RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 PLEKHJ1Q9NW61 149 aa10.79□□□□□ -0.68
CIITA-212ENST00000618207 PLSCR5A0PG75 271 aa10.79□□□□□ -0.68
CIITA-212ENST00000618207 ZNF503-AS2A6NEH8 195 aa10.79□□□□□ -0.68
CIITA-212ENST00000618207 EEF1E1-BLOC1S5C9J1V9 151 aa10.79□□□□□ -0.68
CIITA-212ENST00000618207 TEX46H3BTG2 121 aa10.79□□□□□ -0.68
CIITA-212ENST00000618207 KCNAB3O43448 404 aa10.79□□□□□ -0.68
CIITA-212ENST00000618207 HPNP05981 417 aa10.79□□□□□ -0.68
CIITA-212ENST00000618207 CCL11P51671 97 aa10.79□□□□□ -0.68
CIITA-212ENST00000618207 RSU1Q15404 277 aa10.79□□□□□ -0.68
CIITA-212ENST00000618207 JMJD6Q6NYC1 403 aaPredicted RBP10.79□□□□□ -0.68
CIITA-212ENST00000618207 MOB3CQ70IA8 216 aa10.79□□□□□ -0.68
CIITA-212ENST00000618207 OR2W3Q7Z3T1 314 aa10.79□□□□□ -0.68
CIITA-212ENST00000618207 MCEMP1Q8IX19 187 aa10.79□□□□□ -0.68
CIITA-212ENST00000618207 SSC4DQ8WTU2 575 aa10.79□□□□□ -0.68
CIITA-212ENST00000618207 ZNF629Q9UEG4 869 aaPredicted RBP10.79□□□□□ -0.68
CIITA-212ENST00000618207 MCTS1Q9ULC4 181 aaKnown RBP10.79□□□□□ -0.68
CIITA-212ENST00000618207 C13orf42A0A1B0GVH6 325 aa10.78□□□□□ -0.68
CIITA-212ENST00000618207 C5orf49A4QMS7 147 aa10.78□□□□□ -0.68
CIITA-212ENST00000618207 MFNGO00587 321 aa10.78□□□□□ -0.68
CIITA-212ENST00000618207 NRASP01111 189 aa10.78□□□□□ -0.68
CIITA-212ENST00000618207 SERPINA5P05154 406 aa10.78□□□□□ -0.68
CIITA-212ENST00000618207 SFTPCP11686 197 aa10.78□□□□□ -0.68
CIITA-212ENST00000618207 PPP3CBP16298 524 aa10.78□□□□□ -0.68
CIITA-212ENST00000618207 OPRM1P35372 400 aa10.78□□□□□ -0.68
CIITA-212ENST00000618207 RRADP55042 308 aa10.78□□□□□ -0.68
CIITA-212ENST00000618207 SLC9A3R2Q15599 337 aa10.78□□□□□ -0.68
CIITA-212ENST00000618207 RNFT1Q5M7Z0 435 aa10.78□□□□□ -0.68
CIITA-212ENST00000618207 LY6G6FQ5SQ64 297 aa10.78□□□□□ -0.68
CIITA-212ENST00000618207 ALKAL2Q6UX46 152 aa10.78□□□□□ -0.68
CIITA-212ENST00000618207 NUFIP2Q7Z417 695 aaKnown RBP10.78□□□□□ -0.68
CIITA-212ENST00000618207 FER1L6-AS2Q96M78 137 aa10.78□□□□□ -0.68
CIITA-212ENST00000618207 FAAP24Q9BTP7 215 aa10.78□□□□□ -0.68
CIITA-212ENST00000618207 PECRQ9BY49 303 aa10.78□□□□□ -0.68
CIITA-212ENST00000618207 FAM86C1Q9NVL1 165 aa10.78□□□□□ -0.68
CIITA-212ENST00000618207 PTTG3PQ9NZH4 202 aa10.78□□□□□ -0.68
CIITA-212ENST00000618207 ESPL1Q14674 2120 aa10.78□□□□□ -0.68
CIITA-212ENST00000618207 OR6C6A6NF89 314 aa10.78□□□□□ -0.68
CIITA-212ENST00000618207 MCRIP1C9JLW8 97 aa10.78□□□□□ -0.68
CIITA-212ENST00000618207 C3orf80F5H4A9 247 aa10.78□□□□□ -0.68
CIITA-212ENST00000618207 WISP2O76076 250 aa10.78□□□□□ -0.68
CIITA-212ENST00000618207 EDN3P14138 238 aa10.78□□□□□ -0.68
CIITA-212ENST00000618207 SELLP14151 372 aa10.78□□□□□ -0.68
CIITA-212ENST00000618207 GSK3AP49840 483 aa10.78□□□□□ -0.68
CIITA-212ENST00000618207 SEC61A1P61619 476 aaKnown RBP10.78□□□□□ -0.68
CIITA-212ENST00000618207 HLXQ14774 488 aaPredicted RBP10.78□□□□□ -0.68
CIITA-212ENST00000618207 PLCXD3Q63HM9 321 aa10.78□□□□□ -0.68
CIITA-212ENST00000618207 CCDC36Q8IYA8 594 aa10.78□□□□□ -0.68
CIITA-212ENST00000618207 ZNF100Q8IYN0 542 aa10.78□□□□□ -0.68
CIITA-212ENST00000618207 OR5H2Q8NGV7 314 aa10.78□□□□□ -0.68
CIITA-212ENST00000618207 EHFQ9NZC4 300 aa10.78□□□□□ -0.68
CIITA-212ENST00000618207 IGKV1D-8A0A087WSZ0 117 aa10.77□□□□□ -0.68
CIITA-212ENST00000618207 A0A1W2PR80 420 aa10.77□□□□□ -0.68
CIITA-212ENST00000618207 GSTP1P09211 210 aaKnown RBP10.77□□□□□ -0.68
CIITA-212ENST00000618207 ZNF708P17019 499 aa10.77□□□□□ -0.68
CIITA-212ENST00000618207 FAM3AP98173 230 aa10.77□□□□□ -0.68
CIITA-212ENST00000618207 PIGYQ3MUY2 71 aa10.77□□□□□ -0.68
CIITA-212ENST00000618207 MBD2Q9UBB5 411 aa10.77□□□□□ -0.68
CIITA-212ENST00000618207 TNRC6AQ8NDV7 1962 aaKnown RBP10.77□□□□□ -0.69
CIITA-212ENST00000618207 ZNF850A8MQ14 1090 aa10.77□□□□□ -0.69
CIITA-212ENST00000618207 SCO1O75880 301 aa10.77□□□□□ -0.69
CIITA-212ENST00000618207 SCGNO76038 276 aa10.77□□□□□ -0.69
CIITA-212ENST00000618207 SLC10A1Q14973 349 aa10.77□□□□□ -0.69
CIITA-212ENST00000618207 TMPRSS13Q9BYE2 586 aa10.77□□□□□ -0.69
CIITA-212ENST00000618207 B3GNT2Q9NY97 397 aa10.77□□□□□ -0.69
CIITA-212ENST00000618207 PRSS50Q9UI38 385 aa10.77□□□□□ -0.69
CIITA-212ENST00000618207 ZNF292O60281 2723 aa10.77□□□□□ -0.69
CIITA-212ENST00000618207 ARHGAP21Q5T5U3 1957 aa10.77□□□□□ -0.69
CIITA-212ENST00000618207 ICE1Q9Y2F5 2266 aa10.77□□□□□ -0.69
CIITA-212ENST00000618207 C9orf170A2RU37 121 aa10.76□□□□□ -0.69
CIITA-212ENST00000618207 C5orf51A6NDU8 294 aa10.76□□□□□ -0.69
CIITA-212ENST00000618207 KLRC4-KLRK1H3BQV0 150 aa10.76□□□□□ -0.69
CIITA-212ENST00000618207 TSPAN4O14817 238 aa10.76□□□□□ -0.69
CIITA-212ENST00000618207 KNG1P01042 644 aa10.76□□□□□ -0.69
CIITA-212ENST00000618207 MMP7P09237 267 aaPredicted RBP10.76□□□□□ -0.69
CIITA-212ENST00000618207 FTH1P19P0C7X4 201 aa10.76□□□□□ -0.69
CIITA-212ENST00000618207 UBBP0CG47 229 aa10.76□□□□□ -0.69
CIITA-212ENST00000618207 RBP2P50120 134 aa10.76□□□□□ -0.69
CIITA-212ENST00000618207 IGFBP7Q16270 282 aa10.76□□□□□ -0.69
CIITA-212ENST00000618207 RIPPLY2Q5TAB7 128 aa10.76□□□□□ -0.69
CIITA-212ENST00000618207 APH1AQ96BI3 265 aa10.76□□□□□ -0.69
CIITA-212ENST00000618207 FBLN5Q9UBX5 448 aa10.76□□□□□ -0.69
CIITA-212ENST00000618207 MUC6Q6W4X9 2439 aa10.76□□□□□ -0.69
CIITA-212ENST00000618207 SPDEFO95238 335 aa10.76□□□□□ -0.69
CIITA-212ENST00000618207 NGFP01138 241 aa10.76□□□□□ -0.69
CIITA-212ENST00000618207 SFTPBP07988 381 aa10.76□□□□□ -0.69
CIITA-212ENST00000618207 CD46P15529 392 aa10.76□□□□□ -0.69
CIITA-212ENST00000618207 CPT2P23786 658 aa10.76□□□□□ -0.69
CIITA-212ENST00000618207 PCBD1P61457 104 aa10.76□□□□□ -0.69
CIITA-212ENST00000618207 LYG2Q86SG7 212 aa10.76□□□□□ -0.69
CIITA-212ENST00000618207 SLC25A42Q86VD7 318 aa10.76□□□□□ -0.69
CIITA-212ENST00000618207 GCNT2Q8N0V5 402 aa10.76□□□□□ -0.69
CIITA-212ENST00000618207 SUMF1Q8NBK3 374 aa10.76□□□□□ -0.69
CIITA-212ENST00000618207 TERB2Q8NHR7 220 aa10.76□□□□□ -0.69
CIITA-212ENST00000618207 PAPOLGQ9BWT3 736 aaKnown RBP10.76□□□□□ -0.69
CIITA-212ENST00000618207 C1QTNF6Q9BXI9 259 aa10.76□□□□□ -0.69
CIITA-212ENST00000618207 MFFQ9GZY8 342 aa10.76□□□□□ -0.69
CIITA-212ENST00000618207 ALX4Q9H161 411 aaPredicted RBP10.76□□□□□ -0.69
CIITA-212ENST00000618207 PPP1R14DQ9NXH3 145 aa10.76□□□□□ -0.69
CIITA-212ENST00000618207 CRIM1Q9NZV1 1036 aa10.76□□□□□ -0.69
CIITA-212ENST00000618207 UBQLN2Q9UHD9 624 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms