641939 IGHA1P01876 353 aa12.42□□□□□ -0.42
PHGDH-231ENST00000641939 TFF1P04155 84 aa12.42□□□□□ -0.42
PHGDH-231ENST00000641939 ISG15P05161 165 aa12.42□□□□□ -0.42
PHGDH-231ENST00000641939 PSG2P11465 335 aa12.42□□□□□ -0.42
PHGDH-231ENST00000641939 SELLP14151 372 aa12.42□□□□□ -0.42
PHGDH-231ENST00000641939 MPZP25189 248 aa12.42□□□□□ -0.42
PHGDH-231ENST00000641939 GABRA2P47869 451 aa12.42□□□□□ -0.42
PHGDH-231ENST00000641939 CCR9P51686 369 aa12.42□□□□□ -0.42
PHGDH-231ENST00000641939 BPIFB3P59826 476 aa12.42□□□□□ -0.42
PHGDH-231ENST00000641939 NANOS3P60323 173 aaKnown RBP12.42□□□□□ -0.42
PHGDH-231ENST00000641939 ARF6P62330 175 aa12.42□□□□□ -0.42
PHGDH-231ENST00000641939 UBE2V2Q15819 145 aa12.42□□□□□ -0.42
PHGDH-231ENST00000641939 DGUOKQ16854 277 aa12.42□□□□□ -0.42
PHGDH-231ENST00000641939 LRRC36Q1X8D7 754 aa12.42□□□□□ -0.42
PHGDH-231ENST00000641939 SMIM21Q3B7S5 101 aa12.42□□□□□ -0.42
PHGDH-231ENST00000641939 KLHL22Q53GT1 634 aa12.42□□□□□ -0.42
PHGDH-231ENST00000641939 LPCAT4Q643R3 524 aa12.42□□□□□ -0.42
PHGDH-231ENST00000641939 ACP7Q6ZNF0 438 aa12.42□□□□□ -0.42
PHGDH-231ENST00000641939 EGFL6Q8IUX8 553 aa12.42□□□□□ -0.42
PHGDH-231ENST00000641939 PACRGLQ8N7B6 248 aa12.42□□□□□ -0.42
PHGDH-231ENST00000641939 LY6G5BQ8NDX9 201 aa12.42□□□□□ -0.42
PHGDH-231ENST00000641939 TRMT10AQ8TBZ6 339 aaKnown RBP12.42□□□□□ -0.42
PHGDH-231ENST00000641939 FAM216AQ8WUB2 273 aa12.42□□□□□ -0.42
PHGDH-231ENST00000641939 PP6455Q8WZ26 134 aa12.42□□□□□ -0.42
PHGDH-231ENST00000641939 DMRTB1Q96MA1 342 aa12.42□□□□□ -0.42
PHGDH-231ENST00000641939 ZNF488Q96MN9 340 aa12.42□□□□□ -0.42
PHGDH-231ENST00000641939 TBX15Q96SF7 602 aa12.42□□□□□ -0.42
PHGDH-231ENST00000641939 CHST5Q9GZS9 411 aa12.42□□□□□ -0.42
PHGDH-231ENST00000641939 SIRPDQ9H106 197 aa12.42□□□□□ -0.42
PHGDH-231ENST00000641939 MRPS18AQ9NVS2 196 aaKnown RBP12.42□□□□□ -0.42
PHGDH-231ENST00000641939 SLC25A10Q9UBX3 287 aaPredicted RBP12.42□□□□□ -0.42
PHGDH-231ENST00000641939 ZNF222Q9UK12 451 aa12.42□□□□□ -0.42
PHGDH-231ENST00000641939 FAM230AA0A1W2PPH8 454 aa12.41□□□□□ -0.42
PHGDH-231ENST00000641939 WBP4O75554 376 aaKnown RBP12.41□□□□□ -0.42
PHGDH-231ENST00000641939 PEX2P28328 305 aa12.41□□□□□ -0.42
PHGDH-231ENST00000641939 CAV3P56539 151 aa12.41□□□□□ -0.42
PHGDH-231ENST00000641939 UBA52P62987 128 aaKnown RBP12.41□□□□□ -0.42
PHGDH-231ENST00000641939 IL24Q13007 206 aa12.41□□□□□ -0.42
PHGDH-231ENST00000641939 PDCD1Q15116 288 aa12.41□□□□□ -0.42
PHGDH-231ENST00000641939 BRD3OSQ6XYD6 125 aa12.41□□□□□ -0.42
PHGDH-231ENST00000641939 ANGPTL5Q86XS5 388 aa12.41□□□□□ -0.42
PHGDH-231ENST00000641939 CALHM1Q8IU99 346 aa12.41□□□□□ -0.42
PHGDH-231ENST00000641939 SYS1Q8N2H4 156 aa12.41□□□□□ -0.42
PHGDH-231ENST00000641939 OR52I1Q8NGK6 324 aa12.41□□□□□ -0.42
PHGDH-231ENST00000641939 NPRL2Q8WTW4 380 aa12.41□□□□□ -0.42
PHGDH-231ENST00000641939 CYGBQ8WWM9 190 aa12.41□□□□□ -0.42
PHGDH-231ENST00000641939 H1FXQ92522 213 aaKnown RBP12.41□□□□□ -0.42
PHGDH-231ENST00000641939 ZNF48Q96MX3 618 aaPredicted RBP12.41□□□□□ -0.42
PHGDH-231ENST00000641939 DCTN5Q9BTE1 182 aa12.41□□□□□ -0.42
PHGDH-231ENST00000641939 PKIBQ9C010 78 aa12.41□□□□□ -0.42
PHGDH-231ENST00000641939 ERVK13-1Q9NX77 482 aa12.41□□□□□ -0.42
PHGDH-231ENST00000641939 ONECUT1Q9UBC0 465 aa12.41□□□□□ -0.42
PHGDH-231ENST00000641939 KPTNQ9Y664 436 aa12.41□□□□□ -0.42
PHGDH-231ENST00000641939 CENPVL3A0A0U1RRI6 287 aa12.4□□□□□ -0.42
PHGDH-231ENST00000641939 ANKRD65E5RJM6 399 aa12.4□□□□□ -0.42
PHGDH-231ENST00000641939 NXPH2O95156 264 aa12.4□□□□□ -0.42
PHGDH-231ENST00000641939 NDUFB7P17568 137 aa12.4□□□□□ -0.42
PHGDH-231ENST00000641939 FUT6P51993 359 aa12.4□□□□□ -0.42
PHGDH-231ENST00000641939 ACTG1P63261 375 aa12.4□□□□□ -0.42
PHGDH-231ENST00000641939 BAMBIQ13145 260 aa12.4□□□□□ -0.42
PHGDH-231ENST00000641939 ALKBH1Q13686 389 aaKnown RBP12.4□□□□□ -0.42
PHGDH-231ENST00000641939 CNN3Q15417 329 aaKnown RBP12.4□□□□□ -0.42
PHGDH-231ENST00000641939 SMN1Q16637 294 aaKnown RBP12.4□□□□□ -0.42
PHGDH-231ENST00000641939 ZNF691Q5VV52 312 aa12.4□□□□□ -0.42
PHGDH-231ENST00000641939 TTC23Q5W5X9 447 aa12.4□□□□□ -0.42
PHGDH-231ENST00000641939 ZNRF1Q8ND25 227 aa12.4□□□□□ -0.42
PHGDH-231ENST00000641939 C8orf46Q8TAG6 207 aa12.4□□□□□ -0.42
PHGDH-231ENST00000641939 ADAT3Q96EY9 351 aaPredicted RBP12.4□□□□□ -0.42
PHGDH-231ENST00000641939 BORCS8Q96FH0 119 aa12.4□□□□□ -0.42
PHGDH-231ENST00000641939 SDSLQ96GA7 329 aa12.4□□□□□ -0.42
PHGDH-231ENST00000641939 NRIP2Q9BQI9 281 aa12.4□□□□□ -0.42
PHGDH-231ENST00000641939 ZNF649Q9BS31 505 aa12.4□□□□□ -0.42
PHGDH-231ENST00000641939 ISG20L2Q9H9L3 353 aaKnown RBP12.4□□□□□ -0.42
PHGDH-231ENST00000641939 HHLA2Q9UM44 414 aa12.4□□□□□ -0.42
PHGDH-231ENST00000641939 MAB21L2Q9Y586 359 aa12.4□□□□□ -0.42
PHGDH-231ENST00000641939 SOX21Q9Y651 276 aaPredicted RBP12.4□□□□□ -0.42
PHGDH-231ENST00000641939 DSCAML1Q8TD84 2053 aa12.39□□□□□ -0.43
PHGDH-231ENST00000641939 IGKV1-27A0A075B6S5 117 aa12.39□□□□□ -0.43
PHGDH-231ENST00000641939 DNAJC9-AS1A6NH13 148 aa12.39□□□□□ -0.43
PHGDH-231ENST00000641939 RFPL4AA6NLU0 287 aa12.39□□□□□ -0.43
PHGDH-231ENST00000641939 OR4C45A6NMZ5 311 aa12.39□□□□□ -0.43
PHGDH-231ENST00000641939 RFPL4AL1F8VTS6 287 aa12.39□□□□□ -0.43
PHGDH-231ENST00000641939 CLIC3O95833 236 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms