RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 MED13Q9UHV7 2174 aa10.15□□□□□ -0.78
LINC00538-201ENST00000626109 FRYQ5TBA9 3013 aa10.15□□□□□ -0.78
LINC00538-201ENST00000626109 MEIKINA0A087WXM9 373 aa10.15□□□□□ -0.79
LINC00538-201ENST00000626109 A0A1W2PQD3 144 aa10.15□□□□□ -0.79
LINC00538-201ENST00000626109 OR6C68A6NDL8 312 aa10.15□□□□□ -0.79
LINC00538-201ENST00000626109 FADS1O60427 444 aa10.15□□□□□ -0.79
LINC00538-201ENST00000626109 KRT33AO76009 404 aa10.15□□□□□ -0.79
LINC00538-201ENST00000626109 NEURL1O76050 574 aa10.15□□□□□ -0.79
LINC00538-201ENST00000626109 CD14P08571 375 aa10.15□□□□□ -0.79
LINC00538-201ENST00000626109 CFHR2P36980 270 aa10.15□□□□□ -0.79
LINC00538-201ENST00000626109 OR3A3P47888 321 aa10.15□□□□□ -0.79
LINC00538-201ENST00000626109 EGR4Q05215 589 aa10.15□□□□□ -0.79
LINC00538-201ENST00000626109 MICBQ29980 383 aa10.15□□□□□ -0.79
LINC00538-201ENST00000626109 TMEM249Q2WGJ8 235 aa10.15□□□□□ -0.79
LINC00538-201ENST00000626109 RNASE12Q5GAN4 147 aaKnown RBP10.15□□□□□ -0.79
LINC00538-201ENST00000626109 ELFN2Q5R3F8 820 aa10.15□□□□□ -0.79
LINC00538-201ENST00000626109 LEG1Q6P5S2 330 aa10.15□□□□□ -0.79
LINC00538-201ENST00000626109 CBLN3Q6UW01 205 aa10.15□□□□□ -0.79
LINC00538-201ENST00000626109 IGFL3Q6UXB1 125 aa10.15□□□□□ -0.79
LINC00538-201ENST00000626109 LRRN1Q6UXK5 716 aa10.15□□□□□ -0.79
LINC00538-201ENST00000626109 MDGA2Q7Z553 956 aa10.15□□□□□ -0.79
LINC00538-201ENST00000626109 ZNF100Q8IYN0 542 aa10.15□□□□□ -0.79
LINC00538-201ENST00000626109 OR6V1Q8N148 313 aa10.15□□□□□ -0.79
LINC00538-201ENST00000626109 MDS2Q8NDY4 140 aa10.15□□□□□ -0.79
LINC00538-201ENST00000626109 RNASE11Q8TAA1 199 aaKnown RBP10.15□□□□□ -0.79
LINC00538-201ENST00000626109 PHOSPHO1Q8TCT1 267 aa10.15□□□□□ -0.79
LINC00538-201ENST00000626109 RPS4Y2Q8TD47 263 aa10.15□□□□□ -0.79
LINC00538-201ENST00000626109 ZNF251Q9BRH9 671 aa10.15□□□□□ -0.79
LINC00538-201ENST00000626109 FOXJ3Q9UPW0 622 aa10.15□□□□□ -0.79
LINC00538-201ENST00000626109 ETV7Q9Y603 341 aa10.15□□□□□ -0.79
LINC00538-201ENST00000626109 TRAV17A0A0B4J275 112 aa10.14□□□□□ -0.79
LINC00538-201ENST00000626109 HSPB2A8KAH6 182 aa10.14□□□□□ -0.79
LINC00538-201ENST00000626109 BLOC1S5-TXNDC5H3BN57 136 aa10.14□□□□□ -0.79
LINC00538-201ENST00000626109 PHYHO14832 338 aa10.14□□□□□ -0.79
LINC00538-201ENST00000626109 TCAPO15273 167 aa10.14□□□□□ -0.79
LINC00538-201ENST00000626109 MAGEB4O15481 346 aaPredicted RBP10.14□□□□□ -0.79
LINC00538-201ENST00000626109 KHDRBS3O75525 346 aaKnown RBP10.14□□□□□ -0.79
LINC00538-201ENST00000626109 IFNA7P01567 189 aa10.14□□□□□ -0.79
LINC00538-201ENST00000626109 MT-ND4P03905 459 aa10.14□□□□□ -0.79
LINC00538-201ENST00000626109 HIST1H2ABP04908 130 aa10.14□□□□□ -0.79
LINC00538-201ENST00000626109 SULT1A3P0DMM9 295 aa10.14□□□□□ -0.79
LINC00538-201ENST00000626109 SULT1A4P0DMN0 295 aa10.14□□□□□ -0.79
LINC00538-201ENST00000626109 PSMB1P20618 241 aaKnown RBP10.14□□□□□ -0.79
LINC00538-201ENST00000626109 TNFSF10P50591 281 aa10.14□□□□□ -0.79
LINC00538-201ENST00000626109 PPT1P50897 306 aa10.14□□□□□ -0.79
LINC00538-201ENST00000626109 CCR6P51684 374 aa10.14□□□□□ -0.79
LINC00538-201ENST00000626109 GK2Q14410 553 aaPredicted RBP10.14□□□□□ -0.79
LINC00538-201ENST00000626109 HSPB2Q16082 182 aa10.14□□□□□ -0.79
LINC00538-201ENST00000626109 GUK1Q16774 197 aa10.14□□□□□ -0.79
LINC00538-201ENST00000626109 LINC00303Q3SY05 128 aa10.14□□□□□ -0.79
LINC00538-201ENST00000626109 Q499Y3 187 aa10.14□□□□□ -0.79
LINC00538-201ENST00000626109 ESCO2Q56NI9 601 aa10.14□□□□□ -0.79
LINC00538-201ENST00000626109 TEX261Q6UWH6 196 aa10.14□□□□□ -0.79
LINC00538-201ENST00000626109 HIST3H2AQ7L7L0 130 aa10.14□□□□□ -0.79
LINC00538-201ENST00000626109 MARCH3Q86UD3 253 aa10.14□□□□□ -0.79
LINC00538-201ENST00000626109 FAM109AQ8N4B1 249 aa10.14□□□□□ -0.79
LINC00538-201ENST00000626109 RFLNBQ8N5W9 214 aa10.14□□□□□ -0.79
LINC00538-201ENST00000626109 ZNF433Q8N7K0 673 aaPredicted RBP10.14□□□□□ -0.79
LINC00538-201ENST00000626109 TMEM178AQ8NBL3 297 aa10.14□□□□□ -0.79
LINC00538-201ENST00000626109 OR5AK2Q8NH90 309 aa10.14□□□□□ -0.79
LINC00538-201ENST00000626109 RNF138Q8WVD3 245 aa10.14□□□□□ -0.79
LINC00538-201ENST00000626109 HIST1H2ACQ93077 130 aa10.14□□□□□ -0.79
LINC00538-201ENST00000626109 DERL3Q96Q80 235 aa10.14□□□□□ -0.79
LINC00538-201ENST00000626109 C20orf85Q9H1P6 137 aa10.14□□□□□ -0.79
LINC00538-201ENST00000626109 ZFP64Q9NPA5 681 aa10.14□□□□□ -0.79
LINC00538-201ENST00000626109 EXOSC3Q9NQT5 275 aaKnown RBP10.14□□□□□ -0.79
LINC00538-201ENST00000626109 ZC4H2Q9NQZ6 224 aa10.14□□□□□ -0.79
LINC00538-201ENST00000626109 SLC23A1Q9UHI7 598 aa10.14□□□□□ -0.79
LINC00538-201ENST00000626109 COPS3Q9UNS2 423 aa10.14□□□□□ -0.79
LINC00538-201ENST00000626109 KLF13Q9Y2Y9 288 aaPredicted RBP10.14□□□□□ -0.79
LINC00538-201ENST00000626109 TMEM14AQ9Y6G1 99 aa10.14□□□□□ -0.79
LINC00538-201ENST00000626109 U3KQ87 197 aa10.14□□□□□ -0.79
LINC00538-201ENST00000626109 PRSS37A4D1T9 235 aa10.13□□□□□ -0.79
LINC00538-201ENST00000626109 A6NNC1 897 aa10.13□□□□□ -0.79
LINC00538-201ENST00000626109 RENP00797 406 aa10.13□□□□□ -0.79
LINC00538-201ENST00000626109 CST4P01036 141 aa10.13□□□□□ -0.79
LINC00538-201ENST00000626109 RAF1P04049 648 aa10.13□□□□□ -0.79
LINC00538-201ENST00000626109 SP1P08047 785 aa10.13□□□□□ -0.79
LINC00538-201ENST00000626109 FAM87AP0C7U9 286 aa10.13□□□□□ -0.79
LINC00538-201ENST00000626109 UBCP0CG48 685 aaKnown RBP10.13□□□□□ -0.79
LINC00538-201ENST00000626109 ART1P52961 327 aa10.13□□□□□ -0.79
LINC00538-201ENST00000626109 CTXN1P60606 82 aa10.13□□□□□ -0.79
LINC00538-201ENST00000626109 DHODHQ02127 395 aa10.13□□□□□ -0.79
LINC00538-201ENST00000626109 EGR3Q06889 387 aa10.13□□□□□ -0.79
LINC00538-201ENST00000626109 ALG10Q5BKT4 473 aa10.13□□□□□ -0.79
LINC00538-201ENST00000626109 APOOLQ6UXV4 268 aa10.13□□□□□ -0.79
LINC00538-201ENST00000626109 ZNF562Q6V9R5 426 aa10.13□□□□□ -0.79
LINC00538-201ENST00000626109 C3P1Q6ZMU1 363 aa10.13□□□□□ -0.79
LINC00538-201ENST00000626109 FCRLAQ7L513 359 aa10.13□□□□□ -0.79
LINC00538-201ENST00000626109 PRSS45Q7RTY3 260 aa10.13□□□□□ -0.79
LINC00538-201ENST00000626109 GABRG1Q8N1C3 465 aa10.13□□□□□ -0.79
LINC00538-201ENST00000626109 EXPH5Q8NEV8 1989 aa10.13□□□□□ -0.79
LINC00538-201ENST00000626109 OR2T4Q8NH00 348 aa10.13□□□□□ -0.79
LINC00538-201ENST00000626109 CPNE4Q96A23 557 aaPredicted RBP10.13□□□□□ -0.79
LINC00538-201ENST00000626109 COMMD4Q9H0A8 199 aa10.13□□□□□ -0.79
LINC00538-201ENST00000626109 C1orf198Q9H425 327 aa10.13□□□□□ -0.79
LINC00538-201ENST00000626109 ELOVL3Q9HB03 270 aa10.13□□□□□ -0.79
LINC00538-201ENST00000626109 HRASLSQ9HDD0 168 aa10.13□□□□□ -0.79
LINC00538-201ENST00000626109 MYOZ1Q9NP98 299 aaPredicted RBP10.13□□□□□ -0.79
LINC00538-201ENST00000626109 PPP4R1LQ9P1A2 415 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms