RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 C1orf174Q8IYL3 243 aa9.73□□□□□ -0.85
LINC00539-204ENST00000608957 NKAIN3Q8N8D7 197 aa9.73□□□□□ -0.85
LINC00539-204ENST00000608957 ACOT12Q8WYK0 555 aa9.73□□□□□ -0.85
LINC00539-204ENST00000608957 SPSB4Q96A44 273 aa9.73□□□□□ -0.85
LINC00539-204ENST00000608957 C10orf35Q96D05 121 aa9.73□□□□□ -0.85
LINC00539-204ENST00000608957 HAVCR1Q96D42 359 aa9.73□□□□□ -0.85
LINC00539-204ENST00000608957 SLC30A2Q9BRI3 323 aa9.73□□□□□ -0.85
LINC00539-204ENST00000608957 OPA3Q9H6K4 179 aa9.73□□□□□ -0.85
LINC00539-204ENST00000608957 LPAR2Q9HBW0 351 aa9.73□□□□□ -0.85
LINC00539-204ENST00000608957 DECR2Q9NUI1 292 aa9.73□□□□□ -0.85
LINC00539-204ENST00000608957 PTTG3PQ9NZH4 202 aa9.73□□□□□ -0.85
LINC00539-204ENST00000608957 DAPK2Q9UIK4 370 aa9.73□□□□□ -0.85
LINC00539-204ENST00000608957 PEX16Q9Y5Y5 336 aa9.73□□□□□ -0.85
LINC00539-204ENST00000608957 V9GY05 133 aa9.73□□□□□ -0.85
LINC00539-204ENST00000608957 COL6A5A8TX70 2615 aa9.73□□□□□ -0.85
LINC00539-204ENST00000608957 MEGF11A6BM72 1044 aa9.72□□□□□ -0.85
LINC00539-204ENST00000608957 A6NIN4 97 aa9.72□□□□□ -0.85
LINC00539-204ENST00000608957 IFITM5A6NNB3 132 aa9.72□□□□□ -0.85
LINC00539-204ENST00000608957 J3QW42 95 aa9.72□□□□□ -0.85
LINC00539-204ENST00000608957 TPD52L2O43399 206 aaKnown RBP9.72□□□□□ -0.85
LINC00539-204ENST00000608957 TMEM127O75204 238 aa9.72□□□□□ -0.85
LINC00539-204ENST00000608957 SRD5A1P18405 259 aa9.72□□□□□ -0.85
LINC00539-204ENST00000608957 ATF1P18846 271 aa9.72□□□□□ -0.85
LINC00539-204ENST00000608957 S100A5P33763 92 aa9.72□□□□□ -0.85
LINC00539-204ENST00000608957 THBS2P35442 1172 aa9.72□□□□□ -0.85
LINC00539-204ENST00000608957 DDOSTP39656 456 aa9.72□□□□□ -0.85
LINC00539-204ENST00000608957 BMXP51813 675 aa9.72□□□□□ -0.85
LINC00539-204ENST00000608957 DVL1P1P54792 670 aaPredicted RBP9.72□□□□□ -0.85
LINC00539-204ENST00000608957 PRSS12P56730 875 aa9.72□□□□□ -0.85
LINC00539-204ENST00000608957 ZNF92Q03936 586 aa9.72□□□□□ -0.85
LINC00539-204ENST00000608957 MALLQ13021 153 aa9.72□□□□□ -0.85
LINC00539-204ENST00000608957 OR8B8Q15620 311 aa9.72□□□□□ -0.85
LINC00539-204ENST00000608957 DDI2Q5TDH0 399 aa9.72□□□□□ -0.85
LINC00539-204ENST00000608957 ZNF529Q6P280 563 aa9.72□□□□□ -0.85
LINC00539-204ENST00000608957 MZT2AQ6P582 158 aa9.72□□□□□ -0.85
LINC00539-204ENST00000608957 MRPL21Q7Z2W9 205 aaKnown RBP9.72□□□□□ -0.85
LINC00539-204ENST00000608957 OR5AS1Q8N127 324 aa9.72□□□□□ -0.85
LINC00539-204ENST00000608957 DNAAF1Q8NEP3 725 aa9.72□□□□□ -0.85
LINC00539-204ENST00000608957 SEMA6DQ8NFY4 1073 aa9.72□□□□□ -0.85
LINC00539-204ENST00000608957 OR1M1Q8NGA1 313 aa9.72□□□□□ -0.85
LINC00539-204ENST00000608957 OR51A2Q8NGJ7 313 aa9.72□□□□□ -0.85
LINC00539-204ENST00000608957 OR5D14Q8NGL3 314 aa9.72□□□□□ -0.85
LINC00539-204ENST00000608957 ELMOD3Q96FG2 381 aa9.72□□□□□ -0.85
LINC00539-204ENST00000608957 CHST5Q9GZS9 411 aa9.72□□□□□ -0.85
LINC00539-204ENST00000608957 ZCCHC4Q9H5U6 513 aa9.72□□□□□ -0.85
LINC00539-204ENST00000608957 ZNF665Q9H7R5 613 aa9.72□□□□□ -0.85
LINC00539-204ENST00000608957 CYSLTR2Q9NS75 346 aa9.72□□□□□ -0.85
LINC00539-204ENST00000608957 PIGLQ9Y2B2 252 aa9.72□□□□□ -0.85
LINC00539-204ENST00000608957 MXRA5Q9NR99 2828 aa9.71□□□□□ -0.85
LINC00539-204ENST00000608957 PLSCR5A0PG75 271 aa9.71□□□□□ -0.86
LINC00539-204ENST00000608957 B4DSR2 109 aa9.71□□□□□ -0.86
LINC00539-204ENST00000608957 CLDN25C9JDP6 229 aa9.71□□□□□ -0.86
LINC00539-204ENST00000608957 H0YL77 283 aa9.71□□□□□ -0.86
LINC00539-204ENST00000608957 CTDSP2O14595 271 aa9.71□□□□□ -0.86
LINC00539-204ENST00000608957 RGS5O15539 181 aa9.71□□□□□ -0.86
LINC00539-204ENST00000608957 PHF1O43189 567 aaPredicted RBP9.71□□□□□ -0.86
LINC00539-204ENST00000608957 SULT1B1O43704 296 aa9.71□□□□□ -0.86
LINC00539-204ENST00000608957 IFNA2P01563 188 aa9.71□□□□□ -0.86
LINC00539-204ENST00000608957 IGHV2-5P01817 119 aa9.71□□□□□ -0.86
LINC00539-204ENST00000608957 SLC2A2P11168 524 aaPredicted RBP9.71□□□□□ -0.86
LINC00539-204ENST00000608957 FAHP16930 419 aa9.71□□□□□ -0.86
LINC00539-204ENST00000608957 RAB3AP20336 220 aa9.71□□□□□ -0.86
LINC00539-204ENST00000608957 ACKR3P25106 362 aa9.71□□□□□ -0.86
LINC00539-204ENST00000608957 CFPP27918 469 aa9.71□□□□□ -0.86
LINC00539-204ENST00000608957 BDKRB2P30411 391 aa9.71□□□□□ -0.86
LINC00539-204ENST00000608957 MAP2K3P46734 347 aa9.71□□□□□ -0.86
LINC00539-204ENST00000608957 GSK3AP49840 483 aa9.71□□□□□ -0.86
LINC00539-204ENST00000608957 TNFAIP6P98066 277 aaPredicted RBP9.71□□□□□ -0.86
LINC00539-204ENST00000608957 FAM3AP98173 230 aa9.71□□□□□ -0.86
LINC00539-204ENST00000608957 RIPPLY1Q0D2K3 151 aa9.71□□□□□ -0.86
LINC00539-204ENST00000608957 HES5Q5TA89 166 aa9.71□□□□□ -0.86
LINC00539-204ENST00000608957 ZBTB37Q5TC79 503 aa9.71□□□□□ -0.86
LINC00539-204ENST00000608957 GLT8D1Q68CQ7 371 aa9.71□□□□□ -0.86
LINC00539-204ENST00000608957 OR2T2Q6IF00 324 aa9.71□□□□□ -0.86
LINC00539-204ENST00000608957 FBXW12Q6X9E4 464 aa9.71□□□□□ -0.86
LINC00539-204ENST00000608957 C1orf229Q6ZS94 237 aaPredicted RBP9.71□□□□□ -0.86
LINC00539-204ENST00000608957 LAX1Q8IWV1 398 aa9.71□□□□□ -0.86
LINC00539-204ENST00000608957 OR5L1Q8NGL2 311 aa9.71□□□□□ -0.86
LINC00539-204ENST00000608957 OR13C9Q8NGT0 318 aa9.71□□□□□ -0.86
LINC00539-204ENST00000608957 ITLN1Q8WWA0 313 aa9.71□□□□□ -0.86
LINC00539-204ENST00000608957 S100ZQ8WXG8 99 aa9.71□□□□□ -0.86
LINC00539-204ENST00000608957 PP6455Q8WZ26 134 aa9.71□□□□□ -0.86
LINC00539-204ENST00000608957 CCL17Q92583 94 aa9.71□□□□□ -0.86
LINC00539-204ENST00000608957 CEP19Q96LK0 163 aa9.71□□□□□ -0.86
LINC00539-204ENST00000608957 WDFY2Q96P53 400 aa9.71□□□□□ -0.86
LINC00539-204ENST00000608957 AKIP1Q9NQ31 210 aa9.71□□□□□ -0.86
LINC00539-204ENST00000608957 ABRACLQ9P1F3 81 aa9.71□□□□□ -0.86
LINC00539-204ENST00000608957 COMMD3Q9UBI1 195 aa9.71□□□□□ -0.86
LINC00539-204ENST00000608957 CGGBP1Q9UFW8 167 aaPredicted RBP9.71□□□□□ -0.86
LINC00539-204ENST00000608957 ZDHHC8Q9ULC8 765 aa9.71□□□□□ -0.86
LINC00539-204ENST00000608957 SLC17A2O00624 439 aa9.7□□□□□ -0.86
LINC00539-204ENST00000608957 MLNRO43193 412 aa9.7□□□□□ -0.86
LINC00539-204ENST00000608957 AVPP01185 164 aa9.7□□□□□ -0.86
LINC00539-204ENST00000608957 IGHV2-70P01814 119 aa9.7□□□□□ -0.86
LINC00539-204ENST00000608957 MSMBP08118 114 aa9.7□□□□□ -0.86
LINC00539-204ENST00000608957 RAC2P15153 192 aa9.7□□□□□ -0.86
LINC00539-204ENST00000608957 TUBG1P23258 451 aa9.7□□□□□ -0.86
LINC00539-204ENST00000608957 GK2Q14410 553 aaPredicted RBP9.7□□□□□ -0.86
LINC00539-204ENST00000608957 HFEQ30201 348 aa9.7□□□□□ -0.86
LINC00539-204ENST00000608957 UTS2BQ765I0 119 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms