RNA–Protein interactions for RNA: ENST00000613988.4

CBWD1-223, Transcript of COBW domain containing 1, human

TSL 2

Gene CBWD1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-223	ENST00000613988		H0YL77	283 aa		18.22	■□□□□ 0.51
CBWD1-223	ENST00000613988	ZNF12	P17014	697 aa		18.22	■□□□□ 0.51
CBWD1-223	ENST00000613988	SDC2	P34741	201 aa		18.22	■□□□□ 0.51
CBWD1-223	ENST00000613988	CX3CR1	P49238	355 aa		18.22	■□□□□ 0.51
CBWD1-223	ENST00000613988	RORC	P51449	518 aa		18.22	■□□□□ 0.51
CBWD1-223	ENST00000613988	INSL4	Q14641	139 aa		18.22	■□□□□ 0.51
CBWD1-223	ENST00000613988	OR13C5	Q8NGS8	318 aa		18.22	■□□□□ 0.51
CBWD1-223	ENST00000613988	DVL3	Q92997	716 aa	Predicted RBP	18.22	■□□□□ 0.51
CBWD1-223	ENST00000613988	SLC25A46	Q96AG3	418 aa		18.22	■□□□□ 0.51
CBWD1-223	ENST00000613988	SLC30A2	Q9BRI3	323 aa		18.22	■□□□□ 0.51
CBWD1-223	ENST00000613988	MRI1	Q9BV20	369 aa		18.22	■□□□□ 0.51
CBWD1-223	ENST00000613988	C1QTNF5	Q9BXJ0	243 aa		18.22	■□□□□ 0.51
CBWD1-223	ENST00000613988	PBOV1	Q9GZY1	135 aa		18.22	■□□□□ 0.51
CBWD1-223	ENST00000613988	SP140L	Q9H930	580 aa		18.22	■□□□□ 0.51
CBWD1-223	ENST00000613988	ESM1	Q9NQ30	184 aa		18.22	■□□□□ 0.51
CBWD1-223	ENST00000613988	TMEM100	Q9NV29	134 aa		18.22	■□□□□ 0.51
CBWD1-223	ENST00000613988	SLC22A13	Q9Y226	551 aa		18.22	■□□□□ 0.51
CBWD1-223	ENST00000613988	INSIG2	Q9Y5U4	225 aa		18.22	■□□□□ 0.51
CBWD1-223	ENST00000613988	CEACAM18	A8MTB9	384 aa		18.21	■□□□□ 0.51
CBWD1-223	ENST00000613988	IQCF6	A8MYZ5	107 aa		18.21	■□□□□ 0.51
CBWD1-223	ENST00000613988	ZNF205	O95201	554 aa		18.21	■□□□□ 0.51
CBWD1-223	ENST00000613988	CYB5R3	P00387	301 aa	Predicted RBP	18.21	■□□□□ 0.51
CBWD1-223	ENST00000613988	OCM2	P0CE71	109 aa		18.21	■□□□□ 0.51
CBWD1-223	ENST00000613988	SELE	P16581	610 aa		18.21	■□□□□ 0.51
CBWD1-223	ENST00000613988	CALR	P27797	417 aa	Known RBP	18.21	■□□□□ 0.51
CBWD1-223	ENST00000613988	KRTAP27-1	Q3LI81	207 aa		18.21	■□□□□ 0.51
CBWD1-223	ENST00000613988	DRAM2	Q6UX65	266 aa		18.21	■□□□□ 0.51
CBWD1-223	ENST00000613988	RBMS3	Q6XE24	437 aa	Known RBP	18.21	■□□□□ 0.51
CBWD1-223	ENST00000613988	COLCA1	Q6ZS62	124 aa		18.21	■□□□□ 0.51
CBWD1-223	ENST00000613988	ZDHHC22	Q8N966	263 aa		18.21	■□□□□ 0.51
CBWD1-223	ENST00000613988	DERL3	Q96Q80	235 aa		18.21	■□□□□ 0.51
CBWD1-223	ENST00000613988	OR14A2	Q96R54	314 aa		18.21	■□□□□ 0.51
CBWD1-223	ENST00000613988	NXF2	Q9GZY0	626 aa	Known RBP	18.21	■□□□□ 0.51
CBWD1-223	ENST00000613988	MMP27	Q9H306	513 aa		18.21	■□□□□ 0.51
CBWD1-223	ENST00000613988	TMEM165	Q9HC07	324 aa		18.21	■□□□□ 0.51
CBWD1-223	ENST00000613988	OR5V1	Q9UGF6	321 aa		18.21	■□□□□ 0.51
CBWD1-223	ENST00000613988	NUP50	Q9UKX7	468 aa		18.21	■□□□□ 0.51
CBWD1-223	ENST00000613988	HHLA2	Q9UM44	414 aa		18.21	■□□□□ 0.51
CBWD1-223	ENST00000613988	IGHV3-64D	A0A0J9YX35	117 aa		18.2	■□□□□ 0.5
CBWD1-223	ENST00000613988		A8MXK9	166 aa		18.2	■□□□□ 0.5
CBWD1-223	ENST00000613988		F5H5P2	479 aa		18.2	■□□□□ 0.5
CBWD1-223	ENST00000613988	MLNR	O43193	412 aa		18.2	■□□□□ 0.5
CBWD1-223	ENST00000613988	WNT2	P09544	360 aa		18.2	■□□□□ 0.5
CBWD1-223	ENST00000613988	ACSM4	P0C7M7	580 aa		18.2	■□□□□ 0.5
CBWD1-223	ENST00000613988	PRKX	P51817	358 aa		18.2	■□□□□ 0.5
CBWD1-223	ENST00000613988	TPTE	P56180	551 aa		18.2	■□□□□ 0.5
CBWD1-223	ENST00000613988	ZNF121	P58317	390 aa	Predicted RBP	18.2	■□□□□ 0.5
CBWD1-223	ENST00000613988	ZNF404	Q494X3	552 aa		18.2	■□□□□ 0.5
CBWD1-223	ENST00000613988	HSD17B12	Q53GQ0	312 aa		18.2	■□□□□ 0.5
CBWD1-223	ENST00000613988	MOGAT3	Q86VF5	341 aa		18.2	■□□□□ 0.5
CBWD1-223	ENST00000613988	CROCCP3	Q8IVE0	287 aa		18.2	■□□□□ 0.5
CBWD1-223	ENST00000613988	SNTG1	Q9NSN8	517 aa		18.2	■□□□□ 0.5
CBWD1-223	ENST00000613988	PPIAL4A	Q9Y536	164 aa		18.2	■□□□□ 0.5
CBWD1-223	ENST00000613988	TRBV5-7	A0A0A0MS05	114 aa		18.19	■□□□□ 0.5
CBWD1-223	ENST00000613988	LRRC30	A6NM36	301 aa		18.19	■□□□□ 0.5
CBWD1-223	ENST00000613988		M0R135	149 aa		18.19	■□□□□ 0.5
CBWD1-223	ENST00000613988	TTR	P02766	147 aa		18.19	■□□□□ 0.5
CBWD1-223	ENST00000613988	LCAT	P04180	440 aa		18.19	■□□□□ 0.5
CBWD1-223	ENST00000613988	MALL	Q13021	153 aa		18.19	■□□□□ 0.5
CBWD1-223	ENST00000613988	NAA40	Q86UY6	237 aa		18.19	■□□□□ 0.5
CBWD1-223	ENST00000613988	MCFD2	Q8NI22	146 aa		18.19	■□□□□ 0.5
CBWD1-223	ENST00000613988	ZNF799	Q96GE5	643 aa		18.19	■□□□□ 0.5
CBWD1-223	ENST00000613988	PPIL3	Q9H2H8	161 aa	Known RBP	18.19	■□□□□ 0.5
CBWD1-223	ENST00000613988		A0A075B6Q4	140 aa		18.18	■□□□□ 0.5
CBWD1-223	ENST00000613988	CD2	P06729	351 aa		18.18	■□□□□ 0.5
CBWD1-223	ENST00000613988	RPS2	P15880	293 aa	Known RBP	18.18	■□□□□ 0.5
CBWD1-223	ENST00000613988	CFL1	P23528	166 aa	Known RBP	18.18	■□□□□ 0.5
CBWD1-223	ENST00000613988	CPT2	P23786	658 aa		18.18	■□□□□ 0.5
CBWD1-223	ENST00000613988	PRSS12	P56730	875 aa		18.18	■□□□□ 0.5
CBWD1-223	ENST00000613988	UBA52	P62987	128 aa	Known RBP	18.18	■□□□□ 0.5
CBWD1-223	ENST00000613988	GK2	Q14410	553 aa	Predicted RBP	18.18	■□□□□ 0.5
CBWD1-223	ENST00000613988	PRSS45	Q7RTY3	260 aa		18.18	■□□□□ 0.5
CBWD1-223	ENST00000613988	RDH10	Q8IZV5	341 aa		18.18	■□□□□ 0.5
CBWD1-223	ENST00000613988	SIGLECL1	Q8N7X8	197 aa		18.18	■□□□□ 0.5
CBWD1-223	ENST00000613988	CCDC54	Q8NEL0	328 aa		18.18	■□□□□ 0.5
CBWD1-223	ENST00000613988	OR52H1	Q8NGJ2	320 aa		18.18	■□□□□ 0.5
CBWD1-223	ENST00000613988	TSEN15	Q8WW01	171 aa	Known RBP	18.18	■□□□□ 0.5
CBWD1-223	ENST00000613988	SSBP3	Q9BWW4	388 aa	Predicted RBP	18.18	■□□□□ 0.5
CBWD1-223	ENST00000613988	SLITRK2	Q9H156	845 aa		18.18	■□□□□ 0.5
CBWD1-223	ENST00000613988	NOX4	Q9NPH5	578 aa		18.18	■□□□□ 0.5
CBWD1-223	ENST00000613988	ZNF69	Q9UC07	566 aa		18.18	■□□□□ 0.5
CBWD1-223	ENST00000613988	MIOX	Q9UGB7	285 aa		18.18	■□□□□ 0.5
CBWD1-223	ENST00000613988	DHDH	Q9UQ10	334 aa		18.18	■□□□□ 0.5
CBWD1-223	ENST00000613988		A0A0U1RQV5	110 aa		18.17	■□□□□ 0.5
CBWD1-223	ENST00000613988	LOC107986453	A0A1B0GWG9	222 aa		18.17	■□□□□ 0.5
CBWD1-223	ENST00000613988	ANXA2	P07355	339 aa	Known RBP	18.17	■□□□□ 0.5
CBWD1-223	ENST00000613988	MXD1	Q05195	221 aa		18.17	■□□□□ 0.5
CBWD1-223	ENST00000613988	ZNF181	Q2M3W8	571 aa		18.17	■□□□□ 0.5
CBWD1-223	ENST00000613988	KLF17	Q5JT82	389 aa	Predicted RBP	18.17	■□□□□ 0.5
CBWD1-223	ENST00000613988	FAM27D1	Q5T7N8	215 aa		18.17	■□□□□ 0.5
CBWD1-223	ENST00000613988	C1orf87	Q8N0U7	546 aa		18.17	■□□□□ 0.5
CBWD1-223	ENST00000613988	TBC1D15	Q8TC07	691 aa		18.17	■□□□□ 0.5
CBWD1-223	ENST00000613988	AP3S1	Q92572	193 aa		18.17	■□□□□ 0.5
CBWD1-223	ENST00000613988	PPP1R14A	Q96A00	147 aa		18.17	■□□□□ 0.5
CBWD1-223	ENST00000613988	PGAM5	Q96HS1	289 aa		18.17	■□□□□ 0.5
CBWD1-223	ENST00000613988	BRD7	Q9NPI1	651 aa		18.17	■□□□□ 0.5
CBWD1-223	ENST00000613988		A0A1B0GVI7	797 aa		18.17	■□□□□ 0.5
CBWD1-223	ENST00000613988		A0A1B0GWJ7	208 aa		18.17	■□□□□ 0.5
CBWD1-223	ENST00000613988	SHISA3	A0PJX4	238 aa		18.17	■□□□□ 0.5
CBWD1-223	ENST00000613988	PDCD5	O14737	125 aa		18.17	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 39 ms