RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 KCNG3Q8TAE7 436 aa14.9□□□□□ -0.02
SREK1-216ENST00000612404 SLAMF9Q96A28 289 aa14.9□□□□□ -0.02
SREK1-216ENST00000612404 S100A16Q96FQ6 103 aaKnown RBP14.9□□□□□ -0.02
SREK1-216ENST00000612404 ATG5Q9H1Y0 275 aa14.9□□□□□ -0.02
SREK1-216ENST00000612404 RAB22AQ9UL26 194 aa14.9□□□□□ -0.02
SREK1-216ENST00000612404 IGKV1-12A0A0C4DH73 117 aa14.9□□□□□ -0.02
SREK1-216ENST00000612404 FABP12A6NFH5 140 aa14.9□□□□□ -0.02
SREK1-216ENST00000612404 M0R233 179 aa14.9□□□□□ -0.02
SREK1-216ENST00000612404 LDLRAD4O15165 306 aa14.9□□□□□ -0.02
SREK1-216ENST00000612404 SYNGR1O43759 233 aa14.9□□□□□ -0.02
SREK1-216ENST00000612404 HTR3BO95264 441 aa14.9□□□□□ -0.02
SREK1-216ENST00000612404 IGKV1D-12P01611 117 aa14.9□□□□□ -0.02
SREK1-216ENST00000612404 CSTBP04080 98 aaKnown RBP14.9□□□□□ -0.02
SREK1-216ENST00000612404 DAZAP2Q15038 168 aaPredicted RBP14.9□□□□□ -0.02
SREK1-216ENST00000612404 FAM76BQ5HYJ3 339 aa14.9□□□□□ -0.02
SREK1-216ENST00000612404 PRAMEF6Q5VXH4 476 aa14.9□□□□□ -0.02
SREK1-216ENST00000612404 FAM131AQ6UXB0 335 aa14.9□□□□□ -0.02
SREK1-216ENST00000612404 OR2W3Q7Z3T1 314 aa14.9□□□□□ -0.02
SREK1-216ENST00000612404 MKXQ8IYA7 352 aa14.9□□□□□ -0.02
SREK1-216ENST00000612404 MUC15Q8N387 334 aa14.9□□□□□ -0.02
SREK1-216ENST00000612404 MFSD4AQ8N468 514 aa14.9□□□□□ -0.02
SREK1-216ENST00000612404 PXT1Q8NFP0 134 aa14.9□□□□□ -0.02
SREK1-216ENST00000612404 ABCG5Q9H222 651 aa14.9□□□□□ -0.02
SREK1-216ENST00000612404 ZDHHC8Q9ULC8 765 aa14.9□□□□□ -0.02
SREK1-216ENST00000612404 HELZ2Q9BYK8 2649 aaKnown RBP14.9□□□□□ -0.02
SREK1-216ENST00000612404 A1L4Q6 167 aa14.89□□□□□ -0.03
SREK1-216ENST00000612404 A6NLC8 198 aa14.89□□□□□ -0.03
SREK1-216ENST00000612404 A6NNC1 897 aa14.89□□□□□ -0.03
SREK1-216ENST00000612404 TMEM14DPA8MWL7 114 aa14.89□□□□□ -0.03
SREK1-216ENST00000612404 B9A039 149 aa14.89□□□□□ -0.03
SREK1-216ENST00000612404 CDIPTO14735 213 aa14.89□□□□□ -0.03
SREK1-216ENST00000612404 KDM4BO94953 1096 aa14.89□□□□□ -0.03
SREK1-216ENST00000612404 INHBBP09529 407 aa14.89□□□□□ -0.03
SREK1-216ENST00000612404 FBXL14Q8N1E6 418 aa14.89□□□□□ -0.03
SREK1-216ENST00000612404 ZSCAN4Q8NAM6 433 aaPredicted RBP14.89□□□□□ -0.03
SREK1-216ENST00000612404 RAB40AQ8WXH6 277 aa14.89□□□□□ -0.03
SREK1-216ENST00000612404 FBXW5Q969U6 566 aa14.89□□□□□ -0.03
SREK1-216ENST00000612404 PHF21AQ96BD5 680 aa14.89□□□□□ -0.03
SREK1-216ENST00000612404 OR2V2Q96R30 315 aa14.89□□□□□ -0.03
SREK1-216ENST00000612404 TMEM59Q9BXS4 323 aa14.89□□□□□ -0.03
SREK1-216ENST00000612404 DYNLRB1Q9NP97 96 aa14.89□□□□□ -0.03
SREK1-216ENST00000612404 UFSP2Q9NUQ7 469 aa14.89□□□□□ -0.03
SREK1-216ENST00000612404 J3QT63 122 aa14.89□□□□□ -0.03
SREK1-216ENST00000612404 CDC14BO60729 498 aa14.89□□□□□ -0.03
SREK1-216ENST00000612404 CTAG2O75638 210 aa14.89□□□□□ -0.03
SREK1-216ENST00000612404 IGHV1-46P01743 117 aa14.89□□□□□ -0.03
SREK1-216ENST00000612404 MGMTP16455 207 aa14.89□□□□□ -0.03
SREK1-216ENST00000612404 RAB6AP20340 208 aa14.89□□□□□ -0.03
SREK1-216ENST00000612404 TNFSF4P23510 183 aa14.89□□□□□ -0.03
SREK1-216ENST00000612404 IL18Q14116 193 aa14.89□□□□□ -0.03
SREK1-216ENST00000612404 GPR176Q14439 515 aa14.89□□□□□ -0.03
SREK1-216ENST00000612404 ZNF846Q147U1 533 aa14.89□□□□□ -0.03
SREK1-216ENST00000612404 EFNB3Q15768 340 aa14.89□□□□□ -0.03
SREK1-216ENST00000612404 ASCL4Q6XD76 172 aa14.89□□□□□ -0.03
SREK1-216ENST00000612404 IZUMO1Q8IYV9 350 aa14.89□□□□□ -0.03
SREK1-216ENST00000612404 AQP3Q92482 292 aa14.89□□□□□ -0.03
SREK1-216ENST00000612404 PTX4Q96A99 478 aa14.89□□□□□ -0.03
SREK1-216ENST00000612404 WDR12Q9GZL7 423 aaKnown RBP14.89□□□□□ -0.03
SREK1-216ENST00000612404 FBLN5Q9UBX5 448 aa14.89□□□□□ -0.03
SREK1-216ENST00000612404 V9GYH0 126 aa14.89□□□□□ -0.03
SREK1-216ENST00000612404 CRYBG3Q68DQ2 2970 aa14.88□□□□□ -0.03
SREK1-216ENST00000612404 TRAPPC2LH3BP13 241 aa14.88□□□□□ -0.03
SREK1-216ENST00000612404 ZNF780AO75290 641 aaPredicted RBP14.88□□□□□ -0.03
SREK1-216ENST00000612404 RHBDL1O75783 438 aa14.88□□□□□ -0.03
SREK1-216ENST00000612404 SFTPBP07988 381 aa14.88□□□□□ -0.03
SREK1-216ENST00000612404 ETV6P41212 452 aa14.88□□□□□ -0.03
SREK1-216ENST00000612404 NPBWR2P48146 333 aa14.88□□□□□ -0.03
SREK1-216ENST00000612404 TNFAIP6P98066 277 aaPredicted RBP14.88□□□□□ -0.03
SREK1-216ENST00000612404 ZNF45Q02386 682 aa14.88□□□□□ -0.03
SREK1-216ENST00000612404 IL24Q13007 206 aa14.88□□□□□ -0.03
SREK1-216ENST00000612404 MPPED2Q15777 294 aa14.88□□□□□ -0.03
SREK1-216ENST00000612404 METAP1DQ6UB28 335 aaPredicted RBP14.88□□□□□ -0.03
SREK1-216ENST00000612404 SAXO1Q8IYX7 474 aa14.88□□□□□ -0.03
SREK1-216ENST00000612404 ZCCHC24Q8N2G6 241 aaKnown RBP14.88□□□□□ -0.03
SREK1-216ENST00000612404 PKIBQ9C010 78 aa14.88□□□□□ -0.03
SREK1-216ENST00000612404 SELENOIQ9C0D9 397 aa14.88□□□□□ -0.03
SREK1-216ENST00000612404 MTCH1Q9NZJ7 389 aa14.88□□□□□ -0.03
SREK1-216ENST00000612404 MRPS7Q9Y2R9 242 aaKnown RBP14.88□□□□□ -0.03
SREK1-216ENST00000612404 CACNA1DQ01668 2161 aa14.87□□□□□ -0.03
SREK1-216ENST00000612404 METTL21EPA6NDL7 271 aa14.87□□□□□ -0.03
SREK1-216ENST00000612404 BCL3P20749 454 aa14.87□□□□□ -0.03
SREK1-216ENST00000612404 CDK2P24941 298 aa14.87□□□□□ -0.03
SREK1-216ENST00000612404 MPZP25189 248 aa14.87□□□□□ -0.03
SREK1-216ENST00000612404 CD200P41217 278 aa14.87□□□□□ -0.03
SREK1-216ENST00000612404 SRP9P49458 86 aaKnown RBP14.87□□□□□ -0.03
SREK1-216ENST00000612404 MST1LQ2TV78 715 aa14.87□□□□□ -0.03
SREK1-216ENST00000612404 BIVMQ86UB2 503 aa14.87□□□□□ -0.03
SREK1-216ENST00000612404 ACBD4Q8NC06 268 aa14.87□□□□□ -0.03
SREK1-216ENST00000612404 ITLN1Q8WWA0 313 aa14.87□□□□□ -0.03
SREK1-216ENST00000612404 MEGF10Q96KG7 1140 aa14.87□□□□□ -0.03
SREK1-216ENST00000612404 ZNF488Q96MN9 340 aa14.87□□□□□ -0.03
SREK1-216ENST00000612404 SPOCK3Q9BQ16 436 aa14.87□□□□□ -0.03
SREK1-216ENST00000612404 PCDHB16Q9NRJ7 776 aa14.87□□□□□ -0.03
SREK1-216ENST00000612404 POLDIP2Q9Y2S7 368 aa14.87□□□□□ -0.03
SREK1-216ENST00000612404 C17orf100A8MU93 164 aa14.87□□□□□ -0.03
SREK1-216ENST00000612404 VGLL3A8MV65 326 aa14.87□□□□□ -0.03
SREK1-216ENST00000612404 TPD52L2O43399 206 aaKnown RBP14.87□□□□□ -0.03
SREK1-216ENST00000612404 CLDN1O95832 211 aa14.87□□□□□ -0.03
SREK1-216ENST00000612404 GTF2F2P13984 249 aa14.87□□□□□ -0.03
SREK1-216ENST00000612404 TMEM69Q5SWH9 247 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms