RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 TICRRQ7Z2Z1 1910 aa12.25□□□□□ -0.45
CIITA-213ENST00000618327 TMEM272A0A1B0GTI8 110 aa12.25□□□□□ -0.45
CIITA-213ENST00000618327 SERPINE3A8MV23 424 aa12.25□□□□□ -0.45
CIITA-213ENST00000618327 EFSO43281 561 aa12.25□□□□□ -0.45
CIITA-213ENST00000618327 SEMA7AO75326 666 aa12.25□□□□□ -0.45
CIITA-213ENST00000618327 CTXN2P0C2S0 81 aa12.25□□□□□ -0.45
CIITA-213ENST00000618327 TBPP20226 339 aa12.25□□□□□ -0.45
CIITA-213ENST00000618327 HBG1P69891 147 aa12.25□□□□□ -0.45
CIITA-213ENST00000618327 HBG2P69892 147 aa12.25□□□□□ -0.45
CIITA-213ENST00000618327 SRPXP78539 464 aa12.25□□□□□ -0.45
CIITA-213ENST00000618327 OR10J5Q8NHC4 309 aa12.25□□□□□ -0.45
CIITA-213ENST00000618327 RNF32Q9H0A6 362 aa12.25□□□□□ -0.45
CIITA-213ENST00000618327 MS4A18H0YCH9 400 aa12.25□□□□□ -0.45
CIITA-213ENST00000618327 MPPED1O15442 326 aa12.25□□□□□ -0.45
CIITA-213ENST00000618327 SCAF4O95104 1147 aaKnown RBP12.25□□□□□ -0.45
CIITA-213ENST00000618327 GIPP09681 153 aaPredicted RBP12.25□□□□□ -0.45
CIITA-213ENST00000618327 HRH1P35367 487 aa12.25□□□□□ -0.45
CIITA-213ENST00000618327 MS4A18Q3C1V0 323 aa12.25□□□□□ -0.45
CIITA-213ENST00000618327 LAIR2Q6ISS4 152 aa12.25□□□□□ -0.45
CIITA-213ENST00000618327 OR2W3Q7Z3T1 314 aa12.25□□□□□ -0.45
CIITA-213ENST00000618327 BAGE3Q86Y29 109 aa12.25□□□□□ -0.45
CIITA-213ENST00000618327 BAGE2Q86Y30 109 aa12.25□□□□□ -0.45
CIITA-213ENST00000618327 CPEB3Q8NE35 698 aaKnown RBP12.25□□□□□ -0.45
CIITA-213ENST00000618327 OR10AC1Q8NH08 325 aa12.25□□□□□ -0.45
CIITA-213ENST00000618327 BSCL2Q96G97 398 aaPredicted RBP12.25□□□□□ -0.45
CIITA-213ENST00000618327 TXN2Q99757 166 aa12.25□□□□□ -0.45
CIITA-213ENST00000618327 NTN3O00634 580 aaPredicted RBP12.25□□□□□ -0.45
CIITA-213ENST00000618327 PHF1O43189 567 aaPredicted RBP12.25□□□□□ -0.45
CIITA-213ENST00000618327 MT-ND4LP03901 98 aa12.25□□□□□ -0.45
CIITA-213ENST00000618327 GLAP06280 429 aa12.25□□□□□ -0.45
CIITA-213ENST00000618327 PTHLHP12272 177 aa12.25□□□□□ -0.45
CIITA-213ENST00000618327 MPGP29372 298 aa12.25□□□□□ -0.45
CIITA-213ENST00000618327 ATPAF1Q5TC12 328 aaPredicted RBP12.25□□□□□ -0.45
CIITA-213ENST00000618327 KCNRGQ8N5I3 272 aa12.25□□□□□ -0.45
CIITA-213ENST00000618327 RFLNBQ8N5W9 214 aa12.25□□□□□ -0.45
CIITA-213ENST00000618327 ZBTB44Q8NCP5 570 aa12.25□□□□□ -0.45
CIITA-213ENST00000618327 ZNF680Q8NEM1 530 aa12.25□□□□□ -0.45
CIITA-213ENST00000618327 C2CD4CQ8TF44 421 aa12.25□□□□□ -0.45
CIITA-213ENST00000618327 ZNF2Q9BSG1 426 aaPredicted RBP12.25□□□□□ -0.45
CIITA-213ENST00000618327 ST6GALNAC2Q9UJ37 374 aa12.25□□□□□ -0.45
CIITA-213ENST00000618327 PMP22Q01453 160 aa12.24□□□□□ -0.45
CIITA-213ENST00000618327 DEFB108BQ8NET1 73 aa12.24□□□□□ -0.45
CIITA-213ENST00000618327 NFAM1Q8NET5 270 aaPredicted RBP12.24□□□□□ -0.45
CIITA-213ENST00000618327 VOPP1Q96AW1 172 aa12.24□□□□□ -0.45
CIITA-213ENST00000618327 UBL7Q96S82 380 aaPredicted RBP12.24□□□□□ -0.45
CIITA-213ENST00000618327 KCNK17Q96T54 332 aa12.24□□□□□ -0.45
CIITA-213ENST00000618327 CNTD2Q9H8S5 307 aa12.24□□□□□ -0.45
CIITA-213ENST00000618327 SIRT4Q9Y6E7 314 aaPredicted RBP12.24□□□□□ -0.45
CIITA-213ENST00000618327 MYLKQ15746 1914 aa12.24□□□□□ -0.45
CIITA-213ENST00000618327 KLF4O43474 513 aa12.24□□□□□ -0.45
CIITA-213ENST00000618327 UPK3AO75631 287 aa12.24□□□□□ -0.45
CIITA-213ENST00000618327 PNLIPRP3Q17RR3 467 aa12.24□□□□□ -0.45
CIITA-213ENST00000618327 TSPO2Q5TGU0 170 aa12.24□□□□□ -0.45
CIITA-213ENST00000618327 BRICD5Q6PL45 260 aa12.24□□□□□ -0.45
CIITA-213ENST00000618327 OR4C16Q8NGL9 310 aa12.24□□□□□ -0.45
CIITA-213ENST00000618327 H1FXQ92522 213 aaKnown RBP12.24□□□□□ -0.45
CIITA-213ENST00000618327 IMMP1LQ96LU5 166 aa12.24□□□□□ -0.45
CIITA-213ENST00000618327 HES7Q9BYE0 225 aa12.24□□□□□ -0.45
CIITA-213ENST00000618327 OR2H1Q9GZK4 316 aa12.24□□□□□ -0.45
CIITA-213ENST00000618327 TERTO14746 1132 aaKnown RBP12.24□□□□□ -0.45
CIITA-213ENST00000618327 GFRA3O60609 400 aa12.24□□□□□ -0.45
CIITA-213ENST00000618327 TUSC2O75896 110 aa12.24□□□□□ -0.45
CIITA-213ENST00000618327 PRSS12P56730 875 aa12.24□□□□□ -0.45
CIITA-213ENST00000618327 PRDX4Q13162 271 aa12.24□□□□□ -0.45
CIITA-213ENST00000618327 SKA3Q8IX90 412 aa12.24□□□□□ -0.45
CIITA-213ENST00000618327 CHCHD2Q9Y6H1 151 aaPredicted RBP12.24□□□□□ -0.45
CIITA-213ENST00000618327 TMEM200CA6NKL6 621 aa12.23□□□□□ -0.45
CIITA-213ENST00000618327 TRIM77I1YAP6 450 aa12.23□□□□□ -0.45
CIITA-213ENST00000618327 CTAG2O75638 210 aa12.23□□□□□ -0.45
CIITA-213ENST00000618327 SNTB1Q13884 538 aaKnown RBP12.23□□□□□ -0.45
CIITA-213ENST00000618327 AARDQ4LEZ3 155 aa12.23□□□□□ -0.45
CIITA-213ENST00000618327 SHEQ5VZ18 495 aa12.23□□□□□ -0.45
CIITA-213ENST00000618327 MSI2Q96DH6 328 aaKnown RBP12.23□□□□□ -0.45
CIITA-213ENST00000618327 UHRF2Q96PU4 802 aa12.23□□□□□ -0.45
CIITA-213ENST00000618327 ADAT1Q9BUB4 502 aaKnown RBP12.23□□□□□ -0.45
CIITA-213ENST00000618327 FLVCR1Q9Y5Y0 555 aa12.23□□□□□ -0.45
CIITA-213ENST00000618327 LRP3O75074 770 aa12.23□□□□□ -0.45
CIITA-213ENST00000618327 UMODP07911 640 aa12.23□□□□□ -0.45
CIITA-213ENST00000618327 CA6P23280 308 aa12.23□□□□□ -0.45
CIITA-213ENST00000618327 NANOS3P60323 173 aaKnown RBP12.23□□□□□ -0.45
CIITA-213ENST00000618327 NUFIP2Q7Z417 695 aaKnown RBP12.23□□□□□ -0.45
CIITA-213ENST00000618327 CISD2Q8N5K1 135 aaKnown RBP12.23□□□□□ -0.45
CIITA-213ENST00000618327 ASB5Q8WWX0 329 aa12.23□□□□□ -0.45
CIITA-213ENST00000618327 GMPPAQ96IJ6 420 aaPredicted RBP12.23□□□□□ -0.45
CIITA-213ENST00000618327 FAM117AQ9C073 453 aa12.23□□□□□ -0.45
CIITA-213ENST00000618327 FLVCR2Q9UPI3 526 aa12.23□□□□□ -0.45
CIITA-213ENST00000618327 GAB2Q9UQC2 676 aa12.23□□□□□ -0.45
CIITA-213ENST00000618327 H3BMH7 237 aa12.23□□□□□ -0.45
CIITA-213ENST00000618327 NUBP1P53384 320 aa12.23□□□□□ -0.45
CIITA-213ENST00000618327 TESK1Q15569 626 aa12.23□□□□□ -0.45
CIITA-213ENST00000618327 ZNF239Q16600 458 aaKnown RBP12.23□□□□□ -0.45
CIITA-213ENST00000618327 FBXW9Q5XUX1 488 aa12.23□□□□□ -0.45
CIITA-213ENST00000618327 OR6K3Q8NGY3 331 aa12.23□□□□□ -0.45
CIITA-213ENST00000618327 TMEM229AB2RXF0 380 aa12.23□□□□□ -0.45
CIITA-213ENST00000618327 RGS11O94810 467 aa12.23□□□□□ -0.45
CIITA-213ENST00000618327 APOA2P02652 100 aa12.23□□□□□ -0.45
CIITA-213ENST00000618327 S100A8P05109 93 aa12.23□□□□□ -0.45
CIITA-213ENST00000618327 PGA4P0DJD7 388 aa12.23□□□□□ -0.45
CIITA-213ENST00000618327 PGA3P0DJD8 388 aa12.23□□□□□ -0.45
CIITA-213ENST00000618327 OR5H8P0DN80 308 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms