RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 TGFBR3LH3BV60 316 aa9.61□□□□□ -0.87
FAM3A-221ENST00000612856 MBP02144 154 aa9.61□□□□□ -0.87
FAM3A-221ENST00000612856 CELA3AP09093 270 aa9.61□□□□□ -0.87
FAM3A-221ENST00000612856 CEACAM1P13688 526 aa9.61□□□□□ -0.87
FAM3A-221ENST00000612856 PI3P19957 117 aa9.61□□□□□ -0.87
FAM3A-221ENST00000612856 HNF4GQ14541 408 aa9.61□□□□□ -0.87
FAM3A-221ENST00000612856 ZNF528Q3MIS6 628 aa9.61□□□□□ -0.87
FAM3A-221ENST00000612856 ZNF721Q8TF20 911 aa9.61□□□□□ -0.87
FAM3A-221ENST00000612856 PHF3Q92576 2039 aaKnown RBP9.61□□□□□ -0.87
FAM3A-221ENST00000612856 ACTL6AO96019 429 aa9.61□□□□□ -0.87
FAM3A-221ENST00000612856 C11orf87Q6NUJ2 197 aa9.61□□□□□ -0.87
FAM3A-221ENST00000612856 C15orf40Q8WUR7 153 aa9.61□□□□□ -0.87
FAM3A-221ENST00000612856 ABHD17AQ96GS6 310 aa9.61□□□□□ -0.87
FAM3A-221ENST00000612856 TMPRSS5Q9H3S3 457 aa9.61□□□□□ -0.87
FAM3A-221ENST00000612856 NPDC1Q9NQX5 325 aaPredicted RBP9.61□□□□□ -0.87
FAM3A-221ENST00000612856 MRPL22Q9NWU5 206 aaKnown RBP9.61□□□□□ -0.87
FAM3A-221ENST00000612856 GAR1Q9NY12 217 aaKnown RBP9.61□□□□□ -0.87
FAM3A-221ENST00000612856 C21orf140B9A014 251 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 CCL21O00585 134 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 NME2P1O60361 137 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 OR2F2O95006 317 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 PCP4P48539 62 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 OR2F1Q13607 317 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 OR8B8Q15620 311 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 RFLNBQ8N5W9 214 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 OR4S1Q8NGB4 309 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 TICRRQ7Z2Z1 1910 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 A0A087WZY1 265 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 TMEM235A6NFC5 223 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 TNFSF12O43508 249 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 ZIC2O95409 532 aaPredicted RBP9.6□□□□□ -0.87
FAM3A-221ENST00000612856 EPPINO95925 133 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 RAB40ALP0C0E4 278 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 CPN1P15169 458 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 AMY2BP19961 511 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 FUT7Q11130 342 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 RAB11BQ15907 218 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 ZNF74Q16587 644 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 OR2A2Q6IF42 318 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 RAB40AQ8WXH6 277 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 SLAMF6Q96DU3 332 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 URM1Q9BTM9 101 aaKnown RBP9.6□□□□□ -0.87
FAM3A-221ENST00000612856 B3GALT5Q9Y2C3 310 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.6□□□□□ -0.87
FAM3A-221ENST00000612856 LOC102725191A0A1B0GVB3 256 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 A0A1W2PPE3 182 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 PRSS37A4D1T9 235 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 B4E171 279 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 CDX4O14627 284 aaPredicted RBP9.6□□□□□ -0.87
FAM3A-221ENST00000612856 PPP1R2P9O14990 202 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 SPRY3O43610 288 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 CLN5O75503 358 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 CRYABP02511 175 aaKnown RBP9.6□□□□□ -0.87
FAM3A-221ENST00000612856 RFPL3SP0C7P2 107 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 CTLA4P16410 223 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 NDUFB7P17568 137 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 TSPAN7P41732 249 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 CAMLGP49069 296 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 HERV-K104P61576 105 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 RHEBQ15382 184 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 TMEM251Q8N6I4 163 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 GJC3Q8NFK1 279 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 TM4SF19Q96DZ7 209 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 SIGLEC12Q96PQ1 595 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 WDR13Q9H1Z4 485 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 MED9Q9NWA0 146 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 ABCA12Q86UK0 2595 aa9.6□□□□□ -0.87
FAM3A-221ENST00000612856 A0A0B4J2E0 115 aa9.59□□□□□ -0.87
FAM3A-221ENST00000612856 A0A1B0GX12 115 aa9.59□□□□□ -0.87
FAM3A-221ENST00000612856 M0R135 149 aa9.59□□□□□ -0.87
FAM3A-221ENST00000612856 GPR37O15354 613 aa9.59□□□□□ -0.87
FAM3A-221ENST00000612856 ANGPTL7O43827 346 aa9.59□□□□□ -0.87
FAM3A-221ENST00000612856 LRP3O75074 770 aa9.59□□□□□ -0.87
FAM3A-221ENST00000612856 IGHV3-13P01766 116 aa9.59□□□□□ -0.87
FAM3A-221ENST00000612856 IGHV3-7P01780 117 aa9.59□□□□□ -0.87
FAM3A-221ENST00000612856 FABP4P15090 132 aa9.59□□□□□ -0.87
FAM3A-221ENST00000612856 MST1P26927 711 aa9.59□□□□□ -0.87
FAM3A-221ENST00000612856 MECP2P51608 486 aaKnown RBP9.59□□□□□ -0.87
FAM3A-221ENST00000612856 MRPS10P82664 201 aaKnown RBP9.59□□□□□ -0.87
FAM3A-221ENST00000612856 CHRFAM7AQ494W8 412 aa9.59□□□□□ -0.87
FAM3A-221ENST00000612856 LRP11Q86VZ4 500 aa9.59□□□□□ -0.87
FAM3A-221ENST00000612856 OR5D14Q8NGL3 314 aa9.59□□□□□ -0.87
FAM3A-221ENST00000612856 RDH5Q92781 318 aa9.59□□□□□ -0.87
FAM3A-221ENST00000612856 ZNF799Q96GE5 643 aa9.59□□□□□ -0.87
FAM3A-221ENST00000612856 CST11Q9H112 138 aa9.59□□□□□ -0.87
FAM3A-221ENST00000612856 OR5V1Q9UGF6 321 aa9.59□□□□□ -0.87
FAM3A-221ENST00000612856 PIGLQ9Y2B2 252 aa9.59□□□□□ -0.87
FAM3A-221ENST00000612856 FRYLO94915 3013 aa9.59□□□□□ -0.87
FAM3A-221ENST00000612856 KIAA2026Q5HYC2 2103 aa9.59□□□□□ -0.87
FAM3A-221ENST00000612856 A0A0A6YYH2 397 aa9.59□□□□□ -0.87
FAM3A-221ENST00000612856 A0A1W2PPE2 198 aa9.59□□□□□ -0.87
FAM3A-221ENST00000612856 A6NJ64 397 aa9.59□□□□□ -0.87
FAM3A-221ENST00000612856 RAB27BO00194 218 aa9.59□□□□□ -0.87
FAM3A-221ENST00000612856 HS3ST1O14792 307 aa9.59□□□□□ -0.87
FAM3A-221ENST00000612856 IL5P05113 134 aa9.59□□□□□ -0.87
FAM3A-221ENST00000612856 SP1P08047 785 aa9.59□□□□□ -0.87
FAM3A-221ENST00000612856 FGF5P12034 268 aa9.59□□□□□ -0.87
FAM3A-221ENST00000612856 GNRHRP30968 328 aa9.59□□□□□ -0.87
FAM3A-221ENST00000612856 ACTBP60709 375 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms