RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 HSPB6O14558 160 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 GEMIN2O14893 280 aaKnown RBP6.7□□□□□ -1.34
NEK3-207ENST00000617054 CYB5AP00167 134 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 AMY2AP04746 511 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 GSTT2BP0CG30 244 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 NAT2P11245 290 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 RAB6AP20340 208 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 BMP5P22003 454 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 RCVRNP35243 200 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 HRH1P35367 487 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 ZP1P60852 638 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 PRDX4Q13162 271 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 GUSBP1Q15486 140 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 OR8B8Q15620 311 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 INO80CQ6PI98 192 aaPredicted RBP6.7□□□□□ -1.34
NEK3-207ENST00000617054 SLC25A26Q70HW3 274 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 BTN2A1Q7KYR7 527 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 GPR137Q96N19 417 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 SLC6A7Q99884 636 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 FAAP24Q9BTP7 215 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 TMEM165Q9HC07 324 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 ZNF221Q9UK13 617 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 NUBP2Q9Y5Y2 271 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 DCHS2Q6V1P9 2916 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 ZNF816-ZNF321PA0A0X1KG74 233 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 AHRRA9YTQ3 701 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 ZNF736B4DX44 427 aaPredicted RBP6.7□□□□□ -1.34
NEK3-207ENST00000617054 CDK2AP1O14519 115 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 XRCC2O43543 280 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 RAB3DO95716 219 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 DHFRP00374 187 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 CSTBP04080 98 aaKnown RBP6.7□□□□□ -1.34
NEK3-207ENST00000617054 ZNF14P17017 642 aaPredicted RBP6.7□□□□□ -1.34
NEK3-207ENST00000617054 AP3S2P59780 193 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 MRPS10P82664 201 aaKnown RBP6.7□□□□□ -1.34
NEK3-207ENST00000617054 MALLQ13021 153 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 ARFRP1Q13795 201 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 TMED4Q7Z7H5 227 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 OR11H7Q8NGC8 314 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 HPSE2Q8WWQ2 592 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 AKAP1Q92667 903 aaKnown RBP eCLIP6.7□□□□□ -1.34
NEK3-207ENST00000617054 SLAMF9Q96A28 289 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 APOBEC3DQ96AK3 386 aaPredicted RBP6.7□□□□□ -1.34
NEK3-207ENST00000617054 GHITMQ9H3K2 345 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 ASF1BQ9NVP2 202 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 ING3Q9NXR8 418 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 ZNF222Q9UK12 451 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 PLCE1Q9P212 2302 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 ASH1LQ9NR48 2969 aaKnown RBP6.7□□□□□ -1.34
NEK3-207ENST00000617054 CD300LBA8K4G0 201 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 SDCBPO00560 298 aaPredicted RBP6.7□□□□□ -1.34
NEK3-207ENST00000617054 WDR1O75083 606 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 AKAIN1P0CW23 69 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 GNG2P59768 71 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 RRAS2P62070 204 aaPredicted RBP6.7□□□□□ -1.34
NEK3-207ENST00000617054 RPS27AP62979 156 aaKnown RBP6.7□□□□□ -1.34
NEK3-207ENST00000617054 TGFBR3Q03167 851 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 HACD4Q5VWC8 232 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 NSUN5P2Q63ZY6 315 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 SIGIRRQ6IA17 410 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 ZNF474Q6S9Z5 364 aaPredicted RBP6.7□□□□□ -1.34
NEK3-207ENST00000617054 FAM180AQ6UWF9 173 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 IDO2Q6ZQW0 420 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 Q6ZSR3 168 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 FBXL14Q8N1E6 418 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 ZNF611Q8N823 705 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 SNAPC3Q92966 411 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 SPSB4Q96A44 273 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 SNRNP40Q96DI7 357 aaKnown RBP6.7□□□□□ -1.34
NEK3-207ENST00000617054 PLSCR3Q9NRY6 295 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 KCNN3Q9UGI6 736 aa6.7□□□□□ -1.34
NEK3-207ENST00000617054 DIDO1Q9BTC0 2240 aaKnown RBP6.69□□□□□ -1.34
NEK3-207ENST00000617054 ZNF732B4DXR9 585 aa6.69□□□□□ -1.34
NEK3-207ENST00000617054 B9A039 149 aa6.69□□□□□ -1.34
NEK3-207ENST00000617054 RRP8O43159 456 aaKnown RBP6.69□□□□□ -1.34
NEK3-207ENST00000617054 SSNA1O43805 119 aa6.69□□□□□ -1.34
NEK3-207ENST00000617054 CSF1P09603 554 aa6.69□□□□□ -1.34
NEK3-207ENST00000617054 HIST1H1DP16402 221 aaKnown RBP6.69□□□□□ -1.34
NEK3-207ENST00000617054 PDZK1IP1Q13113 114 aa6.69□□□□□ -1.34
NEK3-207ENST00000617054 CNN3Q15417 329 aaKnown RBP6.69□□□□□ -1.34
NEK3-207ENST00000617054 KCNJ8Q15842 424 aa6.69□□□□□ -1.34
NEK3-207ENST00000617054 TMEM42Q69YG0 159 aa6.69□□□□□ -1.34
NEK3-207ENST00000617054 BPIFB2Q8N4F0 458 aa6.69□□□□□ -1.34
NEK3-207ENST00000617054 WDR31Q8NA23 367 aa6.69□□□□□ -1.34
NEK3-207ENST00000617054 FBXW5Q969U6 566 aa6.69□□□□□ -1.34
NEK3-207ENST00000617054 PTX4Q96A99 478 aa6.69□□□□□ -1.34
NEK3-207ENST00000617054 PPP1R14BQ96C90 147 aa6.69□□□□□ -1.34
NEK3-207ENST00000617054 CHIAQ9BZP6 476 aa6.69□□□□□ -1.34
NEK3-207ENST00000617054 CST11Q9H112 138 aa6.69□□□□□ -1.34
NEK3-207ENST00000617054 MED28Q9H204 178 aa6.69□□□□□ -1.34
NEK3-207ENST00000617054 OR51J1Q9H342 316 aa6.69□□□□□ -1.34
NEK3-207ENST00000617054 IFT46Q9NQC8 304 aa6.69□□□□□ -1.34
NEK3-207ENST00000617054 ZNF701Q9NV72 531 aaPredicted RBP6.69□□□□□ -1.34
NEK3-207ENST00000617054 PLEKHJ1Q9NW61 149 aa6.69□□□□□ -1.34
NEK3-207ENST00000617054 PROCRQ9UNN8 238 aa6.69□□□□□ -1.34
NEK3-207ENST00000617054 SLC7A11Q9UPY5 501 aa6.69□□□□□ -1.34
NEK3-207ENST00000617054 TACC2O95359 2948 aa6.69□□□□□ -1.34
NEK3-207ENST00000617054 IGKV1D-8A0A087WSZ0 117 aa6.69□□□□□ -1.34
NEK3-207ENST00000617054 UBE2QL1A1L167 161 aa6.69□□□□□ -1.34
NEK3-207ENST00000617054 C1QTNF9BB2RNN3 333 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms