RNA–Protein interactions for RNA: ENST00000612341.4

SMTN-222, Transcript of smoothelin, human

APPRIS ALT2 TSL 2 BASIC

Gene SMTN, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-222	ENST00000612341	CALCR	P30988	508 aa		11.29	□□□□□ -0.6
SMTN-222	ENST00000612341	NTF4	P34130	210 aa		11.29	□□□□□ -0.6
SMTN-222	ENST00000612341	MTCP1	P56278	107 aa		11.29	□□□□□ -0.6
SMTN-222	ENST00000612341	TAF9	Q16594	264 aa		11.29	□□□□□ -0.6
SMTN-222	ENST00000612341	MAML2	Q8IZL2	1156 aa	Predicted RBP	11.29	□□□□□ -0.6
SMTN-222	ENST00000612341	NABP1	Q96AH0	204 aa		11.29	□□□□□ -0.6
SMTN-222	ENST00000612341	PLEKHJ1	Q9NW61	149 aa		11.29	□□□□□ -0.6
SMTN-222	ENST00000612341	GHRL	Q9UBU3	117 aa		11.29	□□□□□ -0.6
SMTN-222	ENST00000612341	NXT1	Q9UKK6	140 aa	Known RBP	11.29	□□□□□ -0.6
SMTN-222	ENST00000612341	GPR132	Q9UNW8	380 aa		11.29	□□□□□ -0.6
SMTN-222	ENST00000612341	TXNL1	O43396	289 aa		11.28	□□□□□ -0.6
SMTN-222	ENST00000612341	LCAT	P04180	440 aa		11.28	□□□□□ -0.6
SMTN-222	ENST00000612341	RFPL3S	P0C7P2	107 aa		11.28	□□□□□ -0.6
SMTN-222	ENST00000612341	SMIM6	P0DI80	62 aa		11.28	□□□□□ -0.6
SMTN-222	ENST00000612341	OPRM1	P35372	400 aa		11.28	□□□□□ -0.6
SMTN-222	ENST00000612341	RRAD	P55042	308 aa		11.28	□□□□□ -0.6
SMTN-222	ENST00000612341	DEFA6	Q01524	100 aa		11.28	□□□□□ -0.6
SMTN-222	ENST00000612341	SNTB1	Q13884	538 aa	Known RBP	11.28	□□□□□ -0.6
SMTN-222	ENST00000612341	SSPN	Q14714	243 aa		11.28	□□□□□ -0.6
SMTN-222	ENST00000612341	ANKRD55	Q3KP44	614 aa		11.28	□□□□□ -0.6
SMTN-222	ENST00000612341	RAB11FIP2	Q7L804	512 aa		11.28	□□□□□ -0.6
SMTN-222	ENST00000612341	ZIC4	Q8N9L1	334 aa		11.28	□□□□□ -0.6
SMTN-222	ENST00000612341	DYRK2	Q92630	601 aa		11.28	□□□□□ -0.6
SMTN-222	ENST00000612341	MRPS24	Q96EL2	167 aa	Known RBP	11.28	□□□□□ -0.6
SMTN-222	ENST00000612341	RRNAD1	Q96FB5	475 aa	Known RBP	11.28	□□□□□ -0.6
SMTN-222	ENST00000612341	MEGF10	Q96KG7	1140 aa		11.28	□□□□□ -0.6
SMTN-222	ENST00000612341	CXCL13	O43927	109 aa		11.28	□□□□□ -0.6
SMTN-222	ENST00000612341	ACKR3	P25106	362 aa		11.28	□□□□□ -0.6
SMTN-222	ENST00000612341	FOLR3	P41439	243 aa		11.28	□□□□□ -0.6
SMTN-222	ENST00000612341	LSM6	P62312	80 aa	Known RBP	11.28	□□□□□ -0.6
SMTN-222	ENST00000612341	EXT1	Q16394	746 aa		11.28	□□□□□ -0.6
SMTN-222	ENST00000612341	PAQR8	Q8TEZ7	354 aa		11.28	□□□□□ -0.6
SMTN-222	ENST00000612341	CDC6	Q99741	560 aa		11.28	□□□□□ -0.6
SMTN-222	ENST00000612341	PIGQ	Q9BRB3	760 aa		11.28	□□□□□ -0.6
SMTN-222	ENST00000612341	NAA11	Q9BSU3	229 aa	Predicted RBP	11.28	□□□□□ -0.6
SMTN-222	ENST00000612341	PECR	Q9BY49	303 aa		11.28	□□□□□ -0.6
SMTN-222	ENST00000612341	ANGPTL4	Q9BY76	406 aa		11.28	□□□□□ -0.6
SMTN-222	ENST00000612341	WDR54	Q9H977	334 aa		11.28	□□□□□ -0.6
SMTN-222	ENST00000612341	NDRG3	Q9UGV2	375 aa		11.28	□□□□□ -0.6
SMTN-222	ENST00000612341	CCDC187	A0A096LP49	1063 aa		11.27	□□□□□ -0.6
SMTN-222	ENST00000612341	MSGN1	A6NI15	193 aa		11.27	□□□□□ -0.6
SMTN-222	ENST00000612341		H0YIZ8	118 aa		11.27	□□□□□ -0.6
SMTN-222	ENST00000612341	SERPINA5	P05154	406 aa		11.27	□□□□□ -0.6
SMTN-222	ENST00000612341	SLC25A4	P12235	298 aa		11.27	□□□□□ -0.6
SMTN-222	ENST00000612341	ZNF84	P51523	738 aa		11.27	□□□□□ -0.6
SMTN-222	ENST00000612341	WIPI1	Q5MNZ9	446 aa	Predicted RBP	11.27	□□□□□ -0.6
SMTN-222	ENST00000612341	C9orf135	Q5VTT2	229 aa		11.27	□□□□□ -0.6
SMTN-222	ENST00000612341	CRIP3	Q6Q6R5	217 aa		11.27	□□□□□ -0.6
SMTN-222	ENST00000612341	OR2Y1	Q8NGV0	311 aa		11.27	□□□□□ -0.6
SMTN-222	ENST00000612341	OR51F2	Q8NH61	342 aa		11.27	□□□□□ -0.6
SMTN-222	ENST00000612341	WNT2B	Q93097	391 aa		11.27	□□□□□ -0.6
SMTN-222	ENST00000612341	SLC25A32	Q9H2D1	315 aa		11.27	□□□□□ -0.6
SMTN-222	ENST00000612341	MCTS1	Q9ULC4	181 aa	Known RBP	11.27	□□□□□ -0.6
SMTN-222	ENST00000612341	EP300	Q09472	2414 aa	Predicted RBP	11.27	□□□□□ -0.61
SMTN-222	ENST00000612341	LOC102723996	A0A087X1L8	192 aa		11.27	□□□□□ -0.61
SMTN-222	ENST00000612341	CCL1	P22362	96 aa		11.27	□□□□□ -0.61
SMTN-222	ENST00000612341	SUPT4H1	P63272	117 aa	Known RBP	11.27	□□□□□ -0.61
SMTN-222	ENST00000612341	KCNMB1	Q16558	191 aa		11.27	□□□□□ -0.61
SMTN-222	ENST00000612341	CBLN2	Q8IUK8	224 aa		11.27	□□□□□ -0.61
SMTN-222	ENST00000612341	TMEM123	Q8N131	208 aa		11.27	□□□□□ -0.61
SMTN-222	ENST00000612341	OR1S2	Q8NGQ3	325 aa		11.27	□□□□□ -0.61
SMTN-222	ENST00000612341	TMED6	Q8WW62	240 aa		11.27	□□□□□ -0.61
SMTN-222	ENST00000612341	ASB13	Q8WXK3	278 aa		11.27	□□□□□ -0.61
SMTN-222	ENST00000612341	OR10C1	Q96KK4	312 aa		11.27	□□□□□ -0.61
SMTN-222	ENST00000612341	RTBDN	Q9BSG5	229 aa	Predicted RBP	11.27	□□□□□ -0.61
SMTN-222	ENST00000612341	FAAP24	Q9BTP7	215 aa		11.27	□□□□□ -0.61
SMTN-222	ENST00000612341	OR5AC2	Q9NZP5	309 aa		11.27	□□□□□ -0.61
SMTN-222	ENST00000612341	CBY1	Q9Y3M2	126 aa		11.27	□□□□□ -0.61
SMTN-222	ENST00000612341	FLVCR1	Q9Y5Y0	555 aa		11.27	□□□□□ -0.61
SMTN-222	ENST00000612341	DOCK7	Q96N67	2140 aa		11.27	□□□□□ -0.61
SMTN-222	ENST00000612341	FBP1	P09467	338 aa		11.27	□□□□□ -0.61
SMTN-222	ENST00000612341	TBP	P20226	339 aa		11.27	□□□□□ -0.61
SMTN-222	ENST00000612341	GSK3A	P49840	483 aa		11.27	□□□□□ -0.61
SMTN-222	ENST00000612341	TCEAL6	Q6IPX3	200 aa		11.27	□□□□□ -0.61
SMTN-222	ENST00000612341	DRAM2	Q6UX65	266 aa		11.27	□□□□□ -0.61
SMTN-222	ENST00000612341	DPPA2	Q7Z7J5	298 aa		11.27	□□□□□ -0.61
SMTN-222	ENST00000612341	TMEM17	Q86X19	198 aa		11.27	□□□□□ -0.61
SMTN-222	ENST00000612341	ARRDC1	Q8N5I2	433 aa		11.27	□□□□□ -0.61
SMTN-222	ENST00000612341	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	11.27	□□□□□ -0.61
SMTN-222	ENST00000612341	SPTSSA	Q969W0	71 aa		11.27	□□□□□ -0.61
SMTN-222	ENST00000612341	ADAT1	Q9BUB4	502 aa	Known RBP	11.27	□□□□□ -0.61
SMTN-222	ENST00000612341	NKX6-2	Q9C056	277 aa	Predicted RBP	11.27	□□□□□ -0.61
SMTN-222	ENST00000612341	ZNF700	Q9H0M5	742 aa		11.27	□□□□□ -0.61
SMTN-222	ENST00000612341	FBLN5	Q9UBX5	448 aa		11.27	□□□□□ -0.61
SMTN-222	ENST00000612341	PCDHB10	Q9UN67	800 aa		11.27	□□□□□ -0.61
SMTN-222	ENST00000612341	CSTB	P04080	98 aa	Known RBP	11.26	□□□□□ -0.61
SMTN-222	ENST00000612341		P04436	131 aa		11.26	□□□□□ -0.61
SMTN-222	ENST00000612341	CNR1	P21554	472 aa		11.26	□□□□□ -0.61
SMTN-222	ENST00000612341	HOXA6	P31267	233 aa		11.26	□□□□□ -0.61
SMTN-222	ENST00000612341	CARD18	P57730	90 aa		11.26	□□□□□ -0.61
SMTN-222	ENST00000612341	TAS2R31	P59538	309 aa		11.26	□□□□□ -0.61
SMTN-222	ENST00000612341	HGFAC	Q04756	655 aa		11.26	□□□□□ -0.61
SMTN-222	ENST00000612341	AADACL3	Q5VUY0	350 aa		11.26	□□□□□ -0.61
SMTN-222	ENST00000612341	BPIFC	Q8NFQ6	507 aa		11.26	□□□□□ -0.61
SMTN-222	ENST00000612341	TOMM40L	Q969M1	308 aa		11.26	□□□□□ -0.61
SMTN-222	ENST00000612341	NECAB3	Q96P71	396 aa	Predicted RBP	11.26	□□□□□ -0.61
SMTN-222	ENST00000612341	RNF126	Q9BV68	326 aa		11.26	□□□□□ -0.61
SMTN-222	ENST00000612341	SPTBN2	O15020	2390 aa		11.26	□□□□□ -0.61
SMTN-222	ENST00000612341		A0A087WZY1	265 aa		11.26	□□□□□ -0.61
SMTN-222	ENST00000612341	ZNF729	A6NN14	1252 aa	Predicted RBP	11.26	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms