RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 EXOSC4Q9NPD3 245 aaKnown RBP11.46□□□□□ -0.57
NEK3-210ENST00000620675 TXNL4BQ9NX01 149 aaKnown RBP11.46□□□□□ -0.57
NEK3-210ENST00000620675 IGHV3OR15-7A0A075B7D8 119 aa11.45□□□□□ -0.58
NEK3-210ENST00000620675 IGKV1-12A0A0C4DH73 117 aa11.45□□□□□ -0.58
NEK3-210ENST00000620675 LOC100506127A0A0U1RQW1 187 aa11.45□□□□□ -0.58
NEK3-210ENST00000620675 TRDV1A0A1B0GX56 115 aa11.45□□□□□ -0.58
NEK3-210ENST00000620675 TMEM210A6NLX4 147 aa11.45□□□□□ -0.58
NEK3-210ENST00000620675 PPIHO43447 177 aaKnown RBP11.45□□□□□ -0.58
NEK3-210ENST00000620675 IGKV1D-12P01611 117 aa11.45□□□□□ -0.58
NEK3-210ENST00000620675 CALCBP10092 127 aa11.45□□□□□ -0.58
NEK3-210ENST00000620675 SRMP19623 302 aa11.45□□□□□ -0.58
NEK3-210ENST00000620675 BDKRB2P30411 391 aa11.45□□□□□ -0.58
NEK3-210ENST00000620675 RBP2P50120 134 aa11.45□□□□□ -0.58
NEK3-210ENST00000620675 LSM3P62310 102 aaKnown RBP11.45□□□□□ -0.58
NEK3-210ENST00000620675 MRPS11P82912 194 aaKnown RBP11.45□□□□□ -0.58
NEK3-210ENST00000620675 HSD17B12Q53GQ0 312 aa11.45□□□□□ -0.58
NEK3-210ENST00000620675 SLC25A26Q70HW3 274 aa11.45□□□□□ -0.58
NEK3-210ENST00000620675 SPSB1Q96BD6 273 aa11.45□□□□□ -0.58
NEK3-210ENST00000620675 ABCB9Q9NP78 766 aa11.45□□□□□ -0.58
NEK3-210ENST00000620675 MTCH1Q9NZJ7 389 aa11.45□□□□□ -0.58
NEK3-210ENST00000620675 STUB1Q9UNE7 303 aa11.45□□□□□ -0.58
NEK3-210ENST00000620675 WIPI2Q9Y4P8 454 aa11.45□□□□□ -0.58
NEK3-210ENST00000620675 MTORP42345 2549 aa11.45□□□□□ -0.58
NEK3-210ENST00000620675 LHBP01229 141 aa11.45□□□□□ -0.58
NEK3-210ENST00000620675 OCMP0CE72 109 aaPredicted RBP11.45□□□□□ -0.58
NEK3-210ENST00000620675 PSMA1P25786 263 aaKnown RBP11.45□□□□□ -0.58
NEK3-210ENST00000620675 MAPK3P27361 379 aaPredicted RBP11.45□□□□□ -0.58
NEK3-210ENST00000620675 OR3A4PP47883 348 aa11.45□□□□□ -0.58
NEK3-210ENST00000620675 NPBWR2P48146 333 aa11.45□□□□□ -0.58
NEK3-210ENST00000620675 PDLIM4P50479 330 aa11.45□□□□□ -0.58
NEK3-210ENST00000620675 ZP1P60852 638 aa11.45□□□□□ -0.58
NEK3-210ENST00000620675 ZMYND11Q15326 602 aa11.45□□□□□ -0.58
NEK3-210ENST00000620675 TRAM1Q15629 374 aa11.45□□□□□ -0.58
NEK3-210ENST00000620675 DDI2Q5TDH0 399 aa11.45□□□□□ -0.58
NEK3-210ENST00000620675 CLEC2AQ6UVW9 174 aa11.45□□□□□ -0.58
NEK3-210ENST00000620675 NR2C2APQ86WQ0 139 aa11.45□□□□□ -0.58
NEK3-210ENST00000620675 LYPD6Q86Y78 171 aa11.45□□□□□ -0.58
NEK3-210ENST00000620675 CIARTQ8N365 385 aaPredicted RBP11.45□□□□□ -0.58
NEK3-210ENST00000620675 DEFB108BQ8NET1 73 aa11.45□□□□□ -0.58
NEK3-210ENST00000620675 SLAMF9Q96A28 289 aa11.45□□□□□ -0.58
NEK3-210ENST00000620675 FUNDC2Q9BWH2 189 aa11.45□□□□□ -0.58
NEK3-210ENST00000620675 TMEM138Q9NPI0 162 aa11.45□□□□□ -0.58
NEK3-210ENST00000620675 DLL4Q9NR61 685 aa11.45□□□□□ -0.58
NEK3-210ENST00000620675 RNF7Q9UBF6 113 aa11.45□□□□□ -0.58
NEK3-210ENST00000620675 IL36RNQ9UBH0 155 aa11.45□□□□□ -0.58
NEK3-210ENST00000620675 DSCAML1Q8TD84 2053 aa11.44□□□□□ -0.58
NEK3-210ENST00000620675 VWC2LB2RUY7 222 aa11.44□□□□□ -0.58
NEK3-210ENST00000620675 ALX3O95076 343 aa11.44□□□□□ -0.58
NEK3-210ENST00000620675 PRKACBP22694 351 aa11.44□□□□□ -0.58
NEK3-210ENST00000620675 ATP1B3P54709 279 aa11.44□□□□□ -0.58
NEK3-210ENST00000620675 PPP3R1P63098 170 aa11.44□□□□□ -0.58
NEK3-210ENST00000620675 LHFPL2Q6ZUX7 228 aa11.44□□□□□ -0.58
NEK3-210ENST00000620675 ZNF573Q86YE8 665 aa11.44□□□□□ -0.58
NEK3-210ENST00000620675 FOXJ3Q9UPW0 622 aa11.44□□□□□ -0.58
NEK3-210ENST00000620675 AK6Q9Y3D8 172 aaKnown RBP11.44□□□□□ -0.58
NEK3-210ENST00000620675 A0A096LNT2 108 aa11.44□□□□□ -0.58
NEK3-210ENST00000620675 IGHV4-61A0A0C4DH41 118 aa11.44□□□□□ -0.58
NEK3-210ENST00000620675 J3QT63 122 aa11.44□□□□□ -0.58
NEK3-210ENST00000620675 MPZP25189 248 aa11.44□□□□□ -0.58
NEK3-210ENST00000620675 GIFP27352 417 aa11.44□□□□□ -0.58
NEK3-210ENST00000620675 OR10A3P58181 314 aa11.44□□□□□ -0.58
NEK3-210ENST00000620675 MZT1Q08AG7 82 aa11.44□□□□□ -0.58
NEK3-210ENST00000620675 PDZK1IP1Q13113 114 aa11.44□□□□□ -0.58
NEK3-210ENST00000620675 SLC16A12Q6ZSM3 486 aa11.44□□□□□ -0.58
NEK3-210ENST00000620675 OR5T2Q8NGG2 359 aa11.44□□□□□ -0.58
NEK3-210ENST00000620675 TECTBQ96PL2 329 aa11.44□□□□□ -0.58
NEK3-210ENST00000620675 TCF7L1Q9HCS4 588 aa11.44□□□□□ -0.58
NEK3-210ENST00000620675 SNTG1Q9NSN8 517 aa11.44□□□□□ -0.58
NEK3-210ENST00000620675 CKLFQ9UBR5 152 aa11.44□□□□□ -0.58
NEK3-210ENST00000620675 ZFHX3Q15911 3703 aa11.44□□□□□ -0.58
NEK3-210ENST00000620675 A0A1B0GW55 424 aa11.43□□□□□ -0.58
NEK3-210ENST00000620675 SRRM5B3KS81 715 aa11.43□□□□□ -0.58
NEK3-210ENST00000620675 CLDN25C9JDP6 229 aa11.43□□□□□ -0.58
NEK3-210ENST00000620675 RNF223E7ERA6 249 aa11.43□□□□□ -0.58
NEK3-210ENST00000620675 CDRT1O95170 752 aa11.43□□□□□ -0.58
NEK3-210ENST00000620675 IGHV2-70P01814 119 aa11.43□□□□□ -0.58
NEK3-210ENST00000620675 CLEC2LP0C7M8 214 aa11.43□□□□□ -0.58
NEK3-210ENST00000620675 DUX4L2P0CJ85 424 aa11.43□□□□□ -0.58
NEK3-210ENST00000620675 DUX4L3P0CJ86 424 aa11.43□□□□□ -0.58
NEK3-210ENST00000620675 DUX4L4P0CJ87 422 aa11.43□□□□□ -0.58
NEK3-210ENST00000620675 DUX4L5P0CJ88 424 aa11.43□□□□□ -0.58
NEK3-210ENST00000620675 DUX4L6P0CJ89 424 aa11.43□□□□□ -0.58
NEK3-210ENST00000620675 DUX4L7P0CJ90 424 aa11.43□□□□□ -0.58
NEK3-210ENST00000620675 IL2RGP31785 369 aa11.43□□□□□ -0.58
NEK3-210ENST00000620675 ZNF93P35789 620 aaPredicted RBP11.43□□□□□ -0.58
NEK3-210ENST00000620675 GPR6P46095 362 aaPredicted RBP11.43□□□□□ -0.58
NEK3-210ENST00000620675 ZNF181Q2M3W8 571 aa11.43□□□□□ -0.58
NEK3-210ENST00000620675 DUX4L9Q6RFH8 374 aaPredicted RBP11.43□□□□□ -0.58
NEK3-210ENST00000620675 METAP1DQ6UB28 335 aaPredicted RBP11.43□□□□□ -0.58
NEK3-210ENST00000620675 PRSS57Q6UWY2 283 aa11.43□□□□□ -0.58
NEK3-210ENST00000620675 JAGN1Q8N5M9 183 aa11.43□□□□□ -0.58
NEK3-210ENST00000620675 OR4D6Q8NGJ1 314 aa11.43□□□□□ -0.58
NEK3-210ENST00000620675 OR10K1Q8NGX5 313 aa11.43□□□□□ -0.58
NEK3-210ENST00000620675 ERGIC1Q969X5 290 aa11.43□□□□□ -0.58
NEK3-210ENST00000620675 KCNK15Q9H427 330 aa11.43□□□□□ -0.58
NEK3-210ENST00000620675 CNTD2Q9H8S5 307 aa11.43□□□□□ -0.58
NEK3-210ENST00000620675 TMEM165Q9HC07 324 aa11.43□□□□□ -0.58
NEK3-210ENST00000620675 RBFOX1Q9NWB1 397 aaKnown RBP11.43□□□□□ -0.58
NEK3-210ENST00000620675 DUX4Q9UBX2 424 aa11.43□□□□□ -0.58
NEK3-210ENST00000620675 NPTNQ9Y639 398 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms