RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 SPG11Q96JI7 2443 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 TRAV1-2A0A0B4J238 106 aa6.47□□□□□ -1.37
MSH6-211ENST00000606499 IGKV1-12A0A0C4DH73 117 aa6.47□□□□□ -1.37
MSH6-211ENST00000606499 F8VVB4 439 aa6.47□□□□□ -1.37
MSH6-211ENST00000606499 F8VWA3 439 aa6.47□□□□□ -1.37
MSH6-211ENST00000606499 WNT9BO14905 357 aa6.47□□□□□ -1.37
MSH6-211ENST00000606499 AKR7A2O43488 359 aa6.47□□□□□ -1.37
MSH6-211ENST00000606499 CDRT1O95170 752 aa6.47□□□□□ -1.37
MSH6-211ENST00000606499 ZNF205O95201 554 aa6.47□□□□□ -1.37
MSH6-211ENST00000606499 IGKV1D-12P01611 117 aa6.47□□□□□ -1.37
MSH6-211ENST00000606499 ALDOBP05062 364 aa6.47□□□□□ -1.37
MSH6-211ENST00000606499 TMEM225BP0DP42 221 aa6.47□□□□□ -1.37
MSH6-211ENST00000606499 EGR1P18146 543 aa6.47□□□□□ -1.37
MSH6-211ENST00000606499 RAB3BP20337 219 aa6.47□□□□□ -1.37
MSH6-211ENST00000606499 MPZP25189 248 aa6.47□□□□□ -1.37
MSH6-211ENST00000606499 CD80P33681 288 aa6.47□□□□□ -1.37
MSH6-211ENST00000606499 SDC2P34741 201 aa6.47□□□□□ -1.37
MSH6-211ENST00000606499 ZNF93P35789 620 aaPredicted RBP6.47□□□□□ -1.37
MSH6-211ENST00000606499 MTNR1BP49286 362 aa6.47□□□□□ -1.37
MSH6-211ENST00000606499 CAV3P56539 151 aa6.47□□□□□ -1.37
MSH6-211ENST00000606499 ZP1P60852 638 aa6.47□□□□□ -1.37
MSH6-211ENST00000606499 HFEQ30201 348 aa6.47□□□□□ -1.37
MSH6-211ENST00000606499 FAM201AQ5SY85 155 aa6.47□□□□□ -1.37
MSH6-211ENST00000606499 GDPGP1Q6ZNW5 385 aa6.47□□□□□ -1.37
MSH6-211ENST00000606499 C1QL2Q7Z5L3 287 aa6.47□□□□□ -1.37
MSH6-211ENST00000606499 GCSAMQ8N6F7 178 aa6.47□□□□□ -1.37
MSH6-211ENST00000606499 NKAIN3Q8N8D7 197 aa6.47□□□□□ -1.37
MSH6-211ENST00000606499 BOLLQ8N9W6 283 aaKnown RBP6.47□□□□□ -1.37
MSH6-211ENST00000606499 C19orf18Q8NEA5 215 aa6.47□□□□□ -1.37
MSH6-211ENST00000606499 OR4D6Q8NGJ1 314 aa6.47□□□□□ -1.37
MSH6-211ENST00000606499 NDNFQ8TB73 568 aa6.47□□□□□ -1.37
MSH6-211ENST00000606499 LRRC29Q8WV35 223 aa6.47□□□□□ -1.37
MSH6-211ENST00000606499 TNFAIP8L1Q8WVP5 186 aa6.47□□□□□ -1.37
MSH6-211ENST00000606499 RDH5Q92781 318 aa6.47□□□□□ -1.37
MSH6-211ENST00000606499 NINJ1Q92982 152 aa6.47□□□□□ -1.37
MSH6-211ENST00000606499 ISOC1Q96CN7 298 aa6.47□□□□□ -1.37
MSH6-211ENST00000606499 PKIBQ9C010 78 aa6.47□□□□□ -1.37
MSH6-211ENST00000606499 RBM38Q9H0Z9 239 aaKnown RBP6.47□□□□□ -1.37
MSH6-211ENST00000606499 CNTD2Q9H8S5 307 aa6.47□□□□□ -1.37
MSH6-211ENST00000606499 BARX1Q9HBU1 254 aaPredicted RBP6.47□□□□□ -1.37
MSH6-211ENST00000606499 TMEM106BQ9NUM4 274 aa6.47□□□□□ -1.37
MSH6-211ENST00000606499 EDARQ9UNE0 448 aa6.47□□□□□ -1.37
MSH6-211ENST00000606499 CEPT1Q9Y6K0 416 aa6.47□□□□□ -1.37
MSH6-211ENST00000606499 FLNAP21333 2647 aaKnown RBP6.46□□□□□ -1.37
MSH6-211ENST00000606499 IGHV3OR15-7A0A075B7D8 119 aa6.46□□□□□ -1.38
MSH6-211ENST00000606499 A0A0G2JK05 382 aa6.46□□□□□ -1.38
MSH6-211ENST00000606499 MEGF11A6BM72 1044 aa6.46□□□□□ -1.38
MSH6-211ENST00000606499 CCDC160A6NGH7 325 aa6.46□□□□□ -1.38
MSH6-211ENST00000606499 TRIM64BA6NI03 449 aa6.46□□□□□ -1.38
MSH6-211ENST00000606499 LRRC30A6NM36 301 aa6.46□□□□□ -1.38
MSH6-211ENST00000606499 CLDN25C9JDP6 229 aa6.46□□□□□ -1.38
MSH6-211ENST00000606499 H3BMQ9 156 aa6.46□□□□□ -1.38
MSH6-211ENST00000606499 TMEM178BH3BS89 294 aa6.46□□□□□ -1.38
MSH6-211ENST00000606499 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.46□□□□□ -1.38
MSH6-211ENST00000606499 PGA5P0DJD9 388 aa6.46□□□□□ -1.38
MSH6-211ENST00000606499 CALCBP10092 127 aa6.46□□□□□ -1.38
MSH6-211ENST00000606499 IRF2P14316 349 aa6.46□□□□□ -1.38
MSH6-211ENST00000606499 PTGFRP43088 359 aa6.46□□□□□ -1.38
MSH6-211ENST00000606499 NPBWR2P48146 333 aa6.46□□□□□ -1.38
MSH6-211ENST00000606499 SERPINB10P48595 397 aa6.46□□□□□ -1.38
MSH6-211ENST00000606499 TMBIM6P55061 237 aa6.46□□□□□ -1.38
MSH6-211ENST00000606499 MRPS11P82912 194 aaKnown RBP6.46□□□□□ -1.38
MSH6-211ENST00000606499 IL24Q13007 206 aa6.46□□□□□ -1.38
MSH6-211ENST00000606499 PDZK1IP1Q13113 114 aa6.46□□□□□ -1.38
MSH6-211ENST00000606499 SPCS2Q15005 226 aa6.46□□□□□ -1.38
MSH6-211ENST00000606499 P2RY14Q15391 338 aa6.46□□□□□ -1.38
MSH6-211ENST00000606499 AVPI1Q5T686 147 aa6.46□□□□□ -1.38
MSH6-211ENST00000606499 HES5Q5TA89 166 aa6.46□□□□□ -1.38
MSH6-211ENST00000606499 PNLDC1Q8NA58 520 aaKnown RBP6.46□□□□□ -1.38
MSH6-211ENST00000606499 POC1AQ8NBT0 407 aa6.46□□□□□ -1.38
MSH6-211ENST00000606499 OR11L1Q8NGX0 322 aa6.46□□□□□ -1.38
MSH6-211ENST00000606499 OR10K1Q8NGX5 313 aa6.46□□□□□ -1.38
MSH6-211ENST00000606499 OR51F2Q8NH61 342 aa6.46□□□□□ -1.38
MSH6-211ENST00000606499 Q8TCH9 128 aa6.46□□□□□ -1.38
MSH6-211ENST00000606499 RAB2BQ8WUD1 216 aa6.46□□□□□ -1.38
MSH6-211ENST00000606499 HPS1Q92902 700 aa6.46□□□□□ -1.38
MSH6-211ENST00000606499 ERGIC1Q969X5 290 aa6.46□□□□□ -1.38
MSH6-211ENST00000606499 SEH1LQ96EE3 360 aa6.46□□□□□ -1.38
MSH6-211ENST00000606499 CPNE2Q96FN4 548 aaPredicted RBP6.46□□□□□ -1.38
MSH6-211ENST00000606499 CEP19Q96LK0 163 aa6.46□□□□□ -1.38
MSH6-211ENST00000606499 NRIP2Q9BQI9 281 aa6.46□□□□□ -1.38
MSH6-211ENST00000606499 WDR13Q9H1Z4 485 aa6.46□□□□□ -1.38
MSH6-211ENST00000606499 KCNK15Q9H427 330 aa6.46□□□□□ -1.38
MSH6-211ENST00000606499 CHODLQ9H9P2 273 aa6.46□□□□□ -1.38
MSH6-211ENST00000606499 PLGRKTQ9HBL7 147 aa6.46□□□□□ -1.38
MSH6-211ENST00000606499 SMURF1Q9HCE7 757 aa6.46□□□□□ -1.38
MSH6-211ENST00000606499 DLL4Q9NR61 685 aa6.46□□□□□ -1.38
MSH6-211ENST00000606499 RBFOX1Q9NWB1 397 aaKnown RBP6.46□□□□□ -1.38
MSH6-211ENST00000606499 MTCH1Q9NZJ7 389 aa6.46□□□□□ -1.38
MSH6-211ENST00000606499 RNF7Q9UBF6 113 aa6.46□□□□□ -1.38
MSH6-211ENST00000606499 IL36RNQ9UBH0 155 aa6.46□□□□□ -1.38
MSH6-211ENST00000606499 MRPS28Q9Y2Q9 187 aaKnown RBP6.46□□□□□ -1.38
MSH6-211ENST00000606499 POLDIP2Q9Y2S7 368 aa6.46□□□□□ -1.38
MSH6-211ENST00000606499 IGHV4-30-2A0A087WSY4 118 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 A0A0B4J203 849 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 A0A1W2PP11 408 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 DPPA5A6NC42 116 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 IFITM5A6NNB3 132 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 CYSRT1A8MQ03 144 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 SRRM5B3KS81 715 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms