RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, human

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM1-223	ENST00000600523	NXPH2	O95156	264 aa		10.89	□□□□□ -0.67
SRRM1-223	ENST00000600523	GYPA	P02724	150 aa		10.89	□□□□□ -0.67
SRRM1-223	ENST00000600523	WNT2	P09544	360 aa		10.89	□□□□□ -0.67
SRRM1-223	ENST00000600523	RAB3A	P20336	220 aa		10.89	□□□□□ -0.67
SRRM1-223	ENST00000600523	AZGP1	P25311	298 aa	Known RBP	10.89	□□□□□ -0.67
SRRM1-223	ENST00000600523	MAPK3	P27361	379 aa	Predicted RBP	10.89	□□□□□ -0.67
SRRM1-223	ENST00000600523	SOX2	P48431	317 aa		10.89	□□□□□ -0.67
SRRM1-223	ENST00000600523	LCN2	P80188	198 aa		10.89	□□□□□ -0.67
SRRM1-223	ENST00000600523	KRTAP1-1	Q07627	177 aa		10.89	□□□□□ -0.67
SRRM1-223	ENST00000600523	IL24	Q13007	206 aa		10.89	□□□□□ -0.67
SRRM1-223	ENST00000600523	UBE2V2	Q15819	145 aa		10.89	□□□□□ -0.67
SRRM1-223	ENST00000600523	CHRFAM7A	Q494W8	412 aa		10.89	□□□□□ -0.67
SRRM1-223	ENST00000600523	DCAF12L2	Q5VW00	463 aa		10.89	□□□□□ -0.67
SRRM1-223	ENST00000600523	FAHD2B	Q6P2I3	314 aa	Predicted RBP	10.89	□□□□□ -0.67
SRRM1-223	ENST00000600523		Q8IYB0	196 aa		10.89	□□□□□ -0.67
SRRM1-223	ENST00000600523	MS4A15	Q8N5U1	240 aa		10.89	□□□□□ -0.67
SRRM1-223	ENST00000600523	PARP16	Q8N5Y8	322 aa		10.89	□□□□□ -0.67
SRRM1-223	ENST00000600523	C19orf18	Q8NEA5	215 aa		10.89	□□□□□ -0.67
SRRM1-223	ENST00000600523	OR51A4	Q8NGJ6	313 aa		10.89	□□□□□ -0.67
SRRM1-223	ENST00000600523	OR13C9	Q8NGT0	318 aa		10.89	□□□□□ -0.67
SRRM1-223	ENST00000600523	UFD1	Q92890	307 aa		10.89	□□□□□ -0.67
SRRM1-223	ENST00000600523	TMEM106A	Q96A25	262 aa		10.89	□□□□□ -0.67
SRRM1-223	ENST00000600523	FAHD2A	Q96GK7	314 aa		10.89	□□□□□ -0.67
SRRM1-223	ENST00000600523	YTHDF1	Q9BYJ9	559 aa	Known RBP	10.89	□□□□□ -0.67
SRRM1-223	ENST00000600523	DNTTIP1	Q9H147	329 aa		10.89	□□□□□ -0.67
SRRM1-223	ENST00000600523	IGHV3OR15-7	A0A075B7D8	119 aa		10.88	□□□□□ -0.67
SRRM1-223	ENST00000600523	PPIAL4C	A0A0B4J2A2	164 aa		10.88	□□□□□ -0.67
SRRM1-223	ENST00000600523	PNMA8C	A0A1B0GUJ8	204 aa		10.88	□□□□□ -0.67
SRRM1-223	ENST00000600523	INAFM1	C9JVW0	142 aa		10.88	□□□□□ -0.67
SRRM1-223	ENST00000600523		J3QLI3	93 aa		10.88	□□□□□ -0.67
SRRM1-223	ENST00000600523	NDUFB3	O43676	98 aa		10.88	□□□□□ -0.67
SRRM1-223	ENST00000600523	ALX3	O95076	343 aa		10.88	□□□□□ -0.67
SRRM1-223	ENST00000600523	CD1A	P06126	327 aa		10.88	□□□□□ -0.67
SRRM1-223	ENST00000600523	HSMCR30	P0CW71	290 aa		10.88	□□□□□ -0.67
SRRM1-223	ENST00000600523	GABARAPL2	P60520	117 aa		10.88	□□□□□ -0.67
SRRM1-223	ENST00000600523	ACSM1	Q08AH1	577 aa		10.88	□□□□□ -0.67
SRRM1-223	ENST00000600523	SCGB2A2	Q13296	93 aa		10.88	□□□□□ -0.67
SRRM1-223	ENST00000600523		Q499Y3	187 aa		10.88	□□□□□ -0.67
SRRM1-223	ENST00000600523	LRRC10	Q5BKY1	277 aa		10.88	□□□□□ -0.67
SRRM1-223	ENST00000600523	XAF1	Q6GPH4	301 aa		10.88	□□□□□ -0.67
SRRM1-223	ENST00000600523	BTNL3	Q6UXE8	466 aa		10.88	□□□□□ -0.67
SRRM1-223	ENST00000600523	FAM90A1	Q86YD7	464 aa		10.88	□□□□□ -0.67
SRRM1-223	ENST00000600523	SVOP	Q8N4V2	548 aa		10.88	□□□□□ -0.67
SRRM1-223	ENST00000600523	ZFP41	Q8N8Y5	198 aa		10.88	□□□□□ -0.67
SRRM1-223	ENST00000600523	POC1A	Q8NBT0	407 aa		10.88	□□□□□ -0.67
SRRM1-223	ENST00000600523	OR10AC1	Q8NH08	325 aa		10.88	□□□□□ -0.67
SRRM1-223	ENST00000600523	RPS4Y2	Q8TD47	263 aa		10.88	□□□□□ -0.67
SRRM1-223	ENST00000600523	MED30	Q96HR3	178 aa		10.88	□□□□□ -0.67
SRRM1-223	ENST00000600523	GPER1	Q99527	375 aa		10.88	□□□□□ -0.67
SRRM1-223	ENST00000600523	NLK	Q9UBE8	527 aa		10.88	□□□□□ -0.67
SRRM1-223	ENST00000600523	GLS2	Q9UI32	602 aa		10.88	□□□□□ -0.67
SRRM1-223	ENST00000600523	OR2AT4	A6NND4	320 aa		10.87	□□□□□ -0.67
SRRM1-223	ENST00000600523		F5H0A9	414 aa	Predicted RBP	10.87	□□□□□ -0.67
SRRM1-223	ENST00000600523	TRAPPC2L	H3BP13	241 aa		10.87	□□□□□ -0.67
SRRM1-223	ENST00000600523	GPR37	O15354	613 aa		10.87	□□□□□ -0.67
SRRM1-223	ENST00000600523	RHBDL1	O75783	438 aa		10.87	□□□□□ -0.67
SRRM1-223	ENST00000600523	ECD	O95905	644 aa	Predicted RBP	10.87	□□□□□ -0.67
SRRM1-223	ENST00000600523	LALBA	P00709	142 aa		10.87	□□□□□ -0.67
SRRM1-223	ENST00000600523	PLAT	P00750	562 aa		10.87	□□□□□ -0.67
SRRM1-223	ENST00000600523	MT-ND2	P03891	347 aa		10.87	□□□□□ -0.67
SRRM1-223	ENST00000600523	ACAA1	P09110	424 aa	Predicted RBP	10.87	□□□□□ -0.67
SRRM1-223	ENST00000600523	PGA5	P0DJD9	388 aa		10.87	□□□□□ -0.67
SRRM1-223	ENST00000600523	EGR1	P18146	543 aa		10.87	□□□□□ -0.67
SRRM1-223	ENST00000600523	MPZ	P25189	248 aa		10.87	□□□□□ -0.67
SRRM1-223	ENST00000600523	SRP14	P37108	136 aa	Known RBP	10.87	□□□□□ -0.67
SRRM1-223	ENST00000600523	GABRA2	P47869	451 aa		10.87	□□□□□ -0.67
SRRM1-223	ENST00000600523	POU3F4	P49335	361 aa		10.87	□□□□□ -0.67
SRRM1-223	ENST00000600523	IL13RA1	P78552	427 aa		10.87	□□□□□ -0.67
SRRM1-223	ENST00000600523	HNRNPA0	Q13151	305 aa	Known RBP	10.87	□□□□□ -0.67
SRRM1-223	ENST00000600523	GPR50	Q13585	617 aa		10.87	□□□□□ -0.67
SRRM1-223	ENST00000600523	TRAM1	Q15629	374 aa		10.87	□□□□□ -0.67
SRRM1-223	ENST00000600523	CR1L	Q2VPA4	569 aa		10.87	□□□□□ -0.67
SRRM1-223	ENST00000600523	C11orf91	Q3C1V1	193 aa		10.87	□□□□□ -0.67
SRRM1-223	ENST00000600523	SLC25A26	Q70HW3	274 aa		10.87	□□□□□ -0.67
SRRM1-223	ENST00000600523	ANGPTL5	Q86XS5	388 aa		10.87	□□□□□ -0.67
SRRM1-223	ENST00000600523	PNLDC1	Q8NA58	520 aa	Known RBP	10.87	□□□□□ -0.67
SRRM1-223	ENST00000600523	ZNF485	Q8NCK3	441 aa		10.87	□□□□□ -0.67
SRRM1-223	ENST00000600523	CEP19	Q96LK0	163 aa		10.87	□□□□□ -0.67
SRRM1-223	ENST00000600523	S100A13	Q99584	98 aa		10.87	□□□□□ -0.67
SRRM1-223	ENST00000600523	MRI1	Q9BV20	369 aa		10.87	□□□□□ -0.67
SRRM1-223	ENST00000600523	FGF23	Q9GZV9	251 aa	Predicted RBP	10.87	□□□□□ -0.67
SRRM1-223	ENST00000600523	SNTG1	Q9NSN8	517 aa		10.87	□□□□□ -0.67
SRRM1-223	ENST00000600523	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	10.87	□□□□□ -0.67
SRRM1-223	ENST00000600523	HIVEP2	P31629	2446 aa		10.87	□□□□□ -0.67
SRRM1-223	ENST00000600523	LOC105371242	A0A075B767	164 aa		10.86	□□□□□ -0.67
SRRM1-223	ENST00000600523		A8MXK9	166 aa		10.86	□□□□□ -0.67
SRRM1-223	ENST00000600523	PHF1	O43189	567 aa	Predicted RBP	10.86	□□□□□ -0.67
SRRM1-223	ENST00000600523	SYNGR1	O43759	233 aa		10.86	□□□□□ -0.67
SRRM1-223	ENST00000600523	NOS1AP	O75052	506 aa	Predicted RBP	10.86	□□□□□ -0.67
SRRM1-223	ENST00000600523	PSMA1	P25786	263 aa	Known RBP	10.86	□□□□□ -0.67
SRRM1-223	ENST00000600523	RIPPLY3	P57055	190 aa		10.86	□□□□□ -0.67
SRRM1-223	ENST00000600523	FAM120AOS	Q5T036	256 aa		10.86	□□□□□ -0.67
SRRM1-223	ENST00000600523	SATL1	Q86VE3	508 aa		10.86	□□□□□ -0.67
SRRM1-223	ENST00000600523	CALHM1	Q8IU99	346 aa		10.86	□□□□□ -0.67
SRRM1-223	ENST00000600523	CCL13	Q99616	98 aa		10.86	□□□□□ -0.67
SRRM1-223	ENST00000600523	NRIP2	Q9BQI9	281 aa		10.86	□□□□□ -0.67
SRRM1-223	ENST00000600523	WDR13	Q9H1Z4	485 aa		10.86	□□□□□ -0.67
SRRM1-223	ENST00000600523	RHOF	Q9HBH0	211 aa		10.86	□□□□□ -0.67
SRRM1-223	ENST00000600523	ISYNA1	Q9NPH2	558 aa		10.86	□□□□□ -0.67
SRRM1-223	ENST00000600523	TMEM138	Q9NPI0	162 aa		10.86	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms