RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 XRCC2O43543 280 aa0.8□□□□□ -2.28
CCDC7-211ENST00000638889 CACNG3O60359 315 aa0.8□□□□□ -2.28
CCDC7-211ENST00000638889 IGKV1D-33P01593 117 aa0.8□□□□□ -2.28
CCDC7-211ENST00000638889 IGKV1-33P01594 117 aa0.8□□□□□ -2.28
CCDC7-211ENST00000638889 KRT16P08779 473 aa0.8□□□□□ -2.28
CCDC7-211ENST00000638889 HLA-GP17693 338 aa0.8□□□□□ -2.28
CCDC7-211ENST00000638889 SLC1A2P43004 574 aa0.8□□□□□ -2.28
CCDC7-211ENST00000638889 RPS15P62841 145 aaKnown RBP0.8□□□□□ -2.28
CCDC7-211ENST00000638889 MERTKQ12866 999 aa0.8□□□□□ -2.28
CCDC7-211ENST00000638889 CLEC18BQ6UXF7 455 aa0.8□□□□□ -2.28
CCDC7-211ENST00000638889 PQLC3Q8N755 202 aa0.8□□□□□ -2.28
CCDC7-211ENST00000638889 OR10D4PQ8NGN7 298 aa0.8□□□□□ -2.28
CCDC7-211ENST00000638889 OR5H2Q8NGV7 314 aa0.8□□□□□ -2.28
CCDC7-211ENST00000638889 OR8S1Q8NH09 359 aa0.8□□□□□ -2.28
CCDC7-211ENST00000638889 APOBEC3DQ96AK3 386 aaPredicted RBP0.8□□□□□ -2.28
CCDC7-211ENST00000638889 Q96MT0 163 aa0.8□□□□□ -2.28
CCDC7-211ENST00000638889 PLIN2Q99541 437 aa0.8□□□□□ -2.28
CCDC7-211ENST00000638889 TUBA4BQ9H853 241 aa0.8□□□□□ -2.28
CCDC7-211ENST00000638889 CCNB1IP1Q9NPC3 277 aa0.8□□□□□ -2.28
CCDC7-211ENST00000638889 MRPL16Q9NX20 251 aaKnown RBP0.8□□□□□ -2.28
CCDC7-211ENST00000638889 TMCC3Q9ULS5 477 aa0.8□□□□□ -2.28
CCDC7-211ENST00000638889 CHTOPQ9Y3Y2 248 aaKnown RBP0.8□□□□□ -2.28
CCDC7-211ENST00000638889 DYSFO75923 2080 aa0.8□□□□□ -2.28
CCDC7-211ENST00000638889 INSRP06213 1382 aa0.8□□□□□ -2.28
CCDC7-211ENST00000638889 A8MWP4 228 aa0.79□□□□□ -2.28
CCDC7-211ENST00000638889 C9JQL5 133 aa0.79□□□□□ -2.28
CCDC7-211ENST00000638889 TEX46H3BTG2 121 aa0.79□□□□□ -2.28
CCDC7-211ENST00000638889 ISLRO14498 428 aa0.79□□□□□ -2.28
CCDC7-211ENST00000638889 FFAR1O14842 300 aa0.79□□□□□ -2.28
CCDC7-211ENST00000638889 ZBTB5O15062 677 aa0.79□□□□□ -2.28
CCDC7-211ENST00000638889 S1PR2O95136 353 aa0.79□□□□□ -2.28
CCDC7-211ENST00000638889 CDK1P06493 297 aa0.79□□□□□ -2.28
CCDC7-211ENST00000638889 GFAPP14136 432 aa0.79□□□□□ -2.28
CCDC7-211ENST00000638889 MTPNP58546 118 aa0.79□□□□□ -2.28
CCDC7-211ENST00000638889 RAB11AP62491 216 aa0.79□□□□□ -2.28
CCDC7-211ENST00000638889 RPL18AQ02543 176 aaKnown RBP0.79□□□□□ -2.28
CCDC7-211ENST00000638889 ELOCQ15369 112 aa0.79□□□□□ -2.28
CCDC7-211ENST00000638889 RPEL1Q2QD12 228 aa0.79□□□□□ -2.28
CCDC7-211ENST00000638889 CYHR1Q6ZMK1 362 aa0.79□□□□□ -2.28
CCDC7-211ENST00000638889 Q6ZSA8 131 aa0.79□□□□□ -2.28
CCDC7-211ENST00000638889 NDUFAF7Q7L592 441 aa0.79□□□□□ -2.28
CCDC7-211ENST00000638889 LUZP2Q86TE4 346 aa0.79□□□□□ -2.28
CCDC7-211ENST00000638889 APRG1Q8IVJ8 170 aa0.79□□□□□ -2.28
CCDC7-211ENST00000638889 SLC7A5P1Q8MH63 180 aa0.79□□□□□ -2.28
CCDC7-211ENST00000638889 DAW1Q8N136 415 aa0.79□□□□□ -2.28
CCDC7-211ENST00000638889 ZNF555Q8NEP9 628 aa0.79□□□□□ -2.28
CCDC7-211ENST00000638889 MCUR1Q96AQ8 359 aa0.79□□□□□ -2.28
CCDC7-211ENST00000638889 ARV1Q9H2C2 271 aa0.79□□□□□ -2.28
CCDC7-211ENST00000638889 C20orf96Q9NUD7 363 aaPredicted RBP0.79□□□□□ -2.28
CCDC7-211ENST00000638889 GCNT4Q9P109 453 aa0.79□□□□□ -2.28
CCDC7-211ENST00000638889 OR51B2Q9Y5P1 312 aa0.79□□□□□ -2.28
CCDC7-211ENST00000638889 PLEKHG2Q9H7P9 1386 aa0.79□□□□□ -2.28
CCDC7-211ENST00000638889 TENM3Q9P273 2699 aa0.79□□□□□ -2.28
CCDC7-211ENST00000638889 KMT2EQ8IZD2 1858 aa0.78□□□□□ -2.28
CCDC7-211ENST00000638889 PLXNB3Q9ULL4 1909 aa0.78□□□□□ -2.28
CCDC7-211ENST00000638889 SMC2O95347 1197 aa0.78□□□□□ -2.28
CCDC7-211ENST00000638889 TTC4O95801 387 aa0.78□□□□□ -2.28
CCDC7-211ENST00000638889 SNRPAP09012 282 aaKnown RBP0.78□□□□□ -2.28
CCDC7-211ENST00000638889 SLC18A1P54219 525 aa0.78□□□□□ -2.28
CCDC7-211ENST00000638889 ITIH4Q14624 930 aa0.78□□□□□ -2.28
CCDC7-211ENST00000638889 GABRA6Q16445 453 aa0.78□□□□□ -2.28
CCDC7-211ENST00000638889 SSX9Q7RTT3 188 aa0.78□□□□□ -2.28
CCDC7-211ENST00000638889 PRNTQ86SH4 94 aa0.78□□□□□ -2.28
CCDC7-211ENST00000638889 MSRB3Q8IXL7 192 aa0.78□□□□□ -2.28
CCDC7-211ENST00000638889 ZFP82Q8N141 532 aa0.78□□□□□ -2.28
CCDC7-211ENST00000638889 OR8K1Q8NGG5 319 aa0.78□□□□□ -2.28
CCDC7-211ENST00000638889 OR8A1Q8NGG7 326 aa0.78□□□□□ -2.28
CCDC7-211ENST00000638889 OR10Z1Q8NGY1 313 aa0.78□□□□□ -2.28
CCDC7-211ENST00000638889 BAALCQ8WXS3 180 aa0.78□□□□□ -2.28
CCDC7-211ENST00000638889 JSRP1Q96MG2 331 aaPredicted RBP0.78□□□□□ -2.28
CCDC7-211ENST00000638889 CCDC77Q9BR77 488 aa0.78□□□□□ -2.28
CCDC7-211ENST00000638889 ZNF286AQ9HBT8 521 aa0.78□□□□□ -2.28
CCDC7-211ENST00000638889 CD209Q9NNX6 404 aa0.78□□□□□ -2.28
CCDC7-211ENST00000638889 MYEF2Q9P2K5 600 aaKnown RBP0.78□□□□□ -2.28
CCDC7-211ENST00000638889 HPCAL4Q9UM19 191 aa0.78□□□□□ -2.28
CCDC7-211ENST00000638889 ADGRB3O60242 1522 aa0.78□□□□□ -2.28
CCDC7-211ENST00000638889 DOCK6Q96HP0 2047 aa0.77□□□□□ -2.29
CCDC7-211ENST00000638889 IGKV1D-37A0A075B6S9 117 aa0.77□□□□□ -2.29
CCDC7-211ENST00000638889 IGHV3-21A0A0B4J1V1 117 aa0.77□□□□□ -2.29
CCDC7-211ENST00000638889 LEUTXA8MZ59 168 aa0.77□□□□□ -2.29
CCDC7-211ENST00000638889 K7ERS5 55 aa0.77□□□□□ -2.29
CCDC7-211ENST00000638889 MPDU1O75352 247 aa0.77□□□□□ -2.29
CCDC7-211ENST00000638889 AGTP01019 485 aa0.77□□□□□ -2.29
CCDC7-211ENST00000638889 CATP04040 527 aaKnown RBP0.77□□□□□ -2.29
CCDC7-211ENST00000638889 GZMAP12544 262 aa0.77□□□□□ -2.29
CCDC7-211ENST00000638889 HOXB8P17481 243 aaPredicted RBP0.77□□□□□ -2.29
CCDC7-211ENST00000638889 GSTM3P21266 225 aa0.77□□□□□ -2.29
CCDC7-211ENST00000638889 TAS2R39P59534 338 aa0.77□□□□□ -2.29
CCDC7-211ENST00000638889 SLC35A1P78382 337 aa0.77□□□□□ -2.29
CCDC7-211ENST00000638889 FOXF1Q12946 379 aa0.77□□□□□ -2.29
CCDC7-211ENST00000638889 C5orf64Q2M2E5 130 aa0.77□□□□□ -2.29
CCDC7-211ENST00000638889 SPANXN2Q5MJ10 180 aa0.77□□□□□ -2.29
CCDC7-211ENST00000638889 FAM231DQ6ZW35 169 aa0.77□□□□□ -2.29
CCDC7-211ENST00000638889 KIF2BQ8N4N8 673 aa0.77□□□□□ -2.29
CCDC7-211ENST00000638889 C8orf31Q8N9H6 132 aa0.77□□□□□ -2.29
CCDC7-211ENST00000638889 CYB561A3Q8NBI2 242 aa0.77□□□□□ -2.29
CCDC7-211ENST00000638889 TNFRSF14Q92956 283 aa0.77□□□□□ -2.29
CCDC7-211ENST00000638889 C9orf72Q96LT7 481 aa0.77□□□□□ -2.29
CCDC7-211ENST00000638889 TXNDC17Q9BRA2 123 aa0.77□□□□□ -2.29
CCDC7-211ENST00000638889 MRPL20Q9BYC9 149 aaKnown RBP0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms