RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 ANKRA2Q9H9E1 313 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 FOLH1BQ9HBA9 442 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 FANCFQ9NPI8 374 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 NUDT15Q9NV35 164 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 CLEC5AQ9NY25 188 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 ZNF226Q9NYT6 803 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 TAS2R7Q9NYW3 318 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 DHRS4-AS1Q9P1J3 65 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 ARMCX1Q9P291 453 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 OPTCQ9UBM4 332 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 PIGLQ9Y2B2 252 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 RNF11Q9Y3C5 154 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 AK6Q9Y3D8 172 aaKnown RBP1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 TIMM10BQ9Y5J6 103 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 TANC2Q9HCD6 1990 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 TRAV9-2A0A087WT02 112 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 A0A0J9YW62 118 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 A0A1W2PQD3 144 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 GOLGA6L10A6NI86 522 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 CCT8L1PA6NM43 557 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 SYCE1LA8MT33 242 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 A8MT66 165 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 SUPT3HB4E1H0 165 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 E9PLD3 99 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 H7C417 338 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 UPK1AO00322 258 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 RAD51CO43502 376 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 ZNF253O75346 499 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 SUPT3HO75486 399 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 RHBDL1O75783 438 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 TRAPPC6AO75865 159 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 KLHL2O95198 593 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 SERPINA3P01011 423 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 PDYNP01213 254 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 C2P06681 752 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 KLK1P06870 262 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 ALOX5P09917 674 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 NCK1P16333 377 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 TCP1P17987 556 aaKnown RBP1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 CSNK2A2P19784 350 aaPredicted RBP1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 NCF2P19878 526 aaPredicted RBP1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 IGHV1-2P23083 117 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 ELK4P28324 431 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 GCAP28676 217 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 SHC1P29353 583 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 CRABP2P29373 138 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 RPL13AP40429 203 aaKnown RBP1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 XKP51811 444 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 RAP1GDS1P52306 607 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 ATP5J2P56134 94 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 SEC61GP60059 68 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 RPL32P62910 135 aaKnown RBP1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 MRPS11P82912 194 aaKnown RBP1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 DR1Q01658 176 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 PAX2Q02962 417 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 LOXL1Q08397 574 aaPredicted RBP1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 ZNF763Q0D2J5 394 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 PDIA2Q13087 525 aaKnown RBP1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 KIAA0040Q15053 153 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 PON3Q15166 354 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 PPP1R7Q15435 360 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 SSX2Q16385 188 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 CLEC12BQ2HXU8 276 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 TMEM249Q2WGJ8 235 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 C6orf226Q5I0X4 101 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 PDZK1Q5T2W1 519 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 METTL11BQ5VVY1 283 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 AP1ARQ63HQ0 302 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 FAM71E1Q6IPT2 247 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 UFSP1Q6NVU6 142 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 METAP1DQ6UB28 335 aaPredicted RBP1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 RNF165Q6ZSG1 346 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 Q6ZT83 130 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 RPS27LQ71UM5 84 aaKnown RBP1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 ALPK2Q86TB3 2170 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 SLC25A42Q86VD7 318 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 UBE2J2Q8N2K1 259 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 CNEP1R1Q8N9A8 125 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 OR4F6Q8NGB9 312 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 OR4K14Q8NGD5 310 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 OR9K2Q8NGE7 335 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 OR51G2Q8NGK0 314 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 OR9A2Q8NGT5 310 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 OR10D3Q8NH80 312 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 AKR7LQ8NHP1 331 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 FAM110BQ8TC76 370 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 TMEM158Q8WZ71 300 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 S100PBPQ96BU1 408 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 TM4SF18Q96CE8 201 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 JSRP1Q96MG2 331 aaPredicted RBP1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 ZNF382Q96SR6 550 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 SERPINI1Q99574 410 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 MCHR1Q99705 422 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 SRXN1Q9BYN0 137 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 POTEKPQ9BYX7 375 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 REG4Q9BYZ8 158 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 ACTR6Q9GZN1 396 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 STMN4Q9H169 189 aaPredicted RBP1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 ZNF385DQ9H6B1 395 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 EXO5Q9H790 373 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms