RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 TNFAIP8L1Q8WVP5 186 aa4.38□□□□□ -1.71
SPTBN1-206ENST00000602898 OR8D1Q8WZ84 308 aa4.38□□□□□ -1.71
SPTBN1-206ENST00000602898 PINX1Q96BK5 328 aaKnown RBP4.38□□□□□ -1.71
SPTBN1-206ENST00000602898 LRRC58Q96CX6 371 aa4.38□□□□□ -1.71
SPTBN1-206ENST00000602898 FCRL5Q96RD9 977 aa4.38□□□□□ -1.71
SPTBN1-206ENST00000602898 SLC25A31Q9H0C2 315 aa4.38□□□□□ -1.71
SPTBN1-206ENST00000602898 NOX3Q9HBY0 568 aa4.38□□□□□ -1.71
SPTBN1-206ENST00000602898 TMEM45AQ9NWC5 275 aa4.38□□□□□ -1.71
SPTBN1-206ENST00000602898 ZNF391Q9UJN7 358 aa4.38□□□□□ -1.71
SPTBN1-206ENST00000602898 NEU3Q9UQ49 428 aa4.38□□□□□ -1.71
SPTBN1-206ENST00000602898 COL4A5P29400 1685 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 DHRS7CA6NNS2 312 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 J3QR06 171 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 ZNF593O00488 134 aaPredicted RBP4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 GNGT2O14610 69 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 B4GALT3O60512 393 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 ADH4P08319 380 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 CD79AP11912 226 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 IL1RNP18510 177 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 CRYBB2P43320 205 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 KIR2DS4P43632 304 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 TAF6P49848 677 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 AKR1C2P52895 323 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 TMPRSS3P57727 454 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 HBA1P69905 142 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 AKR1C1Q04828 323 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 ST3GAL3Q11203 375 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 DOCK1Q14185 1865 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 RHEBQ15382 184 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 SNRNP35Q16560 246 aaKnown RBP4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 DCAF4L1Q3SXM0 396 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 C22orf42Q6IC83 251 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 FAM71E1Q6IPT2 247 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 CDC42EP5Q6NZY7 148 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 OR2Z1Q8NG97 314 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 OR5M3Q8NGP4 307 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 OR2A12Q8NGT7 310 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 CASTOR1Q8WTX7 329 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 ATXN7L3BQ96GX2 97 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 YPEL4Q96NS1 127 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 RAB11FIP5Q9BXF6 653 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 MAGIXQ9H6Y5 334 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 ZNF665Q9H7R5 613 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 EXOSC4Q9NPD3 245 aaKnown RBP4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 IL23AQ9NPF7 189 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 B3GAT1Q9P2W7 334 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 CACFD1Q9UGQ2 172 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 ST3GAL6Q9Y274 331 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 ARL5AQ9Y689 179 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 LRRC37A2A6NM11 1700 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 TRAV8-7A0A075B6U6 113 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 IDSB3KWA1 339 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 F8VVB4 439 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 F8VWA3 439 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 LAMTOR5O43504 91 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 HYAL3O43820 417 aaPredicted RBP4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 HIST1H2BKO60814 126 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 ENTPD6O75354 484 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 CDRT1O95170 752 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 HIST1H2BJP06899 126 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 NGFRP08138 427 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 HIST1H2BOP23527 126 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 HIST1H2BBP33778 126 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 SOX2P48431 317 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 TMEM50BP56557 158 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 LOXL3P58215 753 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 HIST1H2BDP58876 126 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 HIST1H2BCP62807 126 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 CRADDP78560 199 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 DUSP2Q05923 314 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 ZNF345Q14585 488 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 CDSNQ15517 529 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 HIST2H2BEQ16778 126 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 TCTN1Q2MV58 587 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 MORN2Q502X0 79 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 ASPRV1Q53RT3 343 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 LDLRAD2Q5SZI1 272 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 HENMT1Q5T8I9 393 aaKnown RBP4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 DNM1P34Q6PK57 102 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 SYT12Q8IV01 421 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 RNF149Q8NC42 400 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 OR4K5Q8NGD3 323 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 OR52E4Q8NGH9 312 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 OR1J2Q8NGS2 313 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 KIR2DL5BQ8NHK3 375 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 CRYGNQ8WXF5 182 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 HIST1H2BHQ93079 126 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 SFRP2Q96HF1 295 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 JSRP1Q96MG2 331 aaPredicted RBP4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 GFI1Q99684 422 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 HIST1H2BNQ99877 126 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 HIST1H2BMQ99879 126 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 ABHD14AQ9BUJ0 271 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 RPP25Q9BUL9 199 aaKnown RBP4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 NXF5Q9H1B4 397 aaKnown RBP4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 CXXC4Q9H2H0 198 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 MFSD1Q9H3U5 465 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 CDH20Q9HBT6 801 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 HEBP1Q9NRV9 189 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms