RNA–Protein interactions for RNA: ENST00000637736.1

CACNA1A-246, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-246ENST00000637736 A0A1W2PR48 441 aa17.12■□□□□ 0.33
CACNA1A-246ENST00000637736 FCN1O00602 326 aa17.12■□□□□ 0.33
CACNA1A-246ENST00000637736 RPS19P39019 145 aaKnown RBP17.12■□□□□ 0.33
CACNA1A-246ENST00000637736 SLC16A12Q6ZSM3 486 aa17.12■□□□□ 0.33
CACNA1A-246ENST00000637736 TBC1D26Q86UD7 250 aa17.12■□□□□ 0.33
CACNA1A-246ENST00000637736 FAM26EQ8N5C1 309 aa17.12■□□□□ 0.33
CACNA1A-246ENST00000637736 SPPL3Q8TCT6 385 aa17.12■□□□□ 0.33
CACNA1A-246ENST00000637736 M0R2Z0 102 aa17.12■□□□□ 0.33
CACNA1A-246ENST00000637736 SUMO3P55854 103 aaPredicted RBP17.12■□□□□ 0.33
CACNA1A-246ENST00000637736 DMRTC1Q5HYR2 192 aa17.12■□□□□ 0.33
CACNA1A-246ENST00000637736 C20orf141Q9NUB4 165 aa17.12■□□□□ 0.33
CACNA1A-246ENST00000637736 POLR2IP36954 125 aaKnown RBP17.12■□□□□ 0.33
CACNA1A-246ENST00000637736 LYG2Q86SG7 212 aa17.12■□□□□ 0.33
CACNA1A-246ENST00000637736 TCTEX1D1Q8N7M0 179 aa17.11■□□□□ 0.33
CACNA1A-246ENST00000637736 OR4C16Q8NGL9 310 aa17.11■□□□□ 0.33
CACNA1A-246ENST00000637736 NUDCD2Q8WVJ2 157 aa17.11■□□□□ 0.33
CACNA1A-246ENST00000637736 ZIC5Q96T25 663 aa17.11■□□□□ 0.33
CACNA1A-246ENST00000637736 TAAR3PQ9P1P4 343 aa17.11■□□□□ 0.33
CACNA1A-246ENST00000637736 ZBTB42B2RXF5 422 aa17.11■□□□□ 0.33
CACNA1A-246ENST00000637736 SIAH2O43255 324 aa17.11■□□□□ 0.33
CACNA1A-246ENST00000637736 MRAP2Q96G30 205 aa17.11■□□□□ 0.33
CACNA1A-246ENST00000637736 LINC00052Q96N35 136 aa17.11■□□□□ 0.33
CACNA1A-246ENST00000637736 C6orf106Q9H6K1 298 aaPredicted RBP17.11■□□□□ 0.33
CACNA1A-246ENST00000637736 ARRB2P32121 409 aa17.11■□□□□ 0.33
CACNA1A-246ENST00000637736 NOXO1Q8NFA2 376 aa17.11■□□□□ 0.33
CACNA1A-246ENST00000637736 FCGR3BO75015 233 aa17.11■□□□□ 0.33
CACNA1A-246ENST00000637736 JUNBP17275 347 aaPredicted RBP17.11■□□□□ 0.33
CACNA1A-246ENST00000637736 HLXQ14774 488 aaPredicted RBP17.11■□□□□ 0.33
CACNA1A-246ENST00000637736 SSX1Q16384 188 aa17.11■□□□□ 0.33
CACNA1A-246ENST00000637736 ATP6V1FQ16864 119 aa17.11■□□□□ 0.33
CACNA1A-246ENST00000637736 MDH2P40926 338 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-246ENST00000637736 B2MP61769 119 aa17.11■□□□□ 0.33
CACNA1A-246ENST00000637736 SPINK9Q5DT21 86 aa17.11■□□□□ 0.33
CACNA1A-246ENST00000637736 Q6ZSR9 355 aa17.11■□□□□ 0.33
CACNA1A-246ENST00000637736 GLCCI1Q86VQ1 547 aa17.11■□□□□ 0.33
CACNA1A-246ENST00000637736 NKAIN4Q8IVV8 208 aa17.11■□□□□ 0.33
CACNA1A-246ENST00000637736 PCOLCE2Q9UKZ9 415 aa17.11■□□□□ 0.33
CACNA1A-246ENST00000637736 FANCMQ8IYD8 2048 aa17.11■□□□□ 0.33
CACNA1A-246ENST00000637736 DIO1P49895 249 aa17.11■□□□□ 0.33
CACNA1A-246ENST00000637736 COL11A1P12107 1806 aaPredicted RBP17.11■□□□□ 0.33
CACNA1A-246ENST00000637736 TRGV5A0A0B4J1U4 118 aa17.11■□□□□ 0.33
CACNA1A-246ENST00000637736 IFITM5A6NNB3 132 aa17.11■□□□□ 0.33
CACNA1A-246ENST00000637736 GCAP28676 217 aa17.11■□□□□ 0.33
CACNA1A-246ENST00000637736 ACER3Q9NUN7 267 aa17.11■□□□□ 0.33
CACNA1A-246ENST00000637736 PLXNA1Q9UIW2 1896 aa17.11■□□□□ 0.33
CACNA1A-246ENST00000637736 SLC2A10O95528 541 aa17.1■□□□□ 0.33
CACNA1A-246ENST00000637736 OR1N2Q8NGR9 330 aa17.1■□□□□ 0.33
CACNA1A-246ENST00000637736 MYOZ3Q8TDC0 251 aa17.1■□□□□ 0.33
CACNA1A-246ENST00000637736 KCNJ3P48549 501 aa17.1■□□□□ 0.33
CACNA1A-246ENST00000637736 GSG1Q2KHT4 349 aa17.1■□□□□ 0.33
CACNA1A-246ENST00000637736 RRN3P1Q2M238 152 aa17.1■□□□□ 0.33
CACNA1A-246ENST00000637736 SLC26A10Q8NG04 563 aa17.1■□□□□ 0.33
CACNA1A-246ENST00000637736 OR11G2Q8NGC1 345 aa17.1■□□□□ 0.33
CACNA1A-246ENST00000637736 OR2I1PQ8NGU4 316 aa17.1■□□□□ 0.33
CACNA1A-246ENST00000637736 OR4C12Q96R67 309 aa17.1■□□□□ 0.33
CACNA1A-246ENST00000637736 OR2J1Q9GZK6 312 aa17.1■□□□□ 0.33
CACNA1A-246ENST00000637736 AKIRIN1Q9H9L7 192 aaPredicted RBP17.1■□□□□ 0.33
CACNA1A-246ENST00000637736 SLC22A13Q9Y226 551 aa17.1■□□□□ 0.33
CACNA1A-246ENST00000637736 SLC6A12P48065 614 aa17.1■□□□□ 0.33
CACNA1A-246ENST00000637736 COL13A1Q5TAT6 717 aaPredicted RBP17.1■□□□□ 0.33
CACNA1A-246ENST00000637736 C16orf52Q8NHV5 167 aa17.1■□□□□ 0.33
CACNA1A-246ENST00000637736 FAM186AA6NE01 2351 aa17.1■□□□□ 0.33
CACNA1A-246ENST00000637736 LAMB2P55268 1798 aa17.1■□□□□ 0.33
CACNA1A-246ENST00000637736 MELTFP08582 738 aa17.1■□□□□ 0.33
CACNA1A-246ENST00000637736 CEACAM3P40198 252 aa17.1■□□□□ 0.33
CACNA1A-246ENST00000637736 UBTD1Q9HAC8 227 aa17.1■□□□□ 0.33
CACNA1A-246ENST00000637736 ALS2Q96Q42 1657 aa17.1■□□□□ 0.33
CACNA1A-246ENST00000637736 RNFT1Q5M7Z0 435 aa17.1■□□□□ 0.33
CACNA1A-246ENST00000637736 MARCH5Q9NX47 278 aa17.1■□□□□ 0.33
CACNA1A-246ENST00000637736 ZNF256Q9Y2P7 627 aaPredicted RBP17.1■□□□□ 0.33
CACNA1A-246ENST00000637736 A0A1B0GUH1 482 aa17.1■□□□□ 0.33
CACNA1A-246ENST00000637736 CDAP32320 146 aa17.1■□□□□ 0.33
CACNA1A-246ENST00000637736 OR2V1Q8NHB1 315 aa17.1■□□□□ 0.33
CACNA1A-246ENST00000637736 MOGAT1Q96PD6 335 aa17.1■□□□□ 0.33
CACNA1A-246ENST00000637736 OR1C1Q15619 314 aa17.1■□□□□ 0.33
CACNA1A-246ENST00000637736 ZNF683Q8IZ20 524 aa17.1■□□□□ 0.33
CACNA1A-246ENST00000637736 GABARAPL3Q9BY60 117 aa17.1■□□□□ 0.33
CACNA1A-246ENST00000637736 GSX2Q9BZM3 304 aa17.1■□□□□ 0.33
CACNA1A-246ENST00000637736 HCSTQ9UBK5 93 aa17.1■□□□□ 0.33
CACNA1A-246ENST00000637736 TMEM179BQ7Z7N9 219 aa17.09■□□□□ 0.33
CACNA1A-246ENST00000637736 PPP1R1CQ8WVI7 109 aa17.09■□□□□ 0.33
CACNA1A-246ENST00000637736 RASL11BQ9BPW5 248 aa17.09■□□□□ 0.33
CACNA1A-246ENST00000637736 TMEM140Q9NV12 185 aa17.09■□□□□ 0.33
CACNA1A-246ENST00000637736 OR4C46A6NHA9 309 aa17.09■□□□□ 0.33
CACNA1A-246ENST00000637736 TMEM211Q6ICI0 200 aa17.09■□□□□ 0.33
CACNA1A-246ENST00000637736 AKR7LQ8NHP1 331 aa17.09■□□□□ 0.33
CACNA1A-246ENST00000637736 HGDQ93099 445 aa17.09■□□□□ 0.33
CACNA1A-246ENST00000637736 SHISA4Q96DD7 197 aa17.09■□□□□ 0.33
CACNA1A-246ENST00000637736 C19orf43Q9BQ61 176 aa17.09■□□□□ 0.33
CACNA1A-246ENST00000637736 MED29Q9NX70 200 aa17.09■□□□□ 0.33
CACNA1A-246ENST00000637736 DGCR2P98153 550 aa17.09■□□□□ 0.33
CACNA1A-246ENST00000637736 C19orf57Q0VDD7 668 aa17.09■□□□□ 0.33
CACNA1A-246ENST00000637736 LRP11Q86VZ4 500 aa17.09■□□□□ 0.33
CACNA1A-246ENST00000637736 KCNK15Q9H427 330 aa17.09■□□□□ 0.33
CACNA1A-246ENST00000637736 DOCK9Q9BZ29 2069 aa17.09■□□□□ 0.33
CACNA1A-246ENST00000637736 CDX4O14627 284 aaPredicted RBP17.09■□□□□ 0.33
CACNA1A-246ENST00000637736 CSN3P07498 182 aa17.09■□□□□ 0.33
CACNA1A-246ENST00000637736 WFDC3Q8IUB2 231 aa17.09■□□□□ 0.33
CACNA1A-246ENST00000637736 SYS1Q8N2H4 156 aa17.09■□□□□ 0.33
CACNA1A-246ENST00000637736 MUC15Q8N387 334 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms