RNA–Protein interactions for RNA: ENST00000625243.1

CHD2-203, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-203ENST00000625243 COA1Q9GZY4 146 aa1.38□□□□□ -2.19
CHD2-203ENST00000625243 SYT4Q9H2B2 425 aa1.38□□□□□ -2.19
CHD2-203ENST00000625243 OR51B5Q9H339 312 aa1.38□□□□□ -2.19
CHD2-203ENST00000625243 INIPQ9NRY2 104 aa1.38□□□□□ -2.19
CHD2-203ENST00000625243 TMEM100Q9NV29 134 aa1.38□□□□□ -2.19
CHD2-203ENST00000625243 RBM22Q9NW64 420 aaKnown RBP eCLIP1.38□□□□□ -2.19
CHD2-203ENST00000625243 VAPAQ9P0L0 249 aa1.38□□□□□ -2.19
CHD2-203ENST00000625243 PRO0628Q9UI54 55 aa1.38□□□□□ -2.19
CHD2-203ENST00000625243 AP3M1Q9Y2T2 418 aa1.38□□□□□ -2.19
CHD2-203ENST00000625243 YEATS2Q9ULM3 1422 aa1.38□□□□□ -2.19
CHD2-203ENST00000625243 NACAE9PAV3 2078 aa1.38□□□□□ -2.19
CHD2-203ENST00000625243 SNAPC4Q5SXM2 1469 aa1.37□□□□□ -2.19
CHD2-203ENST00000625243 LOC102724200A0A096LPH7 203 aaPredicted RBP1.37□□□□□ -2.19
CHD2-203ENST00000625243 FAM240AA0A1B0GVK7 77 aa1.37□□□□□ -2.19
CHD2-203ENST00000625243 TMEM72A0PK05 275 aa1.37□□□□□ -2.19
CHD2-203ENST00000625243 GOLGA6L4A6NEF3 574 aa1.37□□□□□ -2.19
CHD2-203ENST00000625243 A8MUU9 505 aa1.37□□□□□ -2.19
CHD2-203ENST00000625243 RFXANKO14593 260 aa1.37□□□□□ -2.19
CHD2-203ENST00000625243 RGS5O15539 181 aa1.37□□□□□ -2.19
CHD2-203ENST00000625243 CSTAP01040 98 aa1.37□□□□□ -2.19
CHD2-203ENST00000625243 SNRPAP09012 282 aaKnown RBP1.37□□□□□ -2.19
CHD2-203ENST00000625243 CELP19835 753 aa1.37□□□□□ -2.19
CHD2-203ENST00000625243 CCNOP22674 350 aa1.37□□□□□ -2.19
CHD2-203ENST00000625243 GNRHRP30968 328 aa1.37□□□□□ -2.19
CHD2-203ENST00000625243 DNASE1L1P49184 302 aa1.37□□□□□ -2.19
CHD2-203ENST00000625243 GDI2P50395 445 aaKnown RBP1.37□□□□□ -2.19
CHD2-203ENST00000625243 GRB2P62993 217 aaKnown RBP1.37□□□□□ -2.19
CHD2-203ENST00000625243 TOMM34Q15785 309 aaPredicted RBP1.37□□□□□ -2.19
CHD2-203ENST00000625243 KRTAP13-2Q52LG2 175 aa1.37□□□□□ -2.19
CHD2-203ENST00000625243 CAVIN4Q5BKX8 364 aa1.37□□□□□ -2.19
CHD2-203ENST00000625243 IDNKQ5T6J7 187 aa1.37□□□□□ -2.19
CHD2-203ENST00000625243 TRMT10CQ7L0Y3 403 aaKnown RBP1.37□□□□□ -2.19
CHD2-203ENST00000625243 PDPNQ86YL7 162 aa1.37□□□□□ -2.19
CHD2-203ENST00000625243 BBS7Q8IWZ6 715 aa1.37□□□□□ -2.19
CHD2-203ENST00000625243 ZNF101Q8IZC7 436 aa1.37□□□□□ -2.19
CHD2-203ENST00000625243 TRIML2Q8N7C3 387 aa1.37□□□□□ -2.19
CHD2-203ENST00000625243 NDNFQ8TB73 568 aa1.37□□□□□ -2.19
CHD2-203ENST00000625243 LRRC20Q8TCA0 184 aa1.37□□□□□ -2.19
CHD2-203ENST00000625243 NT5CQ8TCD5 201 aa1.37□□□□□ -2.19
CHD2-203ENST00000625243 KLF14Q8TD94 323 aaPredicted RBP1.37□□□□□ -2.19
CHD2-203ENST00000625243 YIPF5Q969M3 257 aa1.37□□□□□ -2.19
CHD2-203ENST00000625243 TOP1MTQ969P6 601 aa1.37□□□□□ -2.19
CHD2-203ENST00000625243 FAM19A4Q96LR4 140 aa1.37□□□□□ -2.19
CHD2-203ENST00000625243 METTL26Q96S19 204 aa1.37□□□□□ -2.19
CHD2-203ENST00000625243 VAT1Q99536 393 aa1.37□□□□□ -2.19
CHD2-203ENST00000625243 COPS4Q9BT78 406 aa1.37□□□□□ -2.19
CHD2-203ENST00000625243 ANKHQ9HCJ1 492 aa1.37□□□□□ -2.19
CHD2-203ENST00000625243 ABCB9Q9NP78 766 aa1.37□□□□□ -2.19
CHD2-203ENST00000625243 PARP11Q9NR21 331 aa1.37□□□□□ -2.19
CHD2-203ENST00000625243 SDHAF2Q9NX18 166 aa1.37□□□□□ -2.19
CHD2-203ENST00000625243 VAX2Q9UIW0 290 aa1.37□□□□□ -2.19
CHD2-203ENST00000625243 RWDD2AQ9UIY3 292 aa1.37□□□□□ -2.19
CHD2-203ENST00000625243 TFR2Q9UP52 801 aa1.37□□□□□ -2.19
CHD2-203ENST00000625243 STK38LQ9Y2H1 464 aa1.37□□□□□ -2.19
CHD2-203ENST00000625243 ACOT9Q9Y305 439 aa1.37□□□□□ -2.19
CHD2-203ENST00000625243 PPIL1Q9Y3C6 166 aa1.37□□□□□ -2.19
CHD2-203ENST00000625243 KLF12Q9Y4X4 402 aa1.37□□□□□ -2.19
CHD2-203ENST00000625243 ORC6Q9Y5N6 252 aa1.37□□□□□ -2.19
CHD2-203ENST00000625243 SETD1AO15047 1707 aaKnown RBP1.37□□□□□ -2.19
CHD2-203ENST00000625243 IGHV3OR16-8A0A075B7F1 116 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 IGHV6-1A0A0B4J1U7 121 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 CCL15-CCL14A0A0B4J2E2 113 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 RAB19A4D1S5 217 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 ZNF593O00488 134 aaPredicted RBP1.36□□□□□ -2.19
CHD2-203ENST00000625243 UPK2O00526 184 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 PRMT5O14744 637 aaPredicted RBP1.36□□□□□ -2.19
CHD2-203ENST00000625243 ALOX12BO75342 701 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 NRASP01111 189 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 HRASP01112 189 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 KRASP01116 189 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 CDK1P06493 297 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 S100A9P06702 114 aaKnown RBP1.36□□□□□ -2.19
CHD2-203ENST00000625243 PFN1P07737 140 aaKnown RBP1.36□□□□□ -2.19
CHD2-203ENST00000625243 TPM1P09493 284 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 MLNP12872 115 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 GPR4P46093 362 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 CMC4P56277 68 aaPredicted RBP1.36□□□□□ -2.19
CHD2-203ENST00000625243 MLF1P58340 268 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 RPS11P62280 158 aaKnown RBP eCLIP1.36□□□□□ -2.19
CHD2-203ENST00000625243 RPL10AP62906 217 aaKnown RBP1.36□□□□□ -2.19
CHD2-203ENST00000625243 IL5RAQ01344 420 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 TAL2Q16559 108 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 CCL15Q16663 113 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 TTMPQ5BVD1 217 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 MRPL2Q5T653 305 aaKnown RBP1.36□□□□□ -2.19
CHD2-203ENST00000625243 C6orf183Q5T699 404 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 KDM4DQ6B0I6 523 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 SLC25A25Q6KCM7 469 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 FAM231DQ6ZW35 169 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 DENND4AQ7Z401 1863 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 ITPRIPQ8IWB1 547 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 NELFCDQ8IXH7 590 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 CYP4Z2PQ8N1L4 340 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 OR2M7Q8NG81 312 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 OR8A1Q8NGG7 326 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 OR1P1Q8NH06 330 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 ZNF420Q8TAQ5 688 aaPredicted RBP1.36□□□□□ -2.19
CHD2-203ENST00000625243 DOK4Q8TEW6 326 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 CDKL2Q92772 493 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 S100PBPQ96BU1 408 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms