RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 PP6455Q8WZ26 134 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 SLC39A13Q96H72 371 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 TXNL4BQ9NX01 149 aaKnown RBP5.63□□□□□ -1.51
CDKL5-205ENST00000623535 CORTO00230 105 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 DHRS3O75911 302 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 OLIG2Q13516 323 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 PLK5Q496M5 336 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 TTC9BQ8N6N2 239 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 MCRIP2Q9BUT9 160 aaKnown RBP5.63□□□□□ -1.51
CDKL5-205ENST00000623535 A0A1W2PNR3 127 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 B9A039 149 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 KLKB1P03952 638 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 TMEM268Q5VZI3 342 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 RELL2Q8NC24 303 aaPredicted RBP5.63□□□□□ -1.51
CDKL5-205ENST00000623535 OR4Q3Q8NH05 313 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 TBC1D29Q9UFV1 150 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 SCN3AQ9NY46 2000 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 CNOT1A5YKK6 2376 aaKnown RBP5.63□□□□□ -1.51
CDKL5-205ENST00000623535 GPANK1O95872 356 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 BSGP35613 385 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 SPANXN1Q5VSR9 72 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 NALCNQ8IZF0 1738 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 TMEM210A6NLX4 147 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 PTGESO14684 152 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 NGFP01138 241 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 GAPDHP04406 335 aaKnown RBP5.63□□□□□ -1.51
CDKL5-205ENST00000623535 ZNF770Q6IQ21 691 aaPredicted RBP5.63□□□□□ -1.51
CDKL5-205ENST00000623535 FAM166AQ6J272 317 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 OSR2Q8N2R0 312 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 OR10V1Q8NGI7 309 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 SLC25A33Q9BSK2 321 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 HSD3B7Q9H2F3 369 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 ZNF586Q9NXT0 402 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 NPFFO15130 113 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 ZNF324O75467 553 aaPredicted RBP5.63□□□□□ -1.51
CDKL5-205ENST00000623535 CLDN14O95500 239 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 CGB7P0DN87 165 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 GABRB3P28472 473 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 MAGEB1P43366 347 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 RPS25P62851 125 aaKnown RBP5.63□□□□□ -1.51
CDKL5-205ENST00000623535 SLC25A11Q02978 314 aaKnown RBP5.63□□□□□ -1.51
CDKL5-205ENST00000623535 SLC25A26Q70HW3 274 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 TAS1R1Q7RTX1 841 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 BLNKQ8WV28 456 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 FLVCR1Q9Y5Y0 555 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 HEATR5BQ9P2D3 2071 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 CADP27708 2225 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 ZNF407Q9C0G0 2248 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 FCGR3BO75015 233 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 B3GALT4O96024 378 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 DAOP14920 347 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 CXorf67Q86X51 503 aaPredicted RBP5.63□□□□□ -1.51
CDKL5-205ENST00000623535 SPSB1Q96BD6 273 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 CHST6Q9GZX3 395 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 EXOSC3Q9NQT5 275 aaKnown RBP5.63□□□□□ -1.51
CDKL5-205ENST00000623535 COA3Q9Y2R0 106 aaPredicted RBP5.63□□□□□ -1.51
CDKL5-205ENST00000623535 USP54Q70EL1 1684 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 LINC01565O15544 149 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 SULT1A3P0DMM9 295 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 SULT1A4P0DMN0 295 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 FGF7P21781 194 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 TMEM183AQ8IXX5 376 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 TMEM131LA2VDJ0 1609 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 MDC1Q14676 2089 aaKnown RBP5.63□□□□□ -1.51
CDKL5-205ENST00000623535 IGHV3-64DA0A0J9YX35 117 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 TMEM218A2RU14 115 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 ZNF727A8MUV8 499 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 DEDDO75618 318 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 SP9P0CG40 484 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 NXPH1P58417 271 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 PRSS8Q16651 343 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 ISXQ2M1V0 245 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 ANGPTL5Q86XS5 388 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 LINC00469Q8N7U9 141 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 SIGLECL1Q8N7X8 197 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 NAT8LQ8N9F0 302 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 PHLDA1Q8WV24 401 aaPredicted RBP5.63□□□□□ -1.51
CDKL5-205ENST00000623535 FGF14Q92915 247 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 MACROD1Q9BQ69 325 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 MAP1LC3CQ9BXW4 147 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 SMOC1Q9H4F8 434 aa5.63□□□□□ -1.51
CDKL5-205ENST00000623535 TRAV9-2A0A087WT02 112 aa5.62□□□□□ -1.51
CDKL5-205ENST00000623535 OOEPA6NGQ2 149 aa5.62□□□□□ -1.51
CDKL5-205ENST00000623535 ZBTB42B2RXF5 422 aa5.62□□□□□ -1.51
CDKL5-205ENST00000623535 TGFBR1P36897 503 aa5.62□□□□□ -1.51
CDKL5-205ENST00000623535 ERVFC1-1P60608 527 aa5.62□□□□□ -1.51
CDKL5-205ENST00000623535 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.62□□□□□ -1.51
CDKL5-205ENST00000623535 OR10D3Q8NH80 312 aa5.62□□□□□ -1.51
CDKL5-205ENST00000623535 ISL2Q96A47 359 aa5.62□□□□□ -1.51
CDKL5-205ENST00000623535 PRSS22Q9GZN4 317 aa5.62□□□□□ -1.51
CDKL5-205ENST00000623535 NMNAT1Q9HAN9 279 aaPredicted RBP5.62□□□□□ -1.51
CDKL5-205ENST00000623535 CSNK1G1Q9HCP0 422 aa5.62□□□□□ -1.51
CDKL5-205ENST00000623535 NRIP3Q9NQ35 241 aa5.62□□□□□ -1.51
CDKL5-205ENST00000623535 SLC6A13Q9NSD5 602 aa5.62□□□□□ -1.51
CDKL5-205ENST00000623535 MN1Q10571 1320 aaPredicted RBP5.62□□□□□ -1.51
CDKL5-205ENST00000623535 C4AP0C0L4 1744 aa5.62□□□□□ -1.51
CDKL5-205ENST00000623535 C4BP0C0L5 1744 aa5.62□□□□□ -1.51
CDKL5-205ENST00000623535 APOC3P02656 99 aa5.62□□□□□ -1.51
CDKL5-205ENST00000623535 TFPI2P48307 235 aa5.62□□□□□ -1.51
CDKL5-205ENST00000623535 SFRP4Q6FHJ7 346 aaPredicted RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms