RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 GZMKP49863 264 aa11.95□□□□□ -0.5
CBWD3-217ENST00000621474 INSL4Q14641 139 aa11.95□□□□□ -0.5
CBWD3-217ENST00000621474 CNN3Q15417 329 aaKnown RBP11.95□□□□□ -0.5
CBWD3-217ENST00000621474 Q499Y3 187 aa11.95□□□□□ -0.5
CBWD3-217ENST00000621474 CYB5R2Q6BCY4 276 aa11.95□□□□□ -0.5
CBWD3-217ENST00000621474 ZNF573Q86YE8 665 aa11.95□□□□□ -0.5
CBWD3-217ENST00000621474 SPSB1Q96BD6 273 aa11.95□□□□□ -0.5
CBWD3-217ENST00000621474 BORCS8Q96FH0 119 aa11.95□□□□□ -0.5
CBWD3-217ENST00000621474 ZNF488Q96MN9 340 aa11.95□□□□□ -0.5
CBWD3-217ENST00000621474 OPALINQ96PE5 141 aa11.95□□□□□ -0.5
CBWD3-217ENST00000621474 SPACA5Q96QH8 159 aa11.95□□□□□ -0.5
CBWD3-217ENST00000621474 OR14A2Q96R54 314 aa11.95□□□□□ -0.5
CBWD3-217ENST00000621474 YTHDF1Q9BYJ9 559 aaKnown RBP11.95□□□□□ -0.5
CBWD3-217ENST00000621474 TAS2R4Q9NYW5 299 aa11.95□□□□□ -0.5
CBWD3-217ENST00000621474 SLC7A11Q9UPY5 501 aa11.95□□□□□ -0.5
CBWD3-217ENST00000621474 A0A1B0GW55 424 aa11.94□□□□□ -0.5
CBWD3-217ENST00000621474 SULT1B1O43704 296 aa11.94□□□□□ -0.5
CBWD3-217ENST00000621474 SC5DO75845 299 aa11.94□□□□□ -0.5
CBWD3-217ENST00000621474 DUX4L2P0CJ85 424 aa11.94□□□□□ -0.5
CBWD3-217ENST00000621474 DUX4L3P0CJ86 424 aa11.94□□□□□ -0.5
CBWD3-217ENST00000621474 DUX4L4P0CJ87 422 aa11.94□□□□□ -0.5
CBWD3-217ENST00000621474 DUX4L5P0CJ88 424 aa11.94□□□□□ -0.5
CBWD3-217ENST00000621474 DUX4L6P0CJ89 424 aa11.94□□□□□ -0.5
CBWD3-217ENST00000621474 DUX4L7P0CJ90 424 aa11.94□□□□□ -0.5
CBWD3-217ENST00000621474 PGA5P0DJD9 388 aa11.94□□□□□ -0.5
CBWD3-217ENST00000621474 IGFBP3P17936 291 aaPredicted RBP11.94□□□□□ -0.5
CBWD3-217ENST00000621474 RBP2P50120 134 aa11.94□□□□□ -0.5
CBWD3-217ENST00000621474 GMFBP60983 142 aa11.94□□□□□ -0.5
CBWD3-217ENST00000621474 ERVK11-1P61568 191 aa11.94□□□□□ -0.5
CBWD3-217ENST00000621474 IL24Q13007 206 aa11.94□□□□□ -0.5
CBWD3-217ENST00000621474 DUX4L9Q6RFH8 374 aaPredicted RBP11.94□□□□□ -0.5
CBWD3-217ENST00000621474 ZNF841Q6ZN19 808 aa11.94□□□□□ -0.5
CBWD3-217ENST00000621474 DCDC5Q6ZRR9 648 aa11.94□□□□□ -0.5
CBWD3-217ENST00000621474 POC1AQ8NBT0 407 aa11.94□□□□□ -0.5
CBWD3-217ENST00000621474 OR5D14Q8NGL3 314 aa11.94□□□□□ -0.5
CBWD3-217ENST00000621474 RAB39BQ96DA2 213 aa11.94□□□□□ -0.5
CBWD3-217ENST00000621474 PKIBQ9C010 78 aa11.94□□□□□ -0.5
CBWD3-217ENST00000621474 LPAR2Q9HBW0 351 aa11.94□□□□□ -0.5
CBWD3-217ENST00000621474 DUX4Q9UBX2 424 aa11.94□□□□□ -0.5
CBWD3-217ENST00000621474 TRBV5-7A0A0A0MS05 114 aa11.93□□□□□ -0.5
CBWD3-217ENST00000621474 TRAV38-1A0A0B4J264 116 aa11.93□□□□□ -0.5
CBWD3-217ENST00000621474 MAGEA13PA6NCF6 341 aa11.93□□□□□ -0.5
CBWD3-217ENST00000621474 KIAA1324LA8MWY0 1029 aaPredicted RBP11.93□□□□□ -0.5
CBWD3-217ENST00000621474 B4DSR2 109 aa11.93□□□□□ -0.5
CBWD3-217ENST00000621474 F8VVB4 439 aa11.93□□□□□ -0.5
CBWD3-217ENST00000621474 F8VWA3 439 aa11.93□□□□□ -0.5
CBWD3-217ENST00000621474 PIN1P1O15428 100 aa11.93□□□□□ -0.5
CBWD3-217ENST00000621474 MRPS14O60783 128 aaKnown RBP11.93□□□□□ -0.5
CBWD3-217ENST00000621474 NOS1APO75052 506 aaPredicted RBP11.93□□□□□ -0.5
CBWD3-217ENST00000621474 GYPAP02724 150 aa11.93□□□□□ -0.5
CBWD3-217ENST00000621474 TFF1P04155 84 aa11.93□□□□□ -0.5
CBWD3-217ENST00000621474 MUC1P15941 1255 aaPredicted RBP11.93□□□□□ -0.5
CBWD3-217ENST00000621474 MLLT11Q13015 90 aaPredicted RBP11.93□□□□□ -0.5
CBWD3-217ENST00000621474 TPBGQ13641 420 aa11.93□□□□□ -0.5
CBWD3-217ENST00000621474 LIPKQ5VXJ0 399 aa11.93□□□□□ -0.5
CBWD3-217ENST00000621474 STUMQ69YW2 141 aa11.93□□□□□ -0.5
CBWD3-217ENST00000621474 SPARTQ8N0X7 666 aa11.93□□□□□ -0.5
CBWD3-217ENST00000621474 BATF2Q8N1L9 274 aa11.93□□□□□ -0.5
CBWD3-217ENST00000621474 LINC01356Q8N9X3 169 aa11.93□□□□□ -0.5
CBWD3-217ENST00000621474 DERL3Q96Q80 235 aa11.93□□□□□ -0.5
CBWD3-217ENST00000621474 MGLLQ99685 303 aa11.93□□□□□ -0.5
CBWD3-217ENST00000621474 NRIP2Q9BQI9 281 aa11.93□□□□□ -0.5
CBWD3-217ENST00000621474 HES4Q9HCC6 221 aa11.93□□□□□ -0.5
CBWD3-217ENST00000621474 ISYNA1Q9NPH2 558 aa11.93□□□□□ -0.5
CBWD3-217ENST00000621474 MTCH1Q9NZJ7 389 aa11.93□□□□□ -0.5
CBWD3-217ENST00000621474 SF3B6Q9Y3B4 125 aaKnown RBP11.93□□□□□ -0.5
CBWD3-217ENST00000621474 TRAV8-7A0A075B6U6 113 aa11.93□□□□□ -0.5
CBWD3-217ENST00000621474 IGKV1-12A0A0C4DH73 117 aa11.93□□□□□ -0.5
CBWD3-217ENST00000621474 A8MXK9 166 aa11.93□□□□□ -0.5
CBWD3-217ENST00000621474 ZNF879B4DU55 563 aa11.93□□□□□ -0.5
CBWD3-217ENST00000621474 TGFAP01135 160 aa11.93□□□□□ -0.5
CBWD3-217ENST00000621474 IGKV1D-12P01611 117 aa11.93□□□□□ -0.5
CBWD3-217ENST00000621474 CD2P06729 351 aa11.93□□□□□ -0.5
CBWD3-217ENST00000621474 MSMBP08118 114 aa11.93□□□□□ -0.5
CBWD3-217ENST00000621474 ACAA1P09110 424 aaPredicted RBP11.93□□□□□ -0.5
CBWD3-217ENST00000621474 HSMCR30P0CW71 290 aa11.93□□□□□ -0.5
CBWD3-217ENST00000621474 RPS2P15880 293 aaKnown RBP11.93□□□□□ -0.5
CBWD3-217ENST00000621474 CPEP16870 476 aa11.93□□□□□ -0.5
CBWD3-217ENST00000621474 GLRA1P23415 457 aa11.93□□□□□ -0.5
CBWD3-217ENST00000621474 GP2P55259 537 aaKnown RBP11.93□□□□□ -0.5
CBWD3-217ENST00000621474 MTCP1P56278 107 aa11.93□□□□□ -0.5
CBWD3-217ENST00000621474 GPR50Q13585 617 aa11.93□□□□□ -0.5
CBWD3-217ENST00000621474 MICBQ29980 383 aa11.93□□□□□ -0.5
CBWD3-217ENST00000621474 LHFPL2Q6ZUX7 228 aa11.93□□□□□ -0.5
CBWD3-217ENST00000621474 PHC2Q8IXK0 858 aa11.93□□□□□ -0.5
CBWD3-217ENST00000621474 OR5T2Q8NGG2 359 aa11.93□□□□□ -0.5
CBWD3-217ENST00000621474 ZNF671Q8TAW3 534 aa11.93□□□□□ -0.5
CBWD3-217ENST00000621474 RFT1Q96AA3 541 aa11.93□□□□□ -0.5
CBWD3-217ENST00000621474 C12orf43Q96C57 262 aaKnown RBP11.93□□□□□ -0.5
CBWD3-217ENST00000621474 NKX3-1Q99801 234 aaPredicted RBP11.93□□□□□ -0.5
CBWD3-217ENST00000621474 SMURF1Q9HCE7 757 aa11.93□□□□□ -0.5
CBWD3-217ENST00000621474 SNTG1Q9NSN8 517 aa11.93□□□□□ -0.5
CBWD3-217ENST00000621474 PCDHB10Q9UN67 800 aa11.93□□□□□ -0.5
CBWD3-217ENST00000621474 POLDIP2Q9Y2S7 368 aa11.93□□□□□ -0.5
CBWD3-217ENST00000621474 A0A1W2PPK0 400 aa11.92□□□□□ -0.5
CBWD3-217ENST00000621474 GPX5O75715 221 aa11.92□□□□□ -0.5
CBWD3-217ENST00000621474 PLATP00750 562 aa11.92□□□□□ -0.5
CBWD3-217ENST00000621474 FSTP19883 344 aa11.92□□□□□ -0.5
CBWD3-217ENST00000621474 PRKACBP22694 351 aa11.92□□□□□ -0.5
CBWD3-217ENST00000621474 ATP1B3P54709 279 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms