RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 RAD50Q92878 1312 aa2.81□□□□□ -1.96
CPNE3-213ENST00000622183 DOCK9Q9BZ29 2069 aa2.81□□□□□ -1.96
CPNE3-213ENST00000622183 SLC5A10A0PJK1 596 aa2.8□□□□□ -1.96
CPNE3-213ENST00000622183 TMEM72A0PK05 275 aa2.8□□□□□ -1.96
CPNE3-213ENST00000622183 ISPDA4D126 451 aa2.8□□□□□ -1.96
CPNE3-213ENST00000622183 RBBP9O75884 186 aa2.8□□□□□ -1.96
CPNE3-213ENST00000622183 NELFEP18615 380 aaKnown RBP2.8□□□□□ -1.96
CPNE3-213ENST00000622183 LCN1P31025 176 aa2.8□□□□□ -1.96
CPNE3-213ENST00000622183 OR12D2P58182 307 aa2.8□□□□□ -1.96
CPNE3-213ENST00000622183 GRB2P62993 217 aaKnown RBP2.8□□□□□ -1.96
CPNE3-213ENST00000622183 ELF3P78545 371 aaPredicted RBP2.8□□□□□ -1.96
CPNE3-213ENST00000622183 TNXAQ16473 311 aa2.8□□□□□ -1.96
CPNE3-213ENST00000622183 DEGS2Q6QHC5 323 aa2.8□□□□□ -1.96
CPNE3-213ENST00000622183 IGFL3Q6UXB1 125 aa2.8□□□□□ -1.96
CPNE3-213ENST00000622183 BBS7Q8IWZ6 715 aa2.8□□□□□ -1.96
CPNE3-213ENST00000622183 NELFCDQ8IXH7 590 aa2.8□□□□□ -1.96
CPNE3-213ENST00000622183 ORMDL3Q8N138 153 aa2.8□□□□□ -1.96
CPNE3-213ENST00000622183 CPB2Q96IY4 423 aa2.8□□□□□ -1.96
CPNE3-213ENST00000622183 ZNF396Q96N95 335 aaPredicted RBP2.8□□□□□ -1.96
CPNE3-213ENST00000622183 CTRCQ99895 268 aa2.8□□□□□ -1.96
CPNE3-213ENST00000622183 RSPO3Q9BXY4 272 aaPredicted RBP2.8□□□□□ -1.96
CPNE3-213ENST00000622183 SLC38A1Q9H2H9 487 aa2.8□□□□□ -1.96
CPNE3-213ENST00000622183 ACOT13Q9NPJ3 140 aa2.8□□□□□ -1.96
CPNE3-213ENST00000622183 ENPP4Q9Y6X5 453 aa2.8□□□□□ -1.96
CPNE3-213ENST00000622183 CABIN1Q9Y6J0 2220 aa2.8□□□□□ -1.96
CPNE3-213ENST00000622183 IGLV2-18A0A075B6J9 118 aa2.79□□□□□ -1.96
CPNE3-213ENST00000622183 LOC102724200A0A096LPH7 203 aaPredicted RBP2.79□□□□□ -1.96
CPNE3-213ENST00000622183 A0A0G2JMP0 313 aa2.79□□□□□ -1.96
CPNE3-213ENST00000622183 A0A0X1KG70 313 aa2.79□□□□□ -1.96
CPNE3-213ENST00000622183 MGAT4DA6NG13 374 aa2.79□□□□□ -1.96
CPNE3-213ENST00000622183 A8MUU9 505 aa2.79□□□□□ -1.96
CPNE3-213ENST00000622183 RPL36A-HNRNPH2H7BZ11 118 aa2.79□□□□□ -1.96
CPNE3-213ENST00000622183 YKT6O15498 198 aa2.79□□□□□ -1.96
CPNE3-213ENST00000622183 NEMFO60524 1076 aa2.79□□□□□ -1.96
CPNE3-213ENST00000622183 LHBP01229 141 aa2.79□□□□□ -1.96
CPNE3-213ENST00000622183 IGKV1D-16P01601 117 aa2.79□□□□□ -1.96
CPNE3-213ENST00000622183 CD8AP01732 235 aa2.79□□□□□ -1.96
CPNE3-213ENST00000622183 MAS1P04201 325 aa2.79□□□□□ -1.96
CPNE3-213ENST00000622183 OR4Q2P0C623 313 aa2.79□□□□□ -1.96
CPNE3-213ENST00000622183 HLA-GP17693 338 aa2.79□□□□□ -1.96
CPNE3-213ENST00000622183 RANBP1P43487 201 aa2.79□□□□□ -1.96
CPNE3-213ENST00000622183 DMTNQ08495 405 aa2.79□□□□□ -1.96
CPNE3-213ENST00000622183 C2orf80Q0P641 193 aa2.79□□□□□ -1.96
CPNE3-213ENST00000622183 TRDNQ13061 729 aa2.79□□□□□ -1.96
CPNE3-213ENST00000622183 MAPRE2Q15555 327 aa2.79□□□□□ -1.96
CPNE3-213ENST00000622183 PSG3Q16557 428 aa2.79□□□□□ -1.96
CPNE3-213ENST00000622183 IDNKQ5T6J7 187 aa2.79□□□□□ -1.96
CPNE3-213ENST00000622183 MORN3Q6PF18 240 aaPredicted RBP2.79□□□□□ -1.96
CPNE3-213ENST00000622183 LRRC52Q8N7C0 313 aa2.79□□□□□ -1.96
CPNE3-213ENST00000622183 OR4D6Q8NGJ1 314 aa2.79□□□□□ -1.96
CPNE3-213ENST00000622183 OR52N1Q8NH53 320 aa2.79□□□□□ -1.96
CPNE3-213ENST00000622183 DEDD2Q8WXF8 326 aa2.79□□□□□ -1.96
CPNE3-213ENST00000622183 HGDQ93099 445 aa2.79□□□□□ -1.96
CPNE3-213ENST00000622183 GPR82Q96P67 336 aa2.79□□□□□ -1.96
CPNE3-213ENST00000622183 IP6K3Q96PC2 410 aa2.79□□□□□ -1.96
CPNE3-213ENST00000622183 CIB1Q99828 191 aa2.79□□□□□ -1.96
CPNE3-213ENST00000622183 MARVELD1Q9BSK0 173 aa2.79□□□□□ -1.96
CPNE3-213ENST00000622183 COPS4Q9BT78 406 aa2.79□□□□□ -1.96
CPNE3-213ENST00000622183 FRMD8P1Q9BZ68 369 aaPredicted RBP2.79□□□□□ -1.96
CPNE3-213ENST00000622183 TBL1XR1Q9BZK7 514 aa2.79□□□□□ -1.96
CPNE3-213ENST00000622183 PORCNQ9H237 461 aa2.79□□□□□ -1.96
CPNE3-213ENST00000622183 C12orf4Q9NQ89 552 aa2.79□□□□□ -1.96
CPNE3-213ENST00000622183 CA10Q9NS85 328 aa2.79□□□□□ -1.96
CPNE3-213ENST00000622183 PRO0628Q9UI54 55 aa2.79□□□□□ -1.96
CPNE3-213ENST00000622183 YEATS2Q9ULM3 1422 aa2.78□□□□□ -1.96
CPNE3-213ENST00000622183 A8MWL6 223 aa2.78□□□□□ -1.96
CPNE3-213ENST00000622183 K7ERQ8 282 aa2.78□□□□□ -1.96
CPNE3-213ENST00000622183 TCAPO15273 167 aa2.78□□□□□ -1.96
CPNE3-213ENST00000622183 RNF113AO15541 343 aaKnown RBP2.78□□□□□ -1.96
CPNE3-213ENST00000622183 OR7C2O60412 319 aa2.78□□□□□ -1.96
CPNE3-213ENST00000622183 CDRT1O95170 752 aa2.78□□□□□ -1.96
CPNE3-213ENST00000622183 NTF3P20783 257 aa2.78□□□□□ -1.96
CPNE3-213ENST00000622183 DSTNP60981 165 aa2.78□□□□□ -1.96
CPNE3-213ENST00000622183 BTN1A1Q13410 526 aa2.78□□□□□ -1.96
CPNE3-213ENST00000622183 PMVKQ15126 192 aa2.78□□□□□ -1.96
CPNE3-213ENST00000622183 GUSBP1Q15486 140 aa2.78□□□□□ -1.96
CPNE3-213ENST00000622183 LY6EQ16553 131 aa2.78□□□□□ -1.96
CPNE3-213ENST00000622183 KLHL12Q53G59 568 aa2.78□□□□□ -1.96
CPNE3-213ENST00000622183 RESP18Q5W5W9 173 aa2.78□□□□□ -1.96
CPNE3-213ENST00000622183 PRSS54Q6PEW0 395 aa2.78□□□□□ -1.96
CPNE3-213ENST00000622183 CLEC19AQ6UXS0 136 aa2.78□□□□□ -1.96
CPNE3-213ENST00000622183 FAM19A1Q7Z5A9 133 aa2.78□□□□□ -1.96
CPNE3-213ENST00000622183 MTERF4Q7Z6M4 381 aaKnown RBP2.78□□□□□ -1.96
CPNE3-213ENST00000622183 GAPTQ8N292 157 aa2.78□□□□□ -1.96
CPNE3-213ENST00000622183 ATPAF2Q8N5M1 289 aa2.78□□□□□ -1.96
CPNE3-213ENST00000622183 OR51Q1Q8NH59 317 aa2.78□□□□□ -1.96
CPNE3-213ENST00000622183 RILPQ96NA2 401 aa2.78□□□□□ -1.96
CPNE3-213ENST00000622183 ZFP3Q96NJ6 502 aa2.78□□□□□ -1.96
CPNE3-213ENST00000622183 SPACA5Q96QH8 159 aa2.78□□□□□ -1.96
CPNE3-213ENST00000622183 METTL26Q96S19 204 aa2.78□□□□□ -1.96
CPNE3-213ENST00000622183 BEX2Q9BXY8 128 aa2.78□□□□□ -1.96
CPNE3-213ENST00000622183 SHCBP1LQ9BZQ2 653 aa2.78□□□□□ -1.96
CPNE3-213ENST00000622183 CLEC2DQ9UHP7 191 aa2.78□□□□□ -1.96
CPNE3-213ENST00000622183 ANXA10Q9UJ72 324 aa2.78□□□□□ -1.96
CPNE3-213ENST00000622183 NOSIPQ9Y314 301 aaKnown RBP2.78□□□□□ -1.96
CPNE3-213ENST00000622183 IGKV1-6A0A0C4DH72 117 aa2.77□□□□□ -1.97
CPNE3-213ENST00000622183 A0A1B0GW15 77 aa2.77□□□□□ -1.97
CPNE3-213ENST00000622183 UPK1AO00322 258 aa2.77□□□□□ -1.97
CPNE3-213ENST00000622183 RTL8CO15255 209 aa2.77□□□□□ -1.97
CPNE3-213ENST00000622183 IGKV1-39P01597 117 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms