RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 TAAR3PQ9P1P4 343 aa8.61□□□□□ -1.03
UPF1-213ENST00000601981 NOP16Q9Y3C1 178 aaKnown RBP8.61□□□□□ -1.03
UPF1-213ENST00000601981 CREBBPQ92793 2442 aa8.61□□□□□ -1.03
UPF1-213ENST00000601981 POLQO75417 2590 aa8.61□□□□□ -1.03
UPF1-213ENST00000601981 FBN2P35556 2912 aa8.6□□□□□ -1.03
UPF1-213ENST00000601981 TMEM272A0A1B0GTI8 110 aa8.6□□□□□ -1.03
UPF1-213ENST00000601981 GGT3PA6NGU5 568 aa8.6□□□□□ -1.03
UPF1-213ENST00000601981 LDLRAD4O15165 306 aa8.6□□□□□ -1.03
UPF1-213ENST00000601981 BPNT1O95861 308 aa8.6□□□□□ -1.03
UPF1-213ENST00000601981 CD8AP01732 235 aa8.6□□□□□ -1.03
UPF1-213ENST00000601981 ARSBP15848 533 aa8.6□□□□□ -1.03
UPF1-213ENST00000601981 RAB6AP20340 208 aa8.6□□□□□ -1.03
UPF1-213ENST00000601981 KITLGP21583 273 aa8.6□□□□□ -1.03
UPF1-213ENST00000601981 TNFSF4P23510 183 aa8.6□□□□□ -1.03
UPF1-213ENST00000601981 CDKN1AP38936 164 aa8.6□□□□□ -1.03
UPF1-213ENST00000601981 MPV17P39210 176 aa8.6□□□□□ -1.03
UPF1-213ENST00000601981 GK2Q14410 553 aaPredicted RBP8.6□□□□□ -1.03
UPF1-213ENST00000601981 PCGF3Q3KNV8 242 aa8.6□□□□□ -1.03
UPF1-213ENST00000601981 C2orf76Q3KRA6 126 aa8.6□□□□□ -1.03
UPF1-213ENST00000601981 ZBTB37Q5TC79 503 aa8.6□□□□□ -1.03
UPF1-213ENST00000601981 GDPD3Q7L5L3 318 aa8.6□□□□□ -1.03
UPF1-213ENST00000601981 LRRC75A-AS1Q8N1F1 130 aa8.6□□□□□ -1.03
UPF1-213ENST00000601981 SEMA6DQ8NFY4 1073 aa8.6□□□□□ -1.03
UPF1-213ENST00000601981 OR52N4Q8NGI2 321 aa8.6□□□□□ -1.03
UPF1-213ENST00000601981 SMIM4Q8WVI0 70 aa8.6□□□□□ -1.03
UPF1-213ENST00000601981 SPSB4Q96A44 273 aa8.6□□□□□ -1.03
UPF1-213ENST00000601981 CMBLQ96DG6 245 aa8.6□□□□□ -1.03
UPF1-213ENST00000601981 ABHD1Q96SE0 405 aa8.6□□□□□ -1.03
UPF1-213ENST00000601981 DIRC2Q96SL1 478 aa8.6□□□□□ -1.03
UPF1-213ENST00000601981 GSX2Q9BZM3 304 aa8.6□□□□□ -1.03
UPF1-213ENST00000601981 SLC22A4Q9H015 551 aa8.6□□□□□ -1.03
UPF1-213ENST00000601981 FBLN5Q9UBX5 448 aa8.6□□□□□ -1.03
UPF1-213ENST00000601981 PURGQ9UJV8 347 aaKnown RBP8.6□□□□□ -1.03
UPF1-213ENST00000601981 ZDHHC8Q9ULC8 765 aa8.6□□□□□ -1.03
UPF1-213ENST00000601981 PIGLQ9Y2B2 252 aa8.6□□□□□ -1.03
UPF1-213ENST00000601981 hCG_2014768A0A024R1R8 64 aa8.59□□□□□ -1.03
UPF1-213ENST00000601981 A0A0A6YYH2 397 aa8.59□□□□□ -1.03
UPF1-213ENST00000601981 hCG_38984A0A1B0GV85 526 aa8.59□□□□□ -1.03
UPF1-213ENST00000601981 A6NIN4 97 aa8.59□□□□□ -1.03
UPF1-213ENST00000601981 A6NJ64 397 aa8.59□□□□□ -1.03
UPF1-213ENST00000601981 OVOL3O00110 214 aa8.59□□□□□ -1.03
UPF1-213ENST00000601981 MAGEB3O15480 346 aa8.59□□□□□ -1.03
UPF1-213ENST00000601981 XRCC3O43542 346 aa8.59□□□□□ -1.03
UPF1-213ENST00000601981 UBBP0CG47 229 aa8.59□□□□□ -1.03
UPF1-213ENST00000601981 PAX1P15863 534 aa8.59□□□□□ -1.03
UPF1-213ENST00000601981 FAHP16930 419 aa8.59□□□□□ -1.03
UPF1-213ENST00000601981 CDK2P24941 298 aa8.59□□□□□ -1.03
UPF1-213ENST00000601981 ZNF93P35789 620 aaPredicted RBP8.59□□□□□ -1.03
UPF1-213ENST00000601981 MAP2K3P46734 347 aa8.59□□□□□ -1.03
UPF1-213ENST00000601981 PTH2RP49190 550 aa8.59□□□□□ -1.03
UPF1-213ENST00000601981 INPP1P49441 399 aa8.59□□□□□ -1.03
UPF1-213ENST00000601981 ZNF81P51508 661 aa8.59□□□□□ -1.03
UPF1-213ENST00000601981 ATP5J2P56134 94 aa8.59□□□□□ -1.03
UPF1-213ENST00000601981 TAS2R20P59543 309 aa8.59□□□□□ -1.03
UPF1-213ENST00000601981 RIPPLY1Q0D2K3 151 aa8.59□□□□□ -1.03
UPF1-213ENST00000601981 PSG7Q13046 419 aa8.59□□□□□ -1.03
UPF1-213ENST00000601981 HLXQ14774 488 aaPredicted RBP8.59□□□□□ -1.03
UPF1-213ENST00000601981 OR8B8Q15620 311 aa8.59□□□□□ -1.03
UPF1-213ENST00000601981 MST1LQ2TV78 715 aa8.59□□□□□ -1.03
UPF1-213ENST00000601981 FAM209AQ5JX71 171 aa8.59□□□□□ -1.03
UPF1-213ENST00000601981 TMEM69Q5SWH9 247 aa8.59□□□□□ -1.03
UPF1-213ENST00000601981 MZT2BQ6NZ67 158 aa8.59□□□□□ -1.03
UPF1-213ENST00000601981 LRP11Q86VZ4 500 aa8.59□□□□□ -1.03
UPF1-213ENST00000601981 CSNK2A3Q8NEV1 391 aa8.59□□□□□ -1.03
UPF1-213ENST00000601981 OR4D6Q8NGJ1 314 aa8.59□□□□□ -1.03
UPF1-213ENST00000601981 OR2AE1Q8NHA4 323 aa8.59□□□□□ -1.03
UPF1-213ENST00000601981 NEU4Q8WWR8 484 aaPredicted RBP8.59□□□□□ -1.03
UPF1-213ENST00000601981 IGFBPL1Q8WX77 278 aa8.59□□□□□ -1.03
UPF1-213ENST00000601981 YIPF5Q969M3 257 aa8.59□□□□□ -1.03
UPF1-213ENST00000601981 CPNE2Q96FN4 548 aaPredicted RBP8.59□□□□□ -1.03
UPF1-213ENST00000601981 PERPQ96FX8 193 aa8.59□□□□□ -1.03
UPF1-213ENST00000601981 THAP7Q9BT49 309 aaPredicted RBP8.59□□□□□ -1.03
UPF1-213ENST00000601981 REPIN1Q9BWE0 567 aaKnown RBP8.59□□□□□ -1.03
UPF1-213ENST00000601981 C11orf54Q9H0W9 315 aaPredicted RBP8.59□□□□□ -1.03
UPF1-213ENST00000601981 CNTD2Q9H8S5 307 aa8.59□□□□□ -1.03
UPF1-213ENST00000601981 NEK6Q9HC98 313 aa8.59□□□□□ -1.03
UPF1-213ENST00000601981 MYOZ1Q9NP98 299 aaPredicted RBP8.59□□□□□ -1.03
UPF1-213ENST00000601981 DIABLOQ9NR28 239 aa8.59□□□□□ -1.03
UPF1-213ENST00000601981 ZNF701Q9NV72 531 aaPredicted RBP8.59□□□□□ -1.03
UPF1-213ENST00000601981 PDZD2O15018 2839 aa8.59□□□□□ -1.03
UPF1-213ENST00000601981 CELSR1Q9NYQ6 3014 aa8.58□□□□□ -1.04
UPF1-213ENST00000601981 IGKV1-9A0A0C4DH69 117 aa8.58□□□□□ -1.04
UPF1-213ENST00000601981 ANKRD30BLA7E2S9 258 aa8.58□□□□□ -1.04
UPF1-213ENST00000601981 C17orf100A8MU93 164 aa8.58□□□□□ -1.04
UPF1-213ENST00000601981 IQCF6A8MYZ5 107 aa8.58□□□□□ -1.04
UPF1-213ENST00000601981 GABARAPH6UMI1 98 aa8.58□□□□□ -1.04
UPF1-213ENST00000601981 PLA2G10O15496 165 aa8.58□□□□□ -1.04
UPF1-213ENST00000601981 TPD52L2O43399 206 aaKnown RBP8.58□□□□□ -1.04
UPF1-213ENST00000601981 SCGNO76038 276 aa8.58□□□□□ -1.04
UPF1-213ENST00000601981 HCKP08631 526 aa8.58□□□□□ -1.04
UPF1-213ENST00000601981 SPNP16150 400 aa8.58□□□□□ -1.04
UPF1-213ENST00000601981 ACKR3P25106 362 aa8.58□□□□□ -1.04
UPF1-213ENST00000601981 ALDH3B1P43353 468 aa8.58□□□□□ -1.04
UPF1-213ENST00000601981 RFX2P48378 723 aa8.58□□□□□ -1.04
UPF1-213ENST00000601981 GSK3AP49840 483 aa8.58□□□□□ -1.04
UPF1-213ENST00000601981 EFNA4P52798 201 aa8.58□□□□□ -1.04
UPF1-213ENST00000601981 EFNB2P52799 333 aa8.58□□□□□ -1.04
UPF1-213ENST00000601981 DGCR2P98153 550 aa8.58□□□□□ -1.04
UPF1-213ENST00000601981 FAM3AP98173 230 aa8.58□□□□□ -1.04
UPF1-213ENST00000601981 ZNF92Q03936 586 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms